RNA–Protein interactions for RNA: ENST00000640653.1

VEGFA-232, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VEGFA, Length 1,170 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-232ENST00000640653 LINC00615Q96LM1 132 aaPredicted RBP24.69■■□□□ 1.54
VEGFA-232ENST00000640653 COPS8Q99627 209 aa24.69■■□□□ 1.54
VEGFA-232ENST00000640653 CTRCQ99895 268 aa24.69■■□□□ 1.54
VEGFA-232ENST00000640653 EPHA6Q9UF33 1036 aa24.69■■□□□ 1.54
VEGFA-232ENST00000640653 POLR1CO15160 346 aaPredicted RBP24.68■■□□□ 1.54
VEGFA-232ENST00000640653 RAD1O60671 282 aa24.68■■□□□ 1.54
VEGFA-232ENST00000640653 RASSF9O75901 435 aa24.68■■□□□ 1.54
VEGFA-232ENST00000640653 MC4RP32245 332 aa24.68■■□□□ 1.54
VEGFA-232ENST00000640653 SEPT6Q14141 434 aa24.68■■□□□ 1.54
VEGFA-232ENST00000640653 KLHL35Q6PF15 583 aa24.68■■□□□ 1.54
VEGFA-232ENST00000640653 GPR150Q8NGU9 434 aa24.68■■□□□ 1.54
VEGFA-232ENST00000640653 ATG4AQ8WYN0 398 aa24.68■■□□□ 1.54
VEGFA-232ENST00000640653 RAB33BQ9H082 229 aa24.68■■□□□ 1.54
VEGFA-232ENST00000640653 ZNF768Q9H5H4 540 aaKnown RBP24.68■■□□□ 1.54
VEGFA-232ENST00000640653 FAM96AQ9H5X1 160 aa24.68■■□□□ 1.54
VEGFA-232ENST00000640653 IMP3Q9NV31 184 aaKnown RBP24.68■■□□□ 1.54
VEGFA-232ENST00000640653 MGAQ8IWI9 3026 aa24.68■■□□□ 1.54
VEGFA-232ENST00000640653 H7C0S8 307 aa24.67■■□□□ 1.54
VEGFA-232ENST00000640653 MTHFD1P11586 935 aaKnown RBP24.67■■□□□ 1.54
VEGFA-232ENST00000640653 TPH1P17752 444 aa24.67■■□□□ 1.54
VEGFA-232ENST00000640653 LEPRP48357 1165 aaKnown RBP24.67■■□□□ 1.54
VEGFA-232ENST00000640653 POU6F1Q14863 301 aa24.67■■□□□ 1.54
VEGFA-232ENST00000640653 PLCL1Q15111 1095 aa24.67■■□□□ 1.54
VEGFA-232ENST00000640653 IRGCQ6NXR0 463 aa24.67■■□□□ 1.54
VEGFA-232ENST00000640653 PRSS42Q7Z5A4 293 aa24.67■■□□□ 1.54
VEGFA-232ENST00000640653 LINC00523Q86TU6 105 aa24.67■■□□□ 1.54
VEGFA-232ENST00000640653 ALS2CR12Q96Q35 445 aa24.67■■□□□ 1.54
VEGFA-232ENST00000640653 WWP1Q9H0M0 922 aa24.67■■□□□ 1.54
VEGFA-232ENST00000640653 APMAPQ9HDC9 416 aa24.67■■□□□ 1.54
VEGFA-232ENST00000640653 NLE1Q9NVX2 485 aaPredicted RBP24.67■■□□□ 1.54
VEGFA-232ENST00000640653 SIDT1Q9NXL6 827 aaKnown RBP24.67■■□□□ 1.54
VEGFA-232ENST00000640653 PILRAQ9UKJ1 303 aa24.67■■□□□ 1.54
VEGFA-232ENST00000640653 SDK2Q58EX2 2172 aa24.66■■□□□ 1.54
VEGFA-232ENST00000640653 CCL22O00626 93 aa24.66■■□□□ 1.54
VEGFA-232ENST00000640653 LIASO43766 372 aa24.66■■□□□ 1.54
VEGFA-232ENST00000640653 ITGB2P05107 769 aa24.66■■□□□ 1.54
VEGFA-232ENST00000640653 SLC35G4P0C7Q5 338 aa24.66■■□□□ 1.54
VEGFA-232ENST00000640653 ATP1B2P14415 290 aaPredicted RBP24.66■■□□□ 1.54
VEGFA-232ENST00000640653 MAP4P27816 1152 aaKnown RBP24.66■■□□□ 1.54
VEGFA-232ENST00000640653 PRLHRP49683 370 aa24.66■■□□□ 1.54
VEGFA-232ENST00000640653 SEPHS1P49903 392 aa24.66■■□□□ 1.54
VEGFA-232ENST00000640653 LY6DQ14210 128 aa24.66■■□□□ 1.54
VEGFA-232ENST00000640653 ZRANB3Q5FWF4 1079 aa24.66■■□□□ 1.54
VEGFA-232ENST00000640653 CACHD1Q5VU97 1274 aa24.66■■□□□ 1.54
VEGFA-232ENST00000640653 SLC13A5Q86YT5 568 aaPredicted RBP24.66■■□□□ 1.54
VEGFA-232ENST00000640653 NLGN4XQ8N0W4 816 aa24.66■■□□□ 1.54
VEGFA-232ENST00000640653 ZNF843Q8N446 348 aa24.66■■□□□ 1.54
VEGFA-232ENST00000640653 TAB3Q8N5C8 712 aaPredicted RBP24.66■■□□□ 1.54
VEGFA-232ENST00000640653 NLGN4YQ8NFZ3 816 aaPredicted RBP24.66■■□□□ 1.54
VEGFA-232ENST00000640653 HM13Q8TCT9 377 aa24.66■■□□□ 1.54
VEGFA-232ENST00000640653 STYXQ8WUJ0 223 aa24.66■■□□□ 1.54
VEGFA-232ENST00000640653 C12orf66Q96MD2 445 aa24.66■■□□□ 1.54
VEGFA-232ENST00000640653 ZDHHC3Q9NYG2 299 aa24.66■■□□□ 1.54
VEGFA-232ENST00000640653 FAM8A1Q9UBU6 413 aa24.66■■□□□ 1.54
VEGFA-232ENST00000640653 AHCTF1Q8WYP5 2266 aa24.65■■□□□ 1.54
VEGFA-232ENST00000640653 ERI2A8K979 691 aaKnown RBP24.65■■□□□ 1.54
VEGFA-232ENST00000640653 SGTAO43765 313 aa24.65■■□□□ 1.54
VEGFA-232ENST00000640653 FOXM1Q08050 763 aa24.65■■□□□ 1.54
VEGFA-232ENST00000640653 RPS6KA1Q15418 735 aa24.65■■□□□ 1.54
VEGFA-232ENST00000640653 OASLQ15646 514 aaKnown RBP24.65■■□□□ 1.54
VEGFA-232ENST00000640653 FAM92BQ6ZTR7 304 aa24.65■■□□□ 1.54
VEGFA-232ENST00000640653 CFAP206Q8IYR0 622 aa24.65■■□□□ 1.54
VEGFA-232ENST00000640653 NAT14Q8WUY8 206 aa24.65■■□□□ 1.54
VEGFA-232ENST00000640653 ZFPM2Q8WW38 1151 aa24.65■■□□□ 1.54
VEGFA-232ENST00000640653 INSM2Q96T92 566 aaPredicted RBP24.65■■□□□ 1.54
VEGFA-232ENST00000640653 CCM2Q9BSQ5 444 aa24.65■■□□□ 1.54
VEGFA-232ENST00000640653 SPRY4Q9C004 299 aa24.65■■□□□ 1.54
VEGFA-232ENST00000640653 TRIT1Q9H3H1 467 aaKnown RBP24.65■■□□□ 1.54
VEGFA-232ENST00000640653 VPS37BQ9H9H4 285 aa24.65■■□□□ 1.54
VEGFA-232ENST00000640653 ZNF148Q9UQR1 794 aa24.65■■□□□ 1.54
VEGFA-232ENST00000640653 TMEM184BQ9Y519 407 aaPredicted RBP24.65■■□□□ 1.54
VEGFA-232ENST00000640653 CFAP20Q9Y6A4 193 aaKnown RBP24.65■■□□□ 1.54
VEGFA-232ENST00000640653 TRBV5-4A0A0C4DH59 114 aa24.64■■□□□ 1.54
VEGFA-232ENST00000640653 STK17BO94768 372 aa24.64■■□□□ 1.54
VEGFA-232ENST00000640653 GAS8O95995 478 aa24.64■■□□□ 1.54
VEGFA-232ENST00000640653 IFNB1P01574 187 aa24.64■■□□□ 1.54
VEGFA-232ENST00000640653 WT1P19544 449 aaPredicted RBP24.64■■□□□ 1.54
VEGFA-232ENST00000640653 ACRV1P26436 265 aa24.64■■□□□ 1.54
VEGFA-232ENST00000640653 FDFT1P37268 417 aa24.64■■□□□ 1.54
VEGFA-232ENST00000640653 MEI1Q5TIA1 1274 aa24.64■■□□□ 1.54
VEGFA-232ENST00000640653 CYB5D1Q6P9G0 228 aa24.64■■□□□ 1.54
VEGFA-232ENST00000640653 XKR5Q6UX68 686 aa24.64■■□□□ 1.54
VEGFA-232ENST00000640653 TAS2R42Q7RTR8 314 aa24.64■■□□□ 1.54
VEGFA-232ENST00000640653 DNAAF3Q8N9W5 541 aa24.64■■□□□ 1.54
VEGFA-232ENST00000640653 KLHL6Q8WZ60 621 aa24.64■■□□□ 1.54
VEGFA-232ENST00000640653 MED8Q96G25 268 aa24.64■■□□□ 1.54
VEGFA-232ENST00000640653 CDKN2AIPNLQ96HQ2 116 aa24.64■■□□□ 1.54
VEGFA-232ENST00000640653 PIH1D1Q9NWS0 290 aaKnown RBP24.64■■□□□ 1.54
VEGFA-232ENST00000640653 COLEC10Q9Y6Z7 277 aa24.64■■□□□ 1.54
VEGFA-232ENST00000640653 IGLV3-16A0A075B6K0 115 aa24.63■■□□□ 1.53
VEGFA-232ENST00000640653 C17orf113A0A1B0GUU1 675 aa24.63■■□□□ 1.53
VEGFA-232ENST00000640653 KIF1CO43896 1103 aaKnown RBP24.63■■□□□ 1.53
VEGFA-232ENST00000640653 CCDC175P0C221 793 aa24.63■■□□□ 1.53
VEGFA-232ENST00000640653 LIFP15018 202 aa24.63■■□□□ 1.53
VEGFA-232ENST00000640653 LMAN1P49257 510 aa24.63■■□□□ 1.53
VEGFA-232ENST00000640653 CACNG1Q06432 222 aa24.63■■□□□ 1.53
VEGFA-232ENST00000640653 CDH17Q12864 832 aa24.63■■□□□ 1.53
VEGFA-232ENST00000640653 IL11RAQ14626 422 aa24.63■■□□□ 1.53
VEGFA-232ENST00000640653 GSE1Q14687 1217 aa24.63■■□□□ 1.53
VEGFA-232ENST00000640653 SKIDA1Q1XH10 827 aa24.63■■□□□ 1.53
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms