RNA–Protein interactions for RNA: ENST00000638536.1

SCN1B-206, Transcript of sodium voltage-gated channel beta subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCN1B, Length 1,600 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1B-206ENST00000638536 TMEM9Q9P0T7 183 aa21.35■■□□□ 1.01
SCN1B-206ENST00000638536 CFAP47Q6ZTR5 3102 aa21.35■■□□□ 1.01
SCN1B-206ENST00000638536 SDR42E2A6NKP2 422 aa21.34■■□□□ 1.01
SCN1B-206ENST00000638536 TP73O15350 636 aa21.34■■□□□ 1.01
SCN1B-206ENST00000638536 CD3EAPO15446 510 aaKnown RBP21.34■■□□□ 1.01
SCN1B-206ENST00000638536 CSF2RBP32927 897 aa21.34■■□□□ 1.01
SCN1B-206ENST00000638536 NSG1P42857 185 aa21.34■■□□□ 1.01
SCN1B-206ENST00000638536 ARCN1P48444 511 aaKnown RBP21.34■■□□□ 1.01
SCN1B-206ENST00000638536 ITIH4Q14624 930 aa21.34■■□□□ 1.01
SCN1B-206ENST00000638536 MSS51Q4VC12 460 aa21.34■■□□□ 1.01
SCN1B-206ENST00000638536 PACS1Q6VY07 963 aa21.34■■□□□ 1.01
SCN1B-206ENST00000638536 GPR150Q8NGU9 434 aa21.34■■□□□ 1.01
SCN1B-206ENST00000638536 WDR48Q8TAF3 677 aa21.34■■□□□ 1.01
SCN1B-206ENST00000638536 INSM2Q96T92 566 aaPredicted RBP21.34■■□□□ 1.01
SCN1B-206ENST00000638536 TRIM31Q9BZY9 425 aa21.34■■□□□ 1.01
SCN1B-206ENST00000638536 WWP1Q9H0M0 922 aa21.34■■□□□ 1.01
SCN1B-206ENST00000638536 DSPP15924 2871 aaKnown RBP21.34■■□□□ 1.01
SCN1B-206ENST00000638536 MPOP05164 745 aa21.33■■□□□ 1.01
SCN1B-206ENST00000638536 F7P08709 466 aaPredicted RBP21.33■■□□□ 1.01
SCN1B-206ENST00000638536 SLC2A4P14672 509 aa21.33■■□□□ 1.01
SCN1B-206ENST00000638536 MPSTP25325 297 aa21.33■■□□□ 1.01
SCN1B-206ENST00000638536 PDHA2P29803 388 aa21.33■■□□□ 1.01
SCN1B-206ENST00000638536 RPE65Q16518 533 aa21.33■■□□□ 1.01
SCN1B-206ENST00000638536 DUS1LQ6P1R4 473 aaKnown RBP21.33■■□□□ 1.01
SCN1B-206ENST00000638536 SLITRK4Q8IW52 837 aa21.33■■□□□ 1.01
SCN1B-206ENST00000638536 CCM2Q9BSQ5 444 aa21.33■■□□□ 1.01
SCN1B-206ENST00000638536 TAF4O00268 1085 aa21.33■■□□□ 1
SCN1B-206ENST00000638536 CPNE6O95741 557 aa21.33■■□□□ 1
SCN1B-206ENST00000638536 VIPP01282 170 aa21.33■■□□□ 1
SCN1B-206ENST00000638536 PROS1P07225 676 aa21.33■■□□□ 1
SCN1B-206ENST00000638536 ZFP36L1Q07352 338 aaKnown RBP21.33■■□□□ 1
SCN1B-206ENST00000638536 ANKRD20A4Q4UJ75 823 aa21.33■■□□□ 1
SCN1B-206ENST00000638536 LKAAEAR1Q8TD35 194 aa21.33■■□□□ 1
SCN1B-206ENST00000638536 JPH3Q8WXH2 748 aaPredicted RBP21.33■■□□□ 1
SCN1B-206ENST00000638536 SLC40A1Q9NP59 571 aa21.33■■□□□ 1
SCN1B-206ENST00000638536 ZCWPW2A0A1B0GU75 182 aa21.32■■□□□ 1
SCN1B-206ENST00000638536 FAM237BA0A1B0GVD1 139 aa21.32■■□□□ 1
SCN1B-206ENST00000638536 IQCF5A8MTL0 148 aa21.32■■□□□ 1
SCN1B-206ENST00000638536 PREPP48147 710 aa21.32■■□□□ 1
SCN1B-206ENST00000638536 RTP5Q14D33 572 aa21.32■■□□□ 1
SCN1B-206ENST00000638536 MAP9Q49MG5 647 aa21.32■■□□□ 1
SCN1B-206ENST00000638536 TMEM26Q6ZUK4 368 aa21.32■■□□□ 1
SCN1B-206ENST00000638536 SYDE1Q6ZW31 735 aaPredicted RBP21.32■■□□□ 1
SCN1B-206ENST00000638536 TMEM135Q86UB9 458 aa21.32■■□□□ 1
SCN1B-206ENST00000638536 IGDCC3Q8IVU1 814 aa21.32■■□□□ 1
SCN1B-206ENST00000638536 HM13Q8TCT9 377 aa21.32■■□□□ 1
SCN1B-206ENST00000638536 TBRG4Q969Z0 631 aaKnown RBP eCLIP21.32■■□□□ 1
SCN1B-206ENST00000638536 ZNF669Q96BR6 464 aaPredicted RBP21.32■■□□□ 1
SCN1B-206ENST00000638536 RMDN2Q96LZ7 410 aa21.32■■□□□ 1
SCN1B-206ENST00000638536 RUNDC3BQ96NL0 473 aa21.32■■□□□ 1
SCN1B-206ENST00000638536 NRSN2Q9GZP1 204 aa21.32■■□□□ 1
SCN1B-206ENST00000638536 COG4Q9H9E3 785 aa21.32■■□□□ 1
SCN1B-206ENST00000638536 OGFRQ9NZT2 677 aa21.32■■□□□ 1
SCN1B-206ENST00000638536 SATB2Q9UPW6 733 aa21.32■■□□□ 1
SCN1B-206ENST00000638536 MAD1L1Q9Y6D9 718 aa21.32■■□□□ 1
SCN1B-206ENST00000638536 C17orf113A0A1B0GUU1 675 aa21.31■■□□□ 1
SCN1B-206ENST00000638536 ITGB6P18564 788 aa21.31■■□□□ 1
SCN1B-206ENST00000638536 INHBCP55103 352 aa21.31■■□□□ 1
SCN1B-206ENST00000638536 DHX9Q08211 1270 aaKnown RBP21.31■■□□□ 1
SCN1B-206ENST00000638536 DHX34Q14147 1143 aaKnown RBP21.31■■□□□ 1
SCN1B-206ENST00000638536 GPR18Q14330 331 aa21.31■■□□□ 1
SCN1B-206ENST00000638536 C3orf38Q5JPI3 329 aa21.31■■□□□ 1
SCN1B-206ENST00000638536 KIAA0930Q6ICG6 404 aaPredicted RBP21.31■■□□□ 1
SCN1B-206ENST00000638536 HIBCHQ6NVY1 386 aaPredicted RBP21.31■■□□□ 1
SCN1B-206ENST00000638536 CERS6Q6ZMG9 384 aa21.31■■□□□ 1
SCN1B-206ENST00000638536 PIM3Q86V86 326 aa21.31■■□□□ 1
SCN1B-206ENST00000638536 TRIM48Q8IWZ4 208 aa21.31■■□□□ 1
SCN1B-206ENST00000638536 UNC5BQ8IZJ1 945 aa21.31■■□□□ 1
SCN1B-206ENST00000638536 RCBTB1Q8NDN9 531 aa21.31■■□□□ 1
SCN1B-206ENST00000638536 PRR11Q96HE9 360 aaPredicted RBP21.31■■□□□ 1
SCN1B-206ENST00000638536 EPB41L5Q9HCM4 733 aa21.31■■□□□ 1
SCN1B-206ENST00000638536 IMP3Q9NV31 184 aaKnown RBP21.31■■□□□ 1
SCN1B-206ENST00000638536 SAMD15Q9P1V8 674 aa21.31■■□□□ 1
SCN1B-206ENST00000638536 ANAPC5Q9UJX4 755 aa21.31■■□□□ 1
SCN1B-206ENST00000638536 RPS6KL1Q9Y6S9 549 aa21.31■■□□□ 1
SCN1B-206ENST00000638536 AHCTF1Q8WYP5 2266 aa21.31■■□□□ 1
SCN1B-206ENST00000638536 RAD51CO43502 376 aa21.3■■□□□ 1
SCN1B-206ENST00000638536 AP2A2O94973 939 aa21.3■■□□□ 1
SCN1B-206ENST00000638536 HALP42357 657 aa21.3■■□□□ 1
SCN1B-206ENST00000638536 MAPK9P45984 424 aa21.3■■□□□ 1
SCN1B-206ENST00000638536 RPL21P46778 160 aaKnown RBP21.3■■□□□ 1
SCN1B-206ENST00000638536 ITGA8P53708 1063 aa21.3■■□□□ 1
SCN1B-206ENST00000638536 BRD3Q15059 726 aa21.3■■□□□ 1
SCN1B-206ENST00000638536 LYPLAL1Q5VWZ2 237 aa21.3■■□□□ 1
SCN1B-206ENST00000638536 CAPRIN2Q6IMN6 1127 aaKnown RBP21.3■■□□□ 1
SCN1B-206ENST00000638536 HOOK3Q86VS8 718 aa21.3■■□□□ 1
SCN1B-206ENST00000638536 KDF1Q8NAX2 398 aaPredicted RBP21.3■■□□□ 1
SCN1B-206ENST00000638536 CXorf40BQ96DE9 158 aa21.3■■□□□ 1
SCN1B-206ENST00000638536 C12orf66Q96MD2 445 aa21.3■■□□□ 1
SCN1B-206ENST00000638536 OR52A5Q9H2C5 316 aa21.3■■□□□ 1
SCN1B-206ENST00000638536 STN1Q9H668 368 aaKnown RBP21.3■■□□□ 1
SCN1B-206ENST00000638536 POT1Q9NUX5 634 aa21.3■■□□□ 1
SCN1B-206ENST00000638536 ACSL5Q9ULC5 683 aa21.3■■□□□ 1
SCN1B-206ENST00000638536 SNX24Q9Y343 169 aa21.3■■□□□ 1
SCN1B-206ENST00000638536 AK5Q9Y6K8 562 aa21.3■■□□□ 1
SCN1B-206ENST00000638536 IGHV5-10-1A0A0J9YXX1 117 aa21.29■■□□□ 1
SCN1B-206ENST00000638536 BRINP1O60477 761 aa21.29■■□□□ 1
SCN1B-206ENST00000638536 SEC31AO94979 1220 aaKnown RBP21.29■■□□□ 1
SCN1B-206ENST00000638536 HGFP14210 728 aa21.29■■□□□ 1
SCN1B-206ENST00000638536 TYRP1P17643 537 aa21.29■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms