RNA–Protein interactions for RNA: ENSMUST00000098548.7

Scn1b-201, Transcript of Sodium channel subunit beta-1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Scn1b, Length 1,573 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Scn1b-201ENSMUST00000098548 Dusp16Q6PCP3 660 aa22.33■■□□□ 1.17
Scn1b-201ENSMUST00000098548 Magee1Q6PCZ4 918 aaKnown RBP22.33■■□□□ 1.17
Scn1b-201ENSMUST00000098548 Hfe2Q7TQ32 420 aa22.33■■□□□ 1.17
Scn1b-201ENSMUST00000098548 Tbx10Q810F8 385 aa22.33■■□□□ 1.17
Scn1b-201ENSMUST00000098548 Fbxw8Q8BIA4 598 aa22.33■■□□□ 1.17
Scn1b-201ENSMUST00000098548 Hus1Q8BQY8 280 aa22.33■■□□□ 1.17
Scn1b-201ENSMUST00000098548 Nmur2Q8BZ39 395 aa22.33■■□□□ 1.17
Scn1b-201ENSMUST00000098548 Wdr26Q8C6G8 641 aa22.33■■□□□ 1.17
Scn1b-201ENSMUST00000098548 Ccdc186Q8C9S4 917 aa22.33■■□□□ 1.17
Scn1b-201ENSMUST00000098548 Serpinb10Q8K1K6 397 aa22.33■■□□□ 1.17
Scn1b-201ENSMUST00000098548 Fam3cQ91VU0 227 aa22.33■■□□□ 1.17
Scn1b-201ENSMUST00000098548 MpstQ99J99 297 aa22.33■■□□□ 1.17
Scn1b-201ENSMUST00000098548 Arl8bQ9CQW2 186 aa22.33■■□□□ 1.17
Scn1b-201ENSMUST00000098548 Nudt14Q9D142 222 aa22.33■■□□□ 1.17
Scn1b-201ENSMUST00000098548 Cldn22Q9D7U6 220 aa22.33■■□□□ 1.17
Scn1b-201ENSMUST00000098548 Tmbim4Q9DA39 238 aa22.33■■□□□ 1.17
Scn1b-201ENSMUST00000098548 Maged2Q9ER67 616 aa22.33■■□□□ 1.17
Scn1b-201ENSMUST00000098548 Jph3Q9ET77 744 aa22.33■■□□□ 1.17
Scn1b-201ENSMUST00000098548 CalcrlQ9R1W5 463 aa22.33■■□□□ 1.17
Scn1b-201ENSMUST00000098548 Wdr90Q6ZPG2 1874 aa22.33■■□□□ 1.16
Scn1b-201ENSMUST00000098548 Apol8A2VDH7 339 aaKnown RBP22.33■■□□□ 1.16
Scn1b-201ENSMUST00000098548 Zfp40B1B1D3 796 aa22.33■■□□□ 1.16
Scn1b-201ENSMUST00000098548 Gcm2O09102 504 aa22.33■■□□□ 1.16
Scn1b-201ENSMUST00000098548 Top3aO70157 1003 aa22.33■■□□□ 1.16
Scn1b-201ENSMUST00000098548 Il6raP22272 460 aa22.33■■□□□ 1.16
Scn1b-201ENSMUST00000098548 Ythdf1P59326 559 aaKnown RBP22.33■■□□□ 1.16
Scn1b-201ENSMUST00000098548 Atp5jP97450 108 aa22.33■■□□□ 1.16
Scn1b-201ENSMUST00000098548 Proser1Q5PRE5 913 aa22.33■■□□□ 1.16
Scn1b-201ENSMUST00000098548 Rslcan18Q7M6X5 460 aa22.33■■□□□ 1.16
Scn1b-201ENSMUST00000098548 Olfr1355Q7TQU9 310 aa22.33■■□□□ 1.16
Scn1b-201ENSMUST00000098548 Znf423Q80TS5 1292 aa22.33■■□□□ 1.16
Scn1b-201ENSMUST00000098548 FicdQ8BIX9 458 aa22.33■■□□□ 1.16
Scn1b-201ENSMUST00000098548 Col25a1Q99MQ5 666 aa22.33■■□□□ 1.16
Scn1b-201ENSMUST00000098548 Utp11Q9CZJ1 253 aaKnown RBP22.33■■□□□ 1.16
Scn1b-201ENSMUST00000098548 Slc13a1Q9JHI4 594 aa22.33■■□□□ 1.16
Scn1b-201ENSMUST00000098548 Nipa2Q9JJC8 359 aa22.33■■□□□ 1.16
Scn1b-201ENSMUST00000098548 Nufip1Q9QXX8 484 aa22.33■■□□□ 1.16
Scn1b-201ENSMUST00000098548 ProdhQ9WU79 599 aa22.33■■□□□ 1.16
Scn1b-201ENSMUST00000098548 Gbp2Q9Z0E6 589 aa22.33■■□□□ 1.16
Scn1b-201ENSMUST00000098548 Zfhx2Q2MHN3 2562 aa22.32■■□□□ 1.16
Scn1b-201ENSMUST00000098548 Rai1Q61818 1889 aa22.32■■□□□ 1.16
Scn1b-201ENSMUST00000098548 F8Q06194 2319 aa22.32■■□□□ 1.16
Scn1b-201ENSMUST00000098548 Vmn2r73D3Z7M3 851 aa22.32■■□□□ 1.16
Scn1b-201ENSMUST00000098548 Timp2P25785 220 aa22.32■■□□□ 1.16
Scn1b-201ENSMUST00000098548 GhrhrP32082 423 aa22.32■■□□□ 1.16
Scn1b-201ENSMUST00000098548 MybphP70402 483 aa22.32■■□□□ 1.16
Scn1b-201ENSMUST00000098548 Slc6a3Q61327 619 aa22.32■■□□□ 1.16
Scn1b-201ENSMUST00000098548 Cyp1b1Q64429 543 aa22.32■■□□□ 1.16
Scn1b-201ENSMUST00000098548 Foxl1Q64731 336 aa22.32■■□□□ 1.16
Scn1b-201ENSMUST00000098548 Tra2aQ6PFR5 281 aaKnown RBP22.32■■□□□ 1.16
Scn1b-201ENSMUST00000098548 Zfp606Q7TSV0 794 aa22.32■■□□□ 1.16
Scn1b-201ENSMUST00000098548 Stkld1Q80YS9 662 aa22.32■■□□□ 1.16
Scn1b-201ENSMUST00000098548 Rmdn2Q8BSE0 410 aa22.32■■□□□ 1.16
Scn1b-201ENSMUST00000098548 Mab21L3Q8CI17 429 aa22.32■■□□□ 1.16
Scn1b-201ENSMUST00000098548 CopaQ8CIE6 1224 aaKnown RBP22.32■■□□□ 1.16
Scn1b-201ENSMUST00000098548 Slco4a1Q8K078 723 aa22.32■■□□□ 1.16
Scn1b-201ENSMUST00000098548 Olfr273Q8VG87 317 aa22.32■■□□□ 1.16
Scn1b-201ENSMUST00000098548 Hacd2Q9D3B1 254 aa22.32■■□□□ 1.16
Scn1b-201ENSMUST00000098548 Tubb3Q9ERD7 450 aa22.32■■□□□ 1.16
Scn1b-201ENSMUST00000098548 Rasgrp2Q9QUG9 608 aa22.32■■□□□ 1.16
Scn1b-201ENSMUST00000098548 Oas1eA0A0J9YV76 386 aa22.31■■□□□ 1.16
Scn1b-201ENSMUST00000098548 Spin2dB1B0R2 236 aa22.31■■□□□ 1.16
Scn1b-201ENSMUST00000098548 Fam151bD3YUE4 279 aa22.31■■□□□ 1.16
Scn1b-201ENSMUST00000098548 Gm3594E9Q2A7 267 aa22.31■■□□□ 1.16
Scn1b-201ENSMUST00000098548 Gm10715J3QP74 227 aa22.31■■□□□ 1.16
Scn1b-201ENSMUST00000098548 Rgs4O08899 205 aa22.31■■□□□ 1.16
Scn1b-201ENSMUST00000098548 Serpina3kP07759 418 aa22.31■■□□□ 1.16
Scn1b-201ENSMUST00000098548 Nrg2P56974 756 aa22.31■■□□□ 1.16
Scn1b-201ENSMUST00000098548 Tbc1d10aP58802 500 aa22.31■■□□□ 1.16
Scn1b-201ENSMUST00000098548 Scn2bQ56A07 215 aa22.31■■□□□ 1.16
Scn1b-201ENSMUST00000098548 Nfatc2Q60591 927 aa22.31■■□□□ 1.16
Scn1b-201ENSMUST00000098548 Map3k10Q66L42 940 aa22.31■■□□□ 1.16
Scn1b-201ENSMUST00000098548 Dennd2cQ6P9P8 914 aa22.31■■□□□ 1.16
Scn1b-201ENSMUST00000098548 Sox11Q7M6Y2 395 aa22.31■■□□□ 1.16
Scn1b-201ENSMUST00000098548 Stk38lQ7TSE6 464 aa22.31■■□□□ 1.16
Scn1b-201ENSMUST00000098548 Chil6Q80W26 440 aa22.31■■□□□ 1.16
Scn1b-201ENSMUST00000098548 Gabra5Q8BHJ7 463 aa22.31■■□□□ 1.16
Scn1b-201ENSMUST00000098548 Pggt1bQ8BUY9 377 aa22.31■■□□□ 1.16
Scn1b-201ENSMUST00000098548 Txndc11Q8K2W3 948 aa22.31■■□□□ 1.16
Scn1b-201ENSMUST00000098548 Olfr1176Q8VG40 315 aa22.31■■□□□ 1.16
Scn1b-201ENSMUST00000098548 Olfr606Q8VGZ8 319 aa22.31■■□□□ 1.16
Scn1b-201ENSMUST00000098548 WwoxQ91WL8 414 aa22.31■■□□□ 1.16
Scn1b-201ENSMUST00000098548 ClpsQ9CQC2 113 aa22.31■■□□□ 1.16
Scn1b-201ENSMUST00000098548 Pdpk1Q9Z2A0 559 aa22.31■■□□□ 1.16
Scn1b-201ENSMUST00000098548 CenpfE9Q3P4 2997 aaKnown RBP22.31■■□□□ 1.16
Scn1b-201ENSMUST00000098548 Anapc1P53995 1944 aaKnown RBP22.31■■□□□ 1.16
Scn1b-201ENSMUST00000098548 PtgdsO09114 189 aa22.3■■□□□ 1.16
Scn1b-201ENSMUST00000098548 Ccr7P47774 378 aa22.3■■□□□ 1.16
Scn1b-201ENSMUST00000098548 Hk3Q3TRM8 922 aa22.3■■□□□ 1.16
Scn1b-201ENSMUST00000098548 Khdrbs1Q60749 443 aaKnown RBP22.3■■□□□ 1.16
Scn1b-201ENSMUST00000098548 Ckap2lQ7TS74 745 aa22.3■■□□□ 1.16
Scn1b-201ENSMUST00000098548 Pcmtd2Q8BHD8 359 aa22.3■■□□□ 1.16
Scn1b-201ENSMUST00000098548 Myoz3Q8R4E4 245 aa22.3■■□□□ 1.16
Scn1b-201ENSMUST00000098548 Cys1Q8R4T1 145 aa22.3■■□□□ 1.16
Scn1b-201ENSMUST00000098548 Mul1Q8VCM5 352 aa22.3■■□□□ 1.16
Scn1b-201ENSMUST00000098548 Olfr448Q8VES9 310 aa22.3■■□□□ 1.16
Scn1b-201ENSMUST00000098548 Olfr722Q8VFC8 308 aa22.3■■□□□ 1.16
Scn1b-201ENSMUST00000098548 Cmc1Q9CPZ8 106 aa22.3■■□□□ 1.16
Scn1b-201ENSMUST00000098548 Moxd1Q9CXI3 613 aa22.3■■□□□ 1.16
Scn1b-201ENSMUST00000098548 Pbld2Q9CXN7 288 aa22.3■■□□□ 1.16
Retrieved 100 of 22,080 RNA–protein pairs in 39.9 ms