RNA–Protein interactions for RNA: ENSMUST00000052648.8

Ccdc28a-201, Transcript of Coiled-coil domain-containing 28A, mousemouse

TSL 1 (best) BASIC

Gene Ccdc28a, Length 2,255 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc28a-201ENSMUST00000052648 Krt77Q6IFZ6 572 aa8.71□□□□□ -1.01
Ccdc28a-201ENSMUST00000052648 Svs1Q6WIZ7 820 aa8.71□□□□□ -1.01
Ccdc28a-201ENSMUST00000052648 Sgo2Q7TSY8 1164 aa8.71□□□□□ -1.01
Ccdc28a-201ENSMUST00000052648 DdnQ80TS7 710 aa8.71□□□□□ -1.01
Ccdc28a-201ENSMUST00000052648 Ubp1Q811S7 540 aa8.71□□□□□ -1.01
Ccdc28a-201ENSMUST00000052648 Ap5m1Q8BJ63 490 aa8.71□□□□□ -1.01
Ccdc28a-201ENSMUST00000052648 Elmo1Q8BPU7 727 aa8.71□□□□□ -1.01
Ccdc28a-201ENSMUST00000052648 Svs2Q8BS30 375 aa8.71□□□□□ -1.01
Ccdc28a-201ENSMUST00000052648 Pcdhb7Q8CDY9 829 aa8.71□□□□□ -1.01
Ccdc28a-201ENSMUST00000052648 Nfatc4Q8K120 901 aa8.71□□□□□ -1.01
Ccdc28a-201ENSMUST00000052648 Chrna3Q8R4G9 499 aa8.71□□□□□ -1.01
Ccdc28a-201ENSMUST00000052648 EdaraddQ8VHX2 208 aa8.71□□□□□ -1.01
Ccdc28a-201ENSMUST00000052648 Glra3Q91XP5 464 aa8.71□□□□□ -1.01
Ccdc28a-201ENSMUST00000052648 Kctd4Q9D7X1 259 aa8.71□□□□□ -1.01
Ccdc28a-201ENSMUST00000052648 1700086D15RikQ9D9E9 151 aa8.71□□□□□ -1.01
Ccdc28a-201ENSMUST00000052648 Top3bQ9Z321 862 aaKnown RBP8.71□□□□□ -1.01
Ccdc28a-201ENSMUST00000052648 Ccdc194A0A140LIT1 234 aa8.71□□□□□ -1.02
Ccdc28a-201ENSMUST00000052648 Ssc4dA1L0T3 586 aa8.71□□□□□ -1.02
Ccdc28a-201ENSMUST00000052648 Dmrta2A2A9A2 531 aa8.71□□□□□ -1.02
Ccdc28a-201ENSMUST00000052648 Smok3aC0HKC8 504 aa8.71□□□□□ -1.02
Ccdc28a-201ENSMUST00000052648 Smok3bC0HKC9 504 aa8.71□□□□□ -1.02
Ccdc28a-201ENSMUST00000052648 Vmn2r73D3Z7M3 851 aa8.71□□□□□ -1.02
Ccdc28a-201ENSMUST00000052648 Gm2237E9Q501 211 aa8.71□□□□□ -1.02
Ccdc28a-201ENSMUST00000052648 Vmn2r22E9Q7S8 853 aa8.71□□□□□ -1.02
Ccdc28a-201ENSMUST00000052648 Zfp788E9Q980 884 aa8.71□□□□□ -1.02
Ccdc28a-201ENSMUST00000052648 Galnt9G3X942 604 aa8.71□□□□□ -1.02
Ccdc28a-201ENSMUST00000052648 Gm3591K7N6X2 186 aa8.71□□□□□ -1.02
Ccdc28a-201ENSMUST00000052648 Vmn1r169L7N275 304 aa8.71□□□□□ -1.02
Ccdc28a-201ENSMUST00000052648 Pknox1O70477 436 aa8.71□□□□□ -1.02
Ccdc28a-201ENSMUST00000052648 Stam2O88811 523 aa8.71□□□□□ -1.02
Ccdc28a-201ENSMUST00000052648 Best1O88870 551 aa8.71□□□□□ -1.02
Ccdc28a-201ENSMUST00000052648 Cyp1a1P00184 524 aa8.71□□□□□ -1.02
Ccdc28a-201ENSMUST00000052648 P01654 111 aa8.71□□□□□ -1.02
Ccdc28a-201ENSMUST00000052648 P01656 111 aa8.71□□□□□ -1.02
Ccdc28a-201ENSMUST00000052648 P03977 111 aa8.71□□□□□ -1.02
Ccdc28a-201ENSMUST00000052648 Pdha2P35487 391 aa8.71□□□□□ -1.02
Ccdc28a-201ENSMUST00000052648 Fdft1P53798 416 aa8.71□□□□□ -1.02
Ccdc28a-201ENSMUST00000052648 Pip5k1bP70181 539 aa8.71□□□□□ -1.02
Ccdc28a-201ENSMUST00000052648 Rasgrf2P70392 1189 aa8.71□□□□□ -1.02
Ccdc28a-201ENSMUST00000052648 Cpne9Q1RLL3 553 aa8.71□□□□□ -1.02
Ccdc28a-201ENSMUST00000052648 Marveld2Q3UZP0 555 aa8.71□□□□□ -1.02
Ccdc28a-201ENSMUST00000052648 CpQ61147 1061 aa8.71□□□□□ -1.02
Ccdc28a-201ENSMUST00000052648 Grid1Q61627 1009 aa8.71□□□□□ -1.02
Ccdc28a-201ENSMUST00000052648 Spa17Q62252 149 aa8.71□□□□□ -1.02
Ccdc28a-201ENSMUST00000052648 Ostf1Q62422 215 aa8.71□□□□□ -1.02
Ccdc28a-201ENSMUST00000052648 Plk4Q64702 925 aa8.71□□□□□ -1.02
Ccdc28a-201ENSMUST00000052648 Sohlh1Q6IUP1 357 aa8.71□□□□□ -1.02
Ccdc28a-201ENSMUST00000052648 Olfr1344Q7TQV3 321 aa8.71□□□□□ -1.02
Ccdc28a-201ENSMUST00000052648 Lrrtm4Q80XG9 590 aa8.71□□□□□ -1.02
Ccdc28a-201ENSMUST00000052648 TtpaQ8BWP5 278 aa8.71□□□□□ -1.02
Ccdc28a-201ENSMUST00000052648 Cep68Q8C0D9 733 aa8.71□□□□□ -1.02
Ccdc28a-201ENSMUST00000052648 Gpat3Q8C0N2 438 aa8.71□□□□□ -1.02
Ccdc28a-201ENSMUST00000052648 Fbxo48Q8CAT8 161 aa8.71□□□□□ -1.02
Ccdc28a-201ENSMUST00000052648 Clcc1Q99LI2 539 aa8.71□□□□□ -1.02
Ccdc28a-201ENSMUST00000052648 Zmynd10Q99ML0 440 aa8.71□□□□□ -1.02
Ccdc28a-201ENSMUST00000052648 Snx2Q9CWK8 519 aa8.71□□□□□ -1.02
Ccdc28a-201ENSMUST00000052648 Tm9sf1Q9DBU0 606 aa8.71□□□□□ -1.02
Ccdc28a-201ENSMUST00000052648 FancgQ9EQR6 623 aa8.71□□□□□ -1.02
Ccdc28a-201ENSMUST00000052648 Acsl4Q9QUJ7 711 aa8.71□□□□□ -1.02
Ccdc28a-201ENSMUST00000052648 Mpp2Q9WV34 552 aa8.71□□□□□ -1.02
Ccdc28a-201ENSMUST00000052648 Apobec2Q9WV35 224 aa8.71□□□□□ -1.02
Ccdc28a-201ENSMUST00000052648 Gipc2Q9Z2H7 314 aa8.71□□□□□ -1.02
Ccdc28a-201ENSMUST00000052648 CroccQ8CJ40 2009 aa8.71□□□□□ -1.02
Ccdc28a-201ENSMUST00000052648 Dock4P59764 1978 aa8.71□□□□□ -1.02
Ccdc28a-201ENSMUST00000052648 Brca2P97929 3329 aa8.71□□□□□ -1.02
Ccdc28a-201ENSMUST00000052648 Vmn2r74E9PW21 853 aa8.7□□□□□ -1.02
Ccdc28a-201ENSMUST00000052648 Zfp277E9Q6D6 583 aaKnown RBP8.7□□□□□ -1.02
Ccdc28a-201ENSMUST00000052648 Rgs4O08899 205 aa8.7□□□□□ -1.02
Ccdc28a-201ENSMUST00000052648 Srsf5O35326 269 aaKnown RBP8.7□□□□□ -1.02
Ccdc28a-201ENSMUST00000052648 Gpr27O54897 379 aa8.7□□□□□ -1.02
Ccdc28a-201ENSMUST00000052648 Mthfd2P18155 350 aaKnown RBP8.7□□□□□ -1.02
Ccdc28a-201ENSMUST00000052648 UoxP25688 303 aa8.7□□□□□ -1.02
Ccdc28a-201ENSMUST00000052648 Kif5aP33175 1027 aa8.7□□□□□ -1.02
Ccdc28a-201ENSMUST00000052648 Rack1P68040 317 aaKnown RBP8.7□□□□□ -1.02
Ccdc28a-201ENSMUST00000052648 Uhmk1P97343 419 aa8.7□□□□□ -1.02
Ccdc28a-201ENSMUST00000052648 Adra1bP97717 514 aa8.7□□□□□ -1.02
Ccdc28a-201ENSMUST00000052648 Defb23Q30KP0 166 aa8.7□□□□□ -1.02
Ccdc28a-201ENSMUST00000052648 Pnrc1Q3TWH3 297 aa8.7□□□□□ -1.02
Ccdc28a-201ENSMUST00000052648 Nt5c3bQ3UFY7 300 aa8.7□□□□□ -1.02
Ccdc28a-201ENSMUST00000052648 Fam81aQ3UXZ6 364 aa8.7□□□□□ -1.02
Ccdc28a-201ENSMUST00000052648 Cage1Q5IR70 849 aa8.7□□□□□ -1.02
Ccdc28a-201ENSMUST00000052648 Gngt1Q61012 74 aa8.7□□□□□ -1.02
Ccdc28a-201ENSMUST00000052648 PigaQ64323 485 aa8.7□□□□□ -1.02
Ccdc28a-201ENSMUST00000052648 Gabra5Q8BHJ7 463 aa8.7□□□□□ -1.02
Ccdc28a-201ENSMUST00000052648 Slitrk6Q8C110 840 aa8.7□□□□□ -1.02
Ccdc28a-201ENSMUST00000052648 Rab7bQ8VEA8 199 aa8.7□□□□□ -1.02
Ccdc28a-201ENSMUST00000052648 Olfr868Q8VFI8 309 aa8.7□□□□□ -1.02
Ccdc28a-201ENSMUST00000052648 Olfr1Q8VGI1 314 aa8.7□□□□□ -1.02
Ccdc28a-201ENSMUST00000052648 Mrpl37Q921S7 423 aaKnown RBP8.7□□□□□ -1.02
Ccdc28a-201ENSMUST00000052648 MtapQ9CQ65 283 aa8.7□□□□□ -1.02
Ccdc28a-201ENSMUST00000052648 3300002I08RikQ9CXH3 147 aa8.7□□□□□ -1.02
Ccdc28a-201ENSMUST00000052648 Mcemp1Q9D8U6 183 aa8.7□□□□□ -1.02
Ccdc28a-201ENSMUST00000052648 Marveld3Q9D956 376 aa8.7□□□□□ -1.02
Ccdc28a-201ENSMUST00000052648 Ift43Q9DA69 206 aa8.7□□□□□ -1.02
Ccdc28a-201ENSMUST00000052648 Amdhd1Q9DBA8 426 aa8.7□□□□□ -1.02
Ccdc28a-201ENSMUST00000052648 Jam2Q9JI59 298 aa8.7□□□□□ -1.02
Ccdc28a-201ENSMUST00000052648 Slc5a3Q9JKZ2 718 aa8.7□□□□□ -1.02
Ccdc28a-201ENSMUST00000052648 Ruvbl2Q9WTM5 463 aaKnown RBP8.7□□□□□ -1.02
Ccdc28a-201ENSMUST00000052648 SufuQ9Z0P7 484 aa8.7□□□□□ -1.02
Ccdc28a-201ENSMUST00000052648 Shcbp1Q9Z179 668 aa8.7□□□□□ -1.02
Retrieved 100 of 22,080 RNA–protein pairs in 18.5 ms