RNA–Protein interactions for RNA: ENSMUST00000042717.12

Trim39-201, Transcript of E3 ubiquitin-protein ligase TRIM39, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim39, Length 3,085 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim39-201ENSMUST00000042717 Gm6356L7N2A7 188 aa8.57□□□□□ -1.04
Trim39-201ENSMUST00000042717 St3gal5O88829 414 aa8.57□□□□□ -1.04
Trim39-201ENSMUST00000042717 IghgP01863 330 aa8.57□□□□□ -1.04
Trim39-201ENSMUST00000042717 Hoxa4P06798 285 aa8.57□□□□□ -1.04
Trim39-201ENSMUST00000042717 Slc11a1P41251 548 aa8.57□□□□□ -1.04
Trim39-201ENSMUST00000042717 Matn1P51942 500 aaKnown RBP8.57□□□□□ -1.04
Trim39-201ENSMUST00000042717 HdxQ14B70 692 aa8.57□□□□□ -1.04
Trim39-201ENSMUST00000042717 AbrQ5SSL4 859 aa8.57□□□□□ -1.04
Trim39-201ENSMUST00000042717 Adam2Q60718 735 aa8.57□□□□□ -1.04
Trim39-201ENSMUST00000042717 Rbbp7Q60973 425 aaKnown RBP8.57□□□□□ -1.04
Trim39-201ENSMUST00000042717 ManealQ6P1J0 452 aa8.57□□□□□ -1.04
Trim39-201ENSMUST00000042717 Orai3Q6P8G8 290 aa8.57□□□□□ -1.04
Trim39-201ENSMUST00000042717 Trim17Q7TPM3 477 aa8.57□□□□□ -1.04
Trim39-201ENSMUST00000042717 Olfr845Q7TRG2 312 aa8.57□□□□□ -1.04
Trim39-201ENSMUST00000042717 Olfr293Q7TS10 336 aa8.57□□□□□ -1.04
Trim39-201ENSMUST00000042717 Parp12Q8BZ20 711 aaKnown RBP8.57□□□□□ -1.04
Trim39-201ENSMUST00000042717 Parp9Q8CAS9 866 aa8.57□□□□□ -1.04
Trim39-201ENSMUST00000042717 Clip4Q8CI96 704 aa8.57□□□□□ -1.04
Trim39-201ENSMUST00000042717 Gm42417Q8K1D0 126 aa8.57□□□□□ -1.04
Trim39-201ENSMUST00000042717 ZwilchQ8R060 589 aa8.57□□□□□ -1.04
Trim39-201ENSMUST00000042717 Ssx2ipQ8VC66 615 aa8.57□□□□□ -1.04
Trim39-201ENSMUST00000042717 Elp2Q91WG4 831 aaKnown RBP8.57□□□□□ -1.04
Trim39-201ENSMUST00000042717 StambpQ9CQ26 424 aa8.57□□□□□ -1.04
Trim39-201ENSMUST00000042717 Clca1Q9D7Z6 913 aa8.57□□□□□ -1.04
Trim39-201ENSMUST00000042717 Tex9Q9D845 387 aa8.57□□□□□ -1.04
Trim39-201ENSMUST00000042717 Rsc1a1Q9ER99 582 aa8.57□□□□□ -1.04
Trim39-201ENSMUST00000042717 Epb41l4bQ9JMC8 527 aa8.57□□□□□ -1.04
Trim39-201ENSMUST00000042717 Pin1Q9QUR7 165 aa8.57□□□□□ -1.04
Trim39-201ENSMUST00000042717 PodxlQ9R0M4 503 aa8.57□□□□□ -1.04
Trim39-201ENSMUST00000042717 Hao1Q9WU19 370 aa8.57□□□□□ -1.04
Trim39-201ENSMUST00000042717 Gria3Q9Z2W9 888 aa8.57□□□□□ -1.04
Trim39-201ENSMUST00000042717 Lrrc37aB1AWG4 3215 aa8.57□□□□□ -1.04
Trim39-201ENSMUST00000042717 Wdfy3Q6VNB8 3508 aa8.57□□□□□ -1.04
Trim39-201ENSMUST00000042717 D3Ertd254eA0A0G2JEM5 796 aa8.57□□□□□ -1.04
Trim39-201ENSMUST00000042717 Gm28729A0A1B0GSW2 409 aa8.57□□□□□ -1.04
Trim39-201ENSMUST00000042717 4930469K13RikA0A286YDB2 92 aa8.57□□□□□ -1.04
Trim39-201ENSMUST00000042717 Tmem236A2ARJ3 344 aa8.57□□□□□ -1.04
Trim39-201ENSMUST00000042717 Zmynd12A2BGJ5 363 aa8.57□□□□□ -1.04
Trim39-201ENSMUST00000042717 Apol11bE9PUZ0 337 aa8.57□□□□□ -1.04
Trim39-201ENSMUST00000042717 Enthd1E9Q1Z2 618 aa8.57□□□□□ -1.04
Trim39-201ENSMUST00000042717 Ccdc188F6WEU2 249 aa8.57□□□□□ -1.04
Trim39-201ENSMUST00000042717 Rgsl1H3BL40 1073 aa8.57□□□□□ -1.04
Trim39-201ENSMUST00000042717 HalP35492 657 aa8.57□□□□□ -1.04
Trim39-201ENSMUST00000042717 Atp6v0d1P51863 351 aa8.57□□□□□ -1.04
Trim39-201ENSMUST00000042717 Slc10a2P70172 348 aa8.57□□□□□ -1.04
Trim39-201ENSMUST00000042717 Cd80Q00609 306 aa8.57□□□□□ -1.04
Trim39-201ENSMUST00000042717 Mmp11Q02853 492 aa8.57□□□□□ -1.04
Trim39-201ENSMUST00000042717 Cdkl4Q3TZA2 342 aa8.57□□□□□ -1.04
Trim39-201ENSMUST00000042717 Znrf3Q5SSZ7 913 aa8.57□□□□□ -1.04
Trim39-201ENSMUST00000042717 PianpQ6P1B3 278 aa8.57□□□□□ -1.04
Trim39-201ENSMUST00000042717 Sarm1Q6PDS3 724 aa8.57□□□□□ -1.04
Trim39-201ENSMUST00000042717 Cpped1Q8BFS6 312 aa8.57□□□□□ -1.04
Trim39-201ENSMUST00000042717 Hus1Q8BQY8 280 aa8.57□□□□□ -1.04
Trim39-201ENSMUST00000042717 Gpr158Q8C419 1200 aa8.57□□□□□ -1.04
Trim39-201ENSMUST00000042717 Fam110bQ8C739 366 aa8.57□□□□□ -1.04
Trim39-201ENSMUST00000042717 Wdr60Q8C761 999 aa8.57□□□□□ -1.04
Trim39-201ENSMUST00000042717 Sphk1Q8CI15 382 aa8.57□□□□□ -1.04
Trim39-201ENSMUST00000042717 Slco4a1Q8K078 723 aa8.57□□□□□ -1.04
Trim39-201ENSMUST00000042717 Vmn1r185Q8R299 319 aa8.57□□□□□ -1.04
Trim39-201ENSMUST00000042717 Zfp940Q8R2Q3 566 aa8.57□□□□□ -1.04
Trim39-201ENSMUST00000042717 Plbd1Q8VCI0 550 aa8.57□□□□□ -1.04
Trim39-201ENSMUST00000042717 Coro6Q920M5 471 aa8.57□□□□□ -1.04
Trim39-201ENSMUST00000042717 Rnf31Q924T7 1066 aa8.57□□□□□ -1.04
Trim39-201ENSMUST00000042717 MpstQ99J99 297 aa8.57□□□□□ -1.04
Trim39-201ENSMUST00000042717 Cryl1Q99KP3 319 aa8.57□□□□□ -1.04
Trim39-201ENSMUST00000042717 LipfQ9CPP7 395 aa8.57□□□□□ -1.04
Trim39-201ENSMUST00000042717 Pgm1Q9D0F9 562 aa8.57□□□□□ -1.04
Trim39-201ENSMUST00000042717 Hyal6Q9D4E9 494 aa8.57□□□□□ -1.04
Trim39-201ENSMUST00000042717 Dusp26Q9D700 211 aa8.57□□□□□ -1.04
Trim39-201ENSMUST00000042717 Ccdc70Q9D9B0 223 aa8.57□□□□□ -1.04
Trim39-201ENSMUST00000042717 Zswim2Q9D9X6 631 aa8.57□□□□□ -1.04
Trim39-201ENSMUST00000042717 Klc4Q9DBS5 619 aa8.57□□□□□ -1.04
Trim39-201ENSMUST00000042717 Capn15Q9JLG8 1095 aa8.57□□□□□ -1.04
Trim39-201ENSMUST00000042717 Cdh17Q9R100 827 aa8.57□□□□□ -1.04
Trim39-201ENSMUST00000042717 Col4a4Q9QZR9 1682 aa8.57□□□□□ -1.04
Trim39-201ENSMUST00000042717 Eif2b3B1AUN2 452 aaKnown RBP8.56□□□□□ -1.04
Trim39-201ENSMUST00000042717 Fam71f2B2RXB0 297 aa8.56□□□□□ -1.04
Trim39-201ENSMUST00000042717 Gprin2D3Z1D7 455 aa8.56□□□□□ -1.04
Trim39-201ENSMUST00000042717 Vmn2r96E9PZU5 664 aa8.56□□□□□ -1.04
Trim39-201ENSMUST00000042717 Zfp871G5E905 615 aa8.56□□□□□ -1.04
Trim39-201ENSMUST00000042717 Mid1O70583 680 aa8.56□□□□□ -1.04
Trim39-201ENSMUST00000042717 Tpst2O88856 376 aa8.56□□□□□ -1.04
Trim39-201ENSMUST00000042717 QrfprP83861 433 aa8.56□□□□□ -1.04
Trim39-201ENSMUST00000042717 Rbm15Q0VBL3 962 aaKnown RBP8.56□□□□□ -1.04
Trim39-201ENSMUST00000042717 Zdhhc20Q5Y5T1 380 aa8.56□□□□□ -1.04
Trim39-201ENSMUST00000042717 Rexo4Q6PAQ4 432 aaKnown RBP8.56□□□□□ -1.04
Trim39-201ENSMUST00000042717 Ubtd2Q6PGH0 234 aa8.56□□□□□ -1.04
Trim39-201ENSMUST00000042717 Trappc6aQ78XR0 159 aa8.56□□□□□ -1.04
Trim39-201ENSMUST00000042717 Sel1l3Q80TS8 1137 aa8.56□□□□□ -1.04
Trim39-201ENSMUST00000042717 Mettl20Q80ZM3 255 aa8.56□□□□□ -1.04
Trim39-201ENSMUST00000042717 Gxylt2Q810K9 444 aa8.56□□□□□ -1.04
Trim39-201ENSMUST00000042717 Rap2cQ8BU31 183 aa8.56□□□□□ -1.04
Trim39-201ENSMUST00000042717 Bend5Q8C6D4 421 aa8.56□□□□□ -1.04
Trim39-201ENSMUST00000042717 Znf628Q8CJ78 1038 aa8.56□□□□□ -1.04
Trim39-201ENSMUST00000042717 LctlQ8K1F9 566 aa8.56□□□□□ -1.04
Trim39-201ENSMUST00000042717 Ints10Q8K2A7 710 aaKnown RBP8.56□□□□□ -1.04
Trim39-201ENSMUST00000042717 Lars2Q8VDC0 902 aa8.56□□□□□ -1.04
Trim39-201ENSMUST00000042717 Prdm9Q96EQ9 843 aa8.56□□□□□ -1.04
Trim39-201ENSMUST00000042717 Unc50Q9CQ61 259 aa8.56□□□□□ -1.04
Trim39-201ENSMUST00000042717 Gsdmdc1Q9D8T2 487 aa8.56□□□□□ -1.04
Retrieved 100 of 22,080 RNA–protein pairs in 36.8 ms