RNA–Protein interactions for RNA: ENST00000641371.1

PHGDH-215, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 725 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-215ENST00000641371 PREBQ9HCU5 417 aa9.57□□□□□ -0.88
PHGDH-215ENST00000641371 TMEM45AQ9NWC5 275 aa9.57□□□□□ -0.88
PHGDH-215ENST00000641371 NDE1Q9NXR1 346 aa9.57□□□□□ -0.88
PHGDH-215ENST00000641371 CACNA2D2Q9NY47 1150 aa9.57□□□□□ -0.88
PHGDH-215ENST00000641371 TAGLN3Q9UI15 199 aa9.57□□□□□ -0.88
PHGDH-215ENST00000641371 ZDHHC2Q9UIJ5 367 aa9.57□□□□□ -0.88
PHGDH-215ENST00000641371 FZD4Q9ULV1 537 aa9.57□□□□□ -0.88
PHGDH-215ENST00000641371 TRAF6Q9Y4K3 522 aa9.57□□□□□ -0.88
PHGDH-215ENST00000641371 CAPN7Q9Y6W3 813 aa9.57□□□□□ -0.88
PHGDH-215ENST00000641371 LAMA2P24043 3122 aaKnown RBP9.57□□□□□ -0.88
PHGDH-215ENST00000641371 NEMP2A6NFY4 417 aa9.56□□□□□ -0.88
PHGDH-215ENST00000641371 CAPN14A8MX76 684 aa9.56□□□□□ -0.88
PHGDH-215ENST00000641371 CDC7O00311 574 aa9.56□□□□□ -0.88
PHGDH-215ENST00000641371 MAN2B1O00754 1011 aa9.56□□□□□ -0.88
PHGDH-215ENST00000641371 AZIN1O14977 448 aa9.56□□□□□ -0.88
PHGDH-215ENST00000641371 KCNJ13O60928 360 aa9.56□□□□□ -0.88
PHGDH-215ENST00000641371 SLCO2B1O94956 709 aa9.56□□□□□ -0.88
PHGDH-215ENST00000641371 ESRRBO95718 433 aa9.56□□□□□ -0.88
PHGDH-215ENST00000641371 CATP04040 527 aaKnown RBP9.56□□□□□ -0.88
PHGDH-215ENST00000641371 ENO1P06733 434 aaKnown RBP9.56□□□□□ -0.88
PHGDH-215ENST00000641371 UROSP10746 265 aa9.56□□□□□ -0.88
PHGDH-215ENST00000641371 KCNA5P22460 613 aa9.56□□□□□ -0.88
PHGDH-215ENST00000641371 IGFBP4P22692 258 aa9.56□□□□□ -0.88
PHGDH-215ENST00000641371 ARRB2P32121 409 aa9.56□□□□□ -0.88
PHGDH-215ENST00000641371 ATP4BP51164 291 aa9.56□□□□□ -0.88
PHGDH-215ENST00000641371 RPS21P63220 83 aaKnown RBP9.56□□□□□ -0.88
PHGDH-215ENST00000641371 B4GALNT1Q00973 533 aa9.56□□□□□ -0.88
PHGDH-215ENST00000641371 ZNF33BQ06732 778 aa9.56□□□□□ -0.88
PHGDH-215ENST00000641371 SF3A3Q12874 501 aaKnown RBP eCLIP9.56□□□□□ -0.881e-9■■■■□ 22.2
PHGDH-215ENST00000641371 TMEM115Q12893 351 aaPredicted RBP9.56□□□□□ -0.88
PHGDH-215ENST00000641371 RPA4Q13156 261 aa9.56□□□□□ -0.88
PHGDH-215ENST00000641371 TUBB3Q13509 450 aa9.56□□□□□ -0.88
PHGDH-215ENST00000641371 GRIN2CQ14957 1233 aa9.56□□□□□ -0.88
PHGDH-215ENST00000641371 HERC3Q15034 1050 aa9.56□□□□□ -0.88
PHGDH-215ENST00000641371 PPP1R3AQ16821 1122 aa9.56□□□□□ -0.88
PHGDH-215ENST00000641371 SYTL3Q4VX76 610 aa9.56□□□□□ -0.88
PHGDH-215ENST00000641371 ACSBG2Q5FVE4 666 aa9.56□□□□□ -0.88
PHGDH-215ENST00000641371 PIP5KL1Q5T9C9 394 aa9.56□□□□□ -0.88
PHGDH-215ENST00000641371 RAET1GQ6H3X3 334 aa9.56□□□□□ -0.88
PHGDH-215ENST00000641371 USP30Q70CQ3 517 aa9.56□□□□□ -0.88
PHGDH-215ENST00000641371 ASRGL1Q7L266 308 aa9.56□□□□□ -0.88
PHGDH-215ENST00000641371 LRRC70Q7Z2Q7 622 aa9.56□□□□□ -0.88
PHGDH-215ENST00000641371 PARP9Q8IXQ6 854 aa9.56□□□□□ -0.88
PHGDH-215ENST00000641371 CPSF7Q8N684 471 aaKnown RBP9.56□□□□□ -0.88
PHGDH-215ENST00000641371 CLDN19Q8N6F1 224 aa9.56□□□□□ -0.88
PHGDH-215ENST00000641371 ZNF366Q8N895 744 aa9.56□□□□□ -0.88
PHGDH-215ENST00000641371 FBXO15Q8NCQ5 510 aaPredicted RBP9.56□□□□□ -0.88
PHGDH-215ENST00000641371 PHC3Q8NDX5 983 aa9.56□□□□□ -0.88
PHGDH-215ENST00000641371 MAGEC3Q8TD91 643 aa9.56□□□□□ -0.88
PHGDH-215ENST00000641371 MCOLN3Q8TDD5 553 aa9.56□□□□□ -0.88
PHGDH-215ENST00000641371 MYLIPQ8WY64 445 aa9.56□□□□□ -0.88
PHGDH-215ENST00000641371 ELMO1Q92556 727 aa9.56□□□□□ -0.88
PHGDH-215ENST00000641371 EXT2Q93063 718 aa9.56□□□□□ -0.88
PHGDH-215ENST00000641371 SCAMP4Q969E2 229 aa9.56□□□□□ -0.88
PHGDH-215ENST00000641371 CHFRQ96EP1 664 aa9.56□□□□□ -0.88
PHGDH-215ENST00000641371 SLC30A3Q99726 388 aa9.56□□□□□ -0.88
PHGDH-215ENST00000641371 EGFL8Q99944 293 aa9.56□□□□□ -0.88
PHGDH-215ENST00000641371 CCDC106Q9BWC9 280 aa9.56□□□□□ -0.88
PHGDH-215ENST00000641371 ZNF395Q9H8N7 513 aaPredicted RBP9.56□□□□□ -0.88
PHGDH-215ENST00000641371 RMI1Q9H9A7 625 aa9.56□□□□□ -0.88
PHGDH-215ENST00000641371 ARHGEF3Q9NR81 526 aa9.56□□□□□ -0.88
PHGDH-215ENST00000641371 RIC8BQ9NVN3 520 aa9.56□□□□□ -0.88
PHGDH-215ENST00000641371 WWOXQ9NZC7 414 aa9.56□□□□□ -0.88
PHGDH-215ENST00000641371 CDH22Q9UJ99 828 aa9.56□□□□□ -0.88
PHGDH-215ENST00000641371 PTBP2Q9UKA9 531 aaKnown RBP9.56□□□□□ -0.88
PHGDH-215ENST00000641371 NCKAP1Q9Y2A7 1128 aa9.56□□□□□ -0.88
PHGDH-215ENST00000641371 PRSS21Q9Y6M0 314 aa9.56□□□□□ -0.88
PHGDH-215ENST00000641371 LRRK1Q38SD2 2015 aa9.56□□□□□ -0.88
PHGDH-215ENST00000641371 COL4A2P08572 1712 aa9.56□□□□□ -0.88
PHGDH-215ENST00000641371 A0A0U1RQS6 177 aa9.55□□□□□ -0.88
PHGDH-215ENST00000641371 IQCF5A8MTL0 148 aa9.55□□□□□ -0.88
PHGDH-215ENST00000641371 FADS2P1A8MWK0 482 aa9.55□□□□□ -0.88
PHGDH-215ENST00000641371 K7EPI3 171 aa9.55□□□□□ -0.88
PHGDH-215ENST00000641371 K7EQS6 105 aa9.55□□□□□ -0.88
PHGDH-215ENST00000641371 GPR39O43194 453 aa9.55□□□□□ -0.88
PHGDH-215ENST00000641371 SPINT1O43278 529 aa9.55□□□□□ -0.88
PHGDH-215ENST00000641371 GRID2O43424 1007 aa9.55□□□□□ -0.88
PHGDH-215ENST00000641371 MBTPS2O43462 519 aa9.55□□□□□ -0.88
PHGDH-215ENST00000641371 GPC4O75487 556 aa9.55□□□□□ -0.88
PHGDH-215ENST00000641371 CDK14O94921 469 aa9.55□□□□□ -0.88
PHGDH-215ENST00000641371 WDR47O94967 919 aa9.55□□□□□ -0.88
PHGDH-215ENST00000641371 THRAP10827 490 aa9.55□□□□□ -0.88
PHGDH-215ENST00000641371 HOXB2P14652 356 aa9.55□□□□□ -0.88
PHGDH-215ENST00000641371 NQO1P15559 274 aaKnown RBP9.55□□□□□ -0.88
PHGDH-215ENST00000641371 MAP4P27816 1152 aaKnown RBP9.55□□□□□ -0.88
PHGDH-215ENST00000641371 CCR7P32248 378 aa9.55□□□□□ -0.88
PHGDH-215ENST00000641371 GGT5P36269 586 aa9.55□□□□□ -0.88
PHGDH-215ENST00000641371 KCNC1P48547 511 aa9.55□□□□□ -0.88
PHGDH-215ENST00000641371 PGGT1BP53609 377 aa9.55□□□□□ -0.88
PHGDH-215ENST00000641371 MESP2Q0VG99 397 aa9.55□□□□□ -0.88
PHGDH-215ENST00000641371 CNTN1Q12860 1018 aa9.55□□□□□ -0.88
PHGDH-215ENST00000641371 GRIK2Q13002 908 aa9.55□□□□□ -0.88
PHGDH-215ENST00000641371 SQLEQ14534 574 aa9.55□□□□□ -0.88
PHGDH-215ENST00000641371 AAK1Q2M2I8 961 aa9.55□□□□□ -0.88
PHGDH-215ENST00000641371 SMU1Q2TAY7 513 aa9.55□□□□□ -0.88
PHGDH-215ENST00000641371 LRRC73Q5JTD7 316 aa9.55□□□□□ -0.88
PHGDH-215ENST00000641371 AGBL4Q5VU57 503 aa9.55□□□□□ -0.88
PHGDH-215ENST00000641371 KANK2Q63ZY3 851 aa9.55□□□□□ -0.88
PHGDH-215ENST00000641371 CYHR1Q6ZMK1 362 aa9.55□□□□□ -0.88
PHGDH-215ENST00000641371 GPRIN3Q6ZVF9 776 aa9.55□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms