RNA–Protein interactions for RNA: ENST00000637952.1

CACNA1A-254, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

Gene CACNA1A, Length 3,894 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-254ENST00000637952 LONP2Q86WA8 852 aa8.47□□□□□ -1.05
CACNA1A-254ENST00000637952 GPSM1Q86YR5 675 aa8.47□□□□□ -1.05
CACNA1A-254ENST00000637952 CILP2Q8IUL8 1156 aa8.47□□□□□ -1.05
CACNA1A-254ENST00000637952 CPNE9Q8IYJ1 553 aa8.47□□□□□ -1.05
CACNA1A-254ENST00000637952 C2orf73Q8N5S3 287 aaPredicted RBP8.47□□□□□ -1.05
CACNA1A-254ENST00000637952 ZBTB2Q8N680 514 aa8.47□□□□□ -1.05
CACNA1A-254ENST00000637952 ESX1Q8N693 406 aa8.47□□□□□ -1.05
CACNA1A-254ENST00000637952 C12orf66Q96MD2 445 aa8.47□□□□□ -1.05
CACNA1A-254ENST00000637952 RANBP9Q96S59 729 aa8.47□□□□□ -1.05
CACNA1A-254ENST00000637952 PFDN4Q9NQP4 134 aa8.47□□□□□ -1.05
CACNA1A-254ENST00000637952 MARCH4Q9P2E8 410 aaPredicted RBP8.47□□□□□ -1.05
CACNA1A-254ENST00000637952 SPASTQ9UBP0 616 aa8.47□□□□□ -1.05
CACNA1A-254ENST00000637952 RABGEF1Q9UJ41 708 aa8.47□□□□□ -1.05
CACNA1A-254ENST00000637952 SMG5Q9UPR3 1016 aaKnown RBP8.47□□□□□ -1.05
CACNA1A-254ENST00000637952 R4GN57 208 aa8.47□□□□□ -1.05
CACNA1A-254ENST00000637952 CXorf49A8MYA2 514 aaPredicted RBP8.47□□□□□ -1.05
CACNA1A-254ENST00000637952 LATO43561 262 aa8.47□□□□□ -1.05
CACNA1A-254ENST00000637952 CHEK2O96017 543 aa8.47□□□□□ -1.05
CACNA1A-254ENST00000637952 C2P06681 752 aa8.47□□□□□ -1.05
CACNA1A-254ENST00000637952 C1SP09871 688 aa8.47□□□□□ -1.05
CACNA1A-254ENST00000637952 TFEBP19484 476 aa8.47□□□□□ -1.05
CACNA1A-254ENST00000637952 TAS2R39P59534 338 aa8.47□□□□□ -1.05
CACNA1A-254ENST00000637952 SRSF5Q13243 272 aaKnown RBP8.47□□□□□ -1.05
CACNA1A-254ENST00000637952 TMED1Q13445 227 aa8.47□□□□□ -1.05
CACNA1A-254ENST00000637952 RBBP5Q15291 538 aaKnown RBP8.47□□□□□ -1.05
CACNA1A-254ENST00000637952 SNAP47Q5SQN1 464 aa8.47□□□□□ -1.05
CACNA1A-254ENST00000637952 SIDT2Q8NBJ9 832 aaKnown RBP8.47□□□□□ -1.05
CACNA1A-254ENST00000637952 KCTD4Q8WVF5 259 aa8.47□□□□□ -1.05
CACNA1A-254ENST00000637952 SLC44A1Q8WWI5 657 aa8.47□□□□□ -1.05
CACNA1A-254ENST00000637952 INPP5DQ92835 1189 aa8.47□□□□□ -1.05
CACNA1A-254ENST00000637952 PEX13Q92968 403 aa8.47□□□□□ -1.05
CACNA1A-254ENST00000637952 SLC38A3Q99624 504 aa8.47□□□□□ -1.05
CACNA1A-254ENST00000637952 HGH1Q9BTY7 390 aa8.47□□□□□ -1.05
CACNA1A-254ENST00000637952 MRM3Q9HC36 420 aaKnown RBP8.47□□□□□ -1.05
CACNA1A-254ENST00000637952 SNX15Q9NRS6 342 aa8.47□□□□□ -1.05
CACNA1A-254ENST00000637952 A0A1W2PQF6 199 aa8.46□□□□□ -1.05
CACNA1A-254ENST00000637952 ISM1B1AKI9 464 aa8.46□□□□□ -1.05
CACNA1A-254ENST00000637952 GPC4O75487 556 aa8.46□□□□□ -1.05
CACNA1A-254ENST00000637952 LTA4HP09960 611 aaKnown RBP8.46□□□□□ -1.05
CACNA1A-254ENST00000637952 ALDH4A1P30038 563 aa8.46□□□□□ -1.05
CACNA1A-254ENST00000637952 HNRNPKP61978 463 aaKnown RBP eCLIP8.46□□□□□ -1.05
CACNA1A-254ENST00000637952 ZNF844Q08AG5 666 aa8.46□□□□□ -1.05
CACNA1A-254ENST00000637952 SUZ12Q15022 739 aaKnown RBP8.46□□□□□ -1.05
CACNA1A-254ENST00000637952 ATG16L1Q676U5 607 aa8.46□□□□□ -1.05
CACNA1A-254ENST00000637952 DENND5AQ6IQ26 1287 aa8.46□□□□□ -1.05
CACNA1A-254ENST00000637952 LRRC8EQ6NSJ5 796 aa8.46□□□□□ -1.05
CACNA1A-254ENST00000637952 C16orf46Q6P387 395 aa8.46□□□□□ -1.05
CACNA1A-254ENST00000637952 TBC1D19Q8N5T2 526 aa8.46□□□□□ -1.05
CACNA1A-254ENST00000637952 FRMD1Q8N878 549 aa8.46□□□□□ -1.05
CACNA1A-254ENST00000637952 OR56A4Q8NGH8 313 aa8.46□□□□□ -1.05
CACNA1A-254ENST00000637952 CDC26Q8NHZ8 85 aa8.46□□□□□ -1.05
CACNA1A-254ENST00000637952 STAG3L4Q8TBR4 150 aa8.46□□□□□ -1.05
CACNA1A-254ENST00000637952 SLC6A18Q96N87 628 aa8.46□□□□□ -1.05
CACNA1A-254ENST00000637952 OR2M4Q96R27 311 aa8.46□□□□□ -1.05
CACNA1A-254ENST00000637952 CCM2Q9BSQ5 444 aa8.46□□□□□ -1.05
CACNA1A-254ENST00000637952 ACAT2Q9BWD1 397 aa8.46□□□□□ -1.05
CACNA1A-254ENST00000637952 VIPAS39Q9H9C1 493 aa8.46□□□□□ -1.05
CACNA1A-254ENST00000637952 KLHL3Q9UH77 587 aa8.46□□□□□ -1.05
CACNA1A-254ENST00000637952 CACNA1IQ9P0X4 2223 aa8.46□□□□□ -1.06
CACNA1A-254ENST00000637952 GSAPA4D1B5 854 aa8.46□□□□□ -1.06
CACNA1A-254ENST00000637952 KHNYNO15037 678 aaKnown RBP8.46□□□□□ -1.06
CACNA1A-254ENST00000637952 SH3BP5O60239 455 aa8.46□□□□□ -1.06
CACNA1A-254ENST00000637952 CCNT2O60583 730 aaKnown RBP8.46□□□□□ -1.06
CACNA1A-254ENST00000637952 RASSF9O75901 435 aa8.46□□□□□ -1.06
CACNA1A-254ENST00000637952 TPBGLP0DKB5 382 aa8.46□□□□□ -1.06
CACNA1A-254ENST00000637952 NUDT1P36639 197 aa8.46□□□□□ -1.06
CACNA1A-254ENST00000637952 GPX6P59796 221 aa8.46□□□□□ -1.06
CACNA1A-254ENST00000637952 PPP2CBP62714 309 aa8.46□□□□□ -1.06
CACNA1A-254ENST00000637952 PPP2CAP67775 309 aa8.46□□□□□ -1.06
CACNA1A-254ENST00000637952 ZNF460Q14592 562 aa8.46□□□□□ -1.06
CACNA1A-254ENST00000637952 ANGPT1Q15389 498 aa8.46□□□□□ -1.06
CACNA1A-254ENST00000637952 CCDC6Q16204 474 aa8.46□□□□□ -1.06
CACNA1A-254ENST00000637952 TRIM61Q5EBN2 209 aa8.46□□□□□ -1.06
CACNA1A-254ENST00000637952 PIP5KL1Q5T9C9 394 aa8.46□□□□□ -1.06
CACNA1A-254ENST00000637952 N4BP2L1Q5TBK1 243 aaPredicted RBP8.46□□□□□ -1.06
CACNA1A-254ENST00000637952 AGBL4Q5VU57 503 aa8.46□□□□□ -1.06
CACNA1A-254ENST00000637952 FBXW10Q5XX13 1052 aa8.46□□□□□ -1.06
CACNA1A-254ENST00000637952 LAYNQ6UX15 382 aa8.46□□□□□ -1.06
CACNA1A-254ENST00000637952 UBE2R2Q712K3 238 aaPredicted RBP8.46□□□□□ -1.06
CACNA1A-254ENST00000637952 ZSWIM9Q86XI8 627 aa8.46□□□□□ -1.06
CACNA1A-254ENST00000637952 CBARPQ8N350 705 aaPredicted RBP8.46□□□□□ -1.06
CACNA1A-254ENST00000637952 RBBP8Q99708 897 aa8.46□□□□□ -1.06
CACNA1A-254ENST00000637952 WSB2Q9NYS7 404 aaPredicted RBP8.46□□□□□ -1.06
CACNA1A-254ENST00000637952 COLEC10Q9Y6Z7 277 aa8.46□□□□□ -1.06
CACNA1A-254ENST00000637952 LAMA3Q16787 3333 aa8.46□□□□□ -1.06
CACNA1A-254ENST00000637952 CXorf51AA0A1B0GTR3 108 aa8.46□□□□□ -1.06
CACNA1A-254ENST00000637952 TMEM120BA0PK00 339 aa8.46□□□□□ -1.06
CACNA1A-254ENST00000637952 H0Y8X5 98 aa8.46□□□□□ -1.06
CACNA1A-254ENST00000637952 H3BQF6 201 aa8.46□□□□□ -1.06
CACNA1A-254ENST00000637952 TRAFD1O14545 582 aaPredicted RBP8.46□□□□□ -1.06
CACNA1A-254ENST00000637952 LINGO3P0C6S8 592 aa8.46□□□□□ -1.06
CACNA1A-254ENST00000637952 SLC2A4P14672 509 aa8.46□□□□□ -1.06
CACNA1A-254ENST00000637952 CD27P26842 260 aa8.46□□□□□ -1.06
CACNA1A-254ENST00000637952 LIMK2P53671 638 aa8.46□□□□□ -1.06
CACNA1A-254ENST00000637952 PPP2R2AP63151 447 aa8.46□□□□□ -1.06
CACNA1A-254ENST00000637952 ELOCQ15369 112 aa8.46□□□□□ -1.06
CACNA1A-254ENST00000637952 GAB4Q2WGN9 574 aa8.46□□□□□ -1.06
CACNA1A-254ENST00000637952 TMEM52BQ4KMG9 183 aa8.46□□□□□ -1.06
CACNA1A-254ENST00000637952 SGO1Q5FBB7 561 aa8.46□□□□□ -1.06
CACNA1A-254ENST00000637952 KIAA0907Q7Z7F0 614 aaPredicted RBP8.46□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms