RNA–Protein interactions for RNA: ENST00000002829.7

SEMA3F-201, Transcript of semaphorin 3F, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SEMA3F, Length 3,802 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3F-201ENST00000002829 KRTCAP2Q8N6L1 136 aa13.4□□□□□ -0.26
SEMA3F-201ENST00000002829 LINC01465Q8N7H1 131 aa13.4□□□□□ -0.26
SEMA3F-201ENST00000002829 TRPV1Q8NER1 839 aa13.4□□□□□ -0.26
SEMA3F-201ENST00000002829 OR2T12Q8NG77 320 aa13.4□□□□□ -0.26
SEMA3F-201ENST00000002829 ZFYVE1Q9HBF4 777 aa13.4□□□□□ -0.26
SEMA3F-201ENST00000002829 LEF1Q9UJU2 399 aaPredicted RBP13.4□□□□□ -0.26
SEMA3F-201ENST00000002829 SLC8A2Q9UPR5 921 aa13.4□□□□□ -0.26
SEMA3F-201ENST00000002829 PRKAB1Q9Y478 270 aa13.4□□□□□ -0.26
SEMA3F-201ENST00000002829 TRIP12Q14669 1992 aaPredicted RBP13.4□□□□□ -0.26
SEMA3F-201ENST00000002829 TAF4O00268 1085 aa13.4□□□□□ -0.26
SEMA3F-201ENST00000002829 UBFD1O14562 309 aaKnown RBP13.4□□□□□ -0.26
SEMA3F-201ENST00000002829 TSC22D2O75157 780 aa13.4□□□□□ -0.26
SEMA3F-201ENST00000002829 BCAS2O75934 225 aaPredicted RBP13.4□□□□□ -0.26
SEMA3F-201ENST00000002829 RECQL5O94762 991 aaPredicted RBP13.4□□□□□ -0.26
SEMA3F-201ENST00000002829 CKBP12277 381 aa13.4□□□□□ -0.26
SEMA3F-201ENST00000002829 RCVRNP35243 200 aa13.4□□□□□ -0.26
SEMA3F-201ENST00000002829 BMXP51813 675 aa13.4□□□□□ -0.26
SEMA3F-201ENST00000002829 CBX2Q14781 532 aaPredicted RBP13.4□□□□□ -0.26
SEMA3F-201ENST00000002829 DENND5AQ6IQ26 1287 aa13.4□□□□□ -0.26
SEMA3F-201ENST00000002829 RETREG3Q86VR2 466 aa13.4□□□□□ -0.26
SEMA3F-201ENST00000002829 RNF175Q8N4F7 328 aa13.4□□□□□ -0.26
SEMA3F-201ENST00000002829 OR13J1Q8NGT2 312 aa13.4□□□□□ -0.26
SEMA3F-201ENST00000002829 SLC30A3Q99726 388 aa13.4□□□□□ -0.26
SEMA3F-201ENST00000002829 C9orf16Q9BUW7 83 aa13.4□□□□□ -0.26
SEMA3F-201ENST00000002829 MTG2Q9H4K7 406 aa13.4□□□□□ -0.26
SEMA3F-201ENST00000002829 FARSBQ9NSD9 589 aaKnown RBP13.4□□□□□ -0.26
SEMA3F-201ENST00000002829 CFAP97Q9P2B7 532 aa13.4□□□□□ -0.26
SEMA3F-201ENST00000002829 IFT80Q9P2H3 777 aaPredicted RBP13.4□□□□□ -0.26
SEMA3F-201ENST00000002829 TAF1LQ8IZX4 1826 aa13.4□□□□□ -0.27
SEMA3F-201ENST00000002829 SLC38A8A6NNN8 435 aa13.39□□□□□ -0.27
SEMA3F-201ENST00000002829 NME4O00746 187 aa13.39□□□□□ -0.27
SEMA3F-201ENST00000002829 NPHS1O60500 1241 aa13.39□□□□□ -0.27
SEMA3F-201ENST00000002829 CBFA2T3O75081 653 aa13.39□□□□□ -0.27
SEMA3F-201ENST00000002829 FADS2O95864 444 aaKnown RBP13.39□□□□□ -0.27
SEMA3F-201ENST00000002829 NNMTP40261 264 aa13.39□□□□□ -0.27
SEMA3F-201ENST00000002829 CSKP41240 450 aa13.39□□□□□ -0.27
SEMA3F-201ENST00000002829 MAGEA6P43360 314 aa13.39□□□□□ -0.27
SEMA3F-201ENST00000002829 TTPAP49638 278 aa13.39□□□□□ -0.27
SEMA3F-201ENST00000002829 IRF8Q02556 426 aa13.39□□□□□ -0.27
SEMA3F-201ENST00000002829 SREBF2Q12772 1141 aa13.39□□□□□ -0.27
SEMA3F-201ENST00000002829 KRT33BQ14525 404 aa13.39□□□□□ -0.27
SEMA3F-201ENST00000002829 RETSATQ6NUM9 610 aa13.39□□□□□ -0.27
SEMA3F-201ENST00000002829 PGM2L1Q6PCE3 622 aa13.39□□□□□ -0.27
SEMA3F-201ENST00000002829 CROCCP3Q8IVE0 287 aa13.39□□□□□ -0.27
SEMA3F-201ENST00000002829 SLC15A3Q8IY34 581 aa13.39□□□□□ -0.27
SEMA3F-201ENST00000002829 CLIP4Q8N3C7 705 aa13.39□□□□□ -0.27
SEMA3F-201ENST00000002829 NKAPQ8N5F7 415 aaKnown RBP13.39□□□□□ -0.27
SEMA3F-201ENST00000002829 UPF1Q92900 1129 aaKnown RBP eCLIP13.39□□□□□ -0.271e-6■■■■□ 19.9
SEMA3F-201ENST00000002829 ASB9Q96DX5 294 aa13.39□□□□□ -0.27
SEMA3F-201ENST00000002829 IMP4Q96G21 291 aaKnown RBP13.39□□□□□ -0.27
SEMA3F-201ENST00000002829 IL12RB2Q99665 862 aa13.39□□□□□ -0.27
SEMA3F-201ENST00000002829 FAM126AQ9BYI3 521 aaPredicted RBP13.39□□□□□ -0.27
SEMA3F-201ENST00000002829 MTMR11A4FU01 709 aa13.39□□□□□ -0.27
SEMA3F-201ENST00000002829 KPNA5O15131 536 aa13.39□□□□□ -0.27
SEMA3F-201ENST00000002829 ACRP10323 421 aa13.39□□□□□ -0.27
SEMA3F-201ENST00000002829 IDO1P14902 403 aa13.39□□□□□ -0.27
SEMA3F-201ENST00000002829 EPB42P16452 691 aa13.39□□□□□ -0.27
SEMA3F-201ENST00000002829 SCNN1AP37088 669 aa13.39□□□□□ -0.27
SEMA3F-201ENST00000002829 PAGE3Q5JUK9 113 aa13.39□□□□□ -0.27
SEMA3F-201ENST00000002829 TMEM53Q6P2H8 277 aa13.39□□□□□ -0.27
SEMA3F-201ENST00000002829 TMEM207Q6UWW9 146 aa13.39□□□□□ -0.27
SEMA3F-201ENST00000002829 TAGAPQ8N103 731 aa13.39□□□□□ -0.27
SEMA3F-201ENST00000002829 OR8H2Q8N162 312 aa13.39□□□□□ -0.27
SEMA3F-201ENST00000002829 BEND7Q8N7W2 519 aaPredicted RBP13.39□□□□□ -0.27
SEMA3F-201ENST00000002829 IRGQQ8WZA9 623 aa13.39□□□□□ -0.27
SEMA3F-201ENST00000002829 BORCS5Q969J3 196 aa13.39□□□□□ -0.27
SEMA3F-201ENST00000002829 PPP1R2P1Q96PQ5 205 aa13.39□□□□□ -0.27
SEMA3F-201ENST00000002829 TPK1Q9H3S4 243 aa13.39□□□□□ -0.27
SEMA3F-201ENST00000002829 COMMD8Q9NX08 183 aa13.39□□□□□ -0.27
SEMA3F-201ENST00000002829 RNF186Q9NXI6 227 aa13.39□□□□□ -0.27
SEMA3F-201ENST00000002829 RIMS3Q9UJD0 308 aa13.39□□□□□ -0.27
SEMA3F-201ENST00000002829 SIPA1L1O43166 1804 aa13.39□□□□□ -0.27
SEMA3F-201ENST00000002829 TBX1O43435 398 aa13.39□□□□□ -0.27
SEMA3F-201ENST00000002829 ATP5BP06576 529 aaKnown RBP13.39□□□□□ -0.27
SEMA3F-201ENST00000002829 AZGP1P25311 298 aaKnown RBP13.39□□□□□ -0.27
SEMA3F-201ENST00000002829 RFX3P48380 749 aa13.39□□□□□ -0.27
SEMA3F-201ENST00000002829 CDK9P50750 372 aaKnown RBP13.39□□□□□ -0.27
SEMA3F-201ENST00000002829 ADAM17P78536 824 aa13.39□□□□□ -0.27
SEMA3F-201ENST00000002829 RHDQ02161 417 aa13.39□□□□□ -0.27
SEMA3F-201ENST00000002829 PCBP1Q15365 356 aaKnown RBP eCLIP13.39□□□□□ -0.27
SEMA3F-201ENST00000002829 TRIP4Q15650 581 aaPredicted RBP13.39□□□□□ -0.27
SEMA3F-201ENST00000002829 PM20D1Q6GTS8 502 aa13.39□□□□□ -0.27
SEMA3F-201ENST00000002829 TRMT11Q7Z4G4 463 aaKnown RBP13.39□□□□□ -0.27
SEMA3F-201ENST00000002829 SYVN1Q86TM6 617 aa13.39□□□□□ -0.27
SEMA3F-201ENST00000002829 SERINC5Q86VE9 423 aa13.39□□□□□ -0.27
SEMA3F-201ENST00000002829 SYT12Q8IV01 421 aa13.39□□□□□ -0.27
SEMA3F-201ENST00000002829 P3H2Q8IVL5 708 aa13.39□□□□□ -0.27
SEMA3F-201ENST00000002829 LIX1Q8N485 282 aa13.39□□□□□ -0.27
SEMA3F-201ENST00000002829 OR7A2PQ8NGA2 310 aa13.39□□□□□ -0.27
SEMA3F-201ENST00000002829 OR4F6Q8NGB9 312 aa13.39□□□□□ -0.27
SEMA3F-201ENST00000002829 HEPHQ9BQS7 1158 aa13.39□□□□□ -0.27
SEMA3F-201ENST00000002829 GPBP1L1Q9HC44 474 aaPredicted RBP13.39□□□□□ -0.27
SEMA3F-201ENST00000002829 TMEM161AQ9NX61 479 aa13.39□□□□□ -0.27
SEMA3F-201ENST00000002829 PCDHGA7Q9Y5G6 932 aa13.39□□□□□ -0.27
SEMA3F-201ENST00000002829 ALDOCP09972 364 aaKnown RBP13.38□□□□□ -0.27
SEMA3F-201ENST00000002829 FMO3P31513 532 aa13.38□□□□□ -0.27
SEMA3F-201ENST00000002829 RPS9P46781 194 aaKnown RBP13.38□□□□□ -0.27
SEMA3F-201ENST00000002829 HCAR3P49019 387 aa13.38□□□□□ -0.27
SEMA3F-201ENST00000002829 PRIM2P49643 509 aa13.38□□□□□ -0.27
SEMA3F-201ENST00000002829 OR4D2P58180 307 aa13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms