RNA–Protein interactions for RNA: ENSMUST00000062439.4

Ccdc54-201, Transcript of Coiled-coil domain-containing protein 54, mousemouse

APPRIS P1 BASIC

Gene Ccdc54, Length 1,296 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc54-201ENSMUST00000062439 Tmem131O70472 1877 aa6.95□□□□□ -1.3
Ccdc54-201ENSMUST00000062439 Ep400Q8CHI8 3072 aaKnown RBP6.95□□□□□ -1.3
Ccdc54-201ENSMUST00000062439 Adamts9E9PUN6 1931 aa6.95□□□□□ -1.3
Ccdc54-201ENSMUST00000062439 Oip5A2AQ14 241 aa6.94□□□□□ -1.3
Ccdc54-201ENSMUST00000062439 Gm4175D3YTW8 314 aa6.94□□□□□ -1.3
Ccdc54-201ENSMUST00000062439 Wisp3D3Z5L9 354 aa6.94□□□□□ -1.3
Ccdc54-201ENSMUST00000062439 F2rl2O08675 369 aa6.94□□□□□ -1.3
Ccdc54-201ENSMUST00000062439 Eef2kO08796 724 aa6.94□□□□□ -1.3
Ccdc54-201ENSMUST00000062439 Rabep1O35551 862 aa6.94□□□□□ -1.3
Ccdc54-201ENSMUST00000062439 Tlk2O55047 718 aa6.94□□□□□ -1.3
Ccdc54-201ENSMUST00000062439 P01676 107 aa6.94□□□□□ -1.3
Ccdc54-201ENSMUST00000062439 Got2P05202 430 aaKnown RBP6.94□□□□□ -1.3
Ccdc54-201ENSMUST00000062439 Myod1P10085 318 aa6.94□□□□□ -1.3
Ccdc54-201ENSMUST00000062439 ZfaP23607 742 aa6.94□□□□□ -1.3
Ccdc54-201ENSMUST00000062439 Id2P41136 134 aa6.94□□□□□ -1.3
Ccdc54-201ENSMUST00000062439 Casp4P70343 373 aa6.94□□□□□ -1.3
Ccdc54-201ENSMUST00000062439 Epha2Q03145 977 aa6.94□□□□□ -1.3
Ccdc54-201ENSMUST00000062439 Gcnt1Q09324 428 aa6.94□□□□□ -1.3
Ccdc54-201ENSMUST00000062439 Cyp2j11Q3UNV2 504 aa6.94□□□□□ -1.3
Ccdc54-201ENSMUST00000062439 Slc5a12Q49B93 619 aa6.94□□□□□ -1.3
Ccdc54-201ENSMUST00000062439 Ttf1Q62187 859 aa6.94□□□□□ -1.3
Ccdc54-201ENSMUST00000062439 Ece2Q80Z60 881 aa6.94□□□□□ -1.3
Ccdc54-201ENSMUST00000062439 Rspo2Q8BFU0 243 aa6.94□□□□□ -1.3
Ccdc54-201ENSMUST00000062439 Ranbp6Q8BIV3 1105 aa6.94□□□□□ -1.3
Ccdc54-201ENSMUST00000062439 Lrfn3Q8BLY3 626 aa6.94□□□□□ -1.3
Ccdc54-201ENSMUST00000062439 Q8C5S3 137 aa6.94□□□□□ -1.3
Ccdc54-201ENSMUST00000062439 4922502D21RikQ8C634 189 aa6.94□□□□□ -1.3
Ccdc54-201ENSMUST00000062439 Utp15Q8C7V3 528 aaKnown RBP6.94□□□□□ -1.3
Ccdc54-201ENSMUST00000062439 Calhm6Q8C9E8 313 aa6.94□□□□□ -1.3
Ccdc54-201ENSMUST00000062439 FkrpQ8CG64 494 aa6.94□□□□□ -1.3
Ccdc54-201ENSMUST00000062439 Mill2Q8HWE5 355 aa6.94□□□□□ -1.3
Ccdc54-201ENSMUST00000062439 Acat1Q8QZT1 424 aa6.94□□□□□ -1.3
Ccdc54-201ENSMUST00000062439 Olfr291Q8VF60 317 aa6.94□□□□□ -1.3
Ccdc54-201ENSMUST00000062439 Txndc5Q91W90 417 aa6.94□□□□□ -1.3
Ccdc54-201ENSMUST00000062439 Hdhd5Q91WM2 419 aa6.94□□□□□ -1.3
Ccdc54-201ENSMUST00000062439 B4galt3Q91YY2 395 aa6.94□□□□□ -1.3
Ccdc54-201ENSMUST00000062439 MrgprdQ91ZB8 321 aa6.94□□□□□ -1.3
Ccdc54-201ENSMUST00000062439 Steap4Q923B6 470 aa6.94□□□□□ -1.3
Ccdc54-201ENSMUST00000062439 Q9D4A5 307 aa6.94□□□□□ -1.3
Ccdc54-201ENSMUST00000062439 Drap1Q9D6N5 205 aa6.94□□□□□ -1.3
Ccdc54-201ENSMUST00000062439 GatmQ9D964 423 aaKnown RBP6.94□□□□□ -1.3
Ccdc54-201ENSMUST00000062439 Actn2Q9JI91 894 aa6.94□□□□□ -1.3
Ccdc54-201ENSMUST00000062439 Ggps1Q9WTN0 300 aa6.94□□□□□ -1.3
Ccdc54-201ENSMUST00000062439 Ndufa7Q9Z1P6 113 aaKnown RBP6.94□□□□□ -1.3
Ccdc54-201ENSMUST00000062439 GsdmeQ9Z2D3 512 aa6.94□□□□□ -1.3
Ccdc54-201ENSMUST00000062439 Smchd1Q6P5D8 2007 aaKnown RBP6.94□□□□□ -1.3
Ccdc54-201ENSMUST00000062439 HttP42859 3119 aa6.94□□□□□ -1.3
Ccdc54-201ENSMUST00000062439 Fam166bA2AIP0 273 aa6.93□□□□□ -1.3
Ccdc54-201ENSMUST00000062439 Olfr1253A2AUA2 318 aa6.93□□□□□ -1.3
Ccdc54-201ENSMUST00000062439 Gm20425E9Q035 978 aaKnown RBP6.93□□□□□ -1.3
Ccdc54-201ENSMUST00000062439 Gm17093F6XGJ4 214 aa6.93□□□□□ -1.3
Ccdc54-201ENSMUST00000062439 Pabpc4lG5E8X2 370 aa6.93□□□□□ -1.3
Ccdc54-201ENSMUST00000062439 Gm4758L7N258 96 aa6.93□□□□□ -1.3
Ccdc54-201ENSMUST00000062439 Serpinb8O08800 374 aaKnown RBP6.93□□□□□ -1.3
Ccdc54-201ENSMUST00000062439 Pth1rP41593 591 aa6.93□□□□□ -1.3
Ccdc54-201ENSMUST00000062439 Nkx2-6P43688 289 aa6.93□□□□□ -1.3
Ccdc54-201ENSMUST00000062439 Nat1P50294 290 aa6.93□□□□□ -1.3
Ccdc54-201ENSMUST00000062439 EvcP57680 1005 aa6.93□□□□□ -1.3
Ccdc54-201ENSMUST00000062439 Rab3cP62823 227 aa6.93□□□□□ -1.3
Ccdc54-201ENSMUST00000062439 Vgll3P85442 326 aa6.93□□□□□ -1.3
Ccdc54-201ENSMUST00000062439 DhpsQ3TXU5 369 aa6.93□□□□□ -1.3
Ccdc54-201ENSMUST00000062439 Lsg1Q3UM18 644 aaKnown RBP6.93□□□□□ -1.3
Ccdc54-201ENSMUST00000062439 C1ql4Q4ZJM9 238 aa6.93□□□□□ -1.3
Ccdc54-201ENSMUST00000062439 Utp18Q5SSI6 552 aaKnown RBP6.93□□□□□ -1.3
Ccdc54-201ENSMUST00000062439 Cd180Q62192 661 aa6.93□□□□□ -1.3
Ccdc54-201ENSMUST00000062439 Phlda1Q62392 405 aa6.93□□□□□ -1.3
Ccdc54-201ENSMUST00000062439 Ugt1a1Q63886 535 aa6.93□□□□□ -1.3
Ccdc54-201ENSMUST00000062439 Ifit1Q64282 463 aa6.93□□□□□ -1.3
Ccdc54-201ENSMUST00000062439 Cdkn2aQ64364 169 aa6.93□□□□□ -1.3
Ccdc54-201ENSMUST00000062439 MyorgQ69ZQ1 716 aa6.93□□□□□ -1.3
Ccdc54-201ENSMUST00000062439 Nxf7Q80SZ6 620 aaKnown RBP6.93□□□□□ -1.3
Ccdc54-201ENSMUST00000062439 Nmur2Q8BZ39 395 aa6.93□□□□□ -1.3
Ccdc54-201ENSMUST00000062439 Rassf4Q8CB96 322 aa6.93□□□□□ -1.3
Ccdc54-201ENSMUST00000062439 Adam32Q8K410 754 aa6.93□□□□□ -1.3
Ccdc54-201ENSMUST00000062439 Tti1Q91V83 1085 aa6.93□□□□□ -1.3
Ccdc54-201ENSMUST00000062439 Zmynd10Q99ML0 440 aa6.93□□□□□ -1.3
Ccdc54-201ENSMUST00000062439 Rufy3Q9D394 469 aa6.93□□□□□ -1.3
Ccdc54-201ENSMUST00000062439 Snx5Q9D8U8 404 aa6.93□□□□□ -1.3
Ccdc54-201ENSMUST00000062439 Nup50Q9JIH2 466 aaKnown RBP6.93□□□□□ -1.3
Ccdc54-201ENSMUST00000062439 PollQ9QXE2 573 aaKnown RBP6.93□□□□□ -1.3
Ccdc54-201ENSMUST00000062439 Opn4Q9QXZ9 521 aa6.93□□□□□ -1.3
Ccdc54-201ENSMUST00000062439 Vnn3Q9QZ25 500 aa6.93□□□□□ -1.3
Ccdc54-201ENSMUST00000062439 Ubxn8Q9QZ49 277 aa6.93□□□□□ -1.3
Ccdc54-201ENSMUST00000062439 Elf4Q9Z2U4 655 aa6.93□□□□□ -1.3
Ccdc54-201ENSMUST00000062439 LctF8VPT3 1931 aa6.93□□□□□ -1.3
Ccdc54-201ENSMUST00000062439 Myh9Q8VDD5 1960 aaKnown RBP6.92□□□□□ -1.3
Ccdc54-201ENSMUST00000062439 Trav13-4-dv7A0A075B6C2 110 aa6.92□□□□□ -1.3
Ccdc54-201ENSMUST00000062439 D3Ertd254eA0A0G2JEM5 796 aa6.92□□□□□ -1.3
Ccdc54-201ENSMUST00000062439 Trav13d-4A0A0G2JFX3 110 aa6.92□□□□□ -1.3
Ccdc54-201ENSMUST00000062439 Olfr424E9Q0Q2 315 aa6.92□□□□□ -1.3
Ccdc54-201ENSMUST00000062439 Gm21883J3QPV3 123 aa6.92□□□□□ -1.3
Ccdc54-201ENSMUST00000062439 Ascl5M0QWB7 188 aa6.92□□□□□ -1.3
Ccdc54-201ENSMUST00000062439 Ldb2O55203 373 aa6.92□□□□□ -1.3
Ccdc54-201ENSMUST00000062439 Stra6O70491 670 aa6.92□□□□□ -1.3
Ccdc54-201ENSMUST00000062439 AldocP05063 363 aa6.92□□□□□ -1.3
Ccdc54-201ENSMUST00000062439 Gna11P21278 359 aa6.92□□□□□ -1.3
Ccdc54-201ENSMUST00000062439 Wfdc3Q14AE4 130 aa6.92□□□□□ -1.3
Ccdc54-201ENSMUST00000062439 Ctdnep1Q3TP92 244 aa6.92□□□□□ -1.3
Ccdc54-201ENSMUST00000062439 Xxylt1Q3U4G3 392 aa6.92□□□□□ -1.3
Ccdc54-201ENSMUST00000062439 Fam189a2Q4FZH1 290 aa6.92□□□□□ -1.3
Retrieved 100 of 22,080 RNA–protein pairs in 31.6 ms