RNA–Protein interactions for RNA: ENST00000637450.1

CLN6-220, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 3

Gene CLN6, Length 868 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-220ENST00000637450 C11orf63Q6NUN7 778 aa18.06■□□□□ 0.48
CLN6-220ENST00000637450 TC2NQ8N9U0 490 aa18.06■□□□□ 0.48
CLN6-220ENST00000637450 KRT35Q92764 455 aa18.06■□□□□ 0.48
CLN6-220ENST00000637450 FCRL4Q96PJ5 515 aa18.06■□□□□ 0.48
CLN6-220ENST00000637450 GORASP1Q9BQQ3 440 aa18.06■□□□□ 0.48
CLN6-220ENST00000637450 C10orf88Q9H8K7 445 aa18.06■□□□□ 0.48
CLN6-220ENST00000637450 TFR2Q9UP52 801 aa18.06■□□□□ 0.48
CLN6-220ENST00000637450 SBDSQ9Y3A5 250 aaKnown RBP eCLIP18.06■□□□□ 0.48
CLN6-220ENST00000637450 PCDHGA6Q9Y5G7 932 aa18.06■□□□□ 0.48
CLN6-220ENST00000637450 PCDHA13Q9Y5I0 950 aa18.06■□□□□ 0.48
CLN6-220ENST00000637450 ARL5AQ9Y689 179 aa18.06■□□□□ 0.48
CLN6-220ENST00000637450 MGAT4DA6NG13 374 aa18.05■□□□□ 0.48
CLN6-220ENST00000637450 KATNA1O75449 491 aa18.05■□□□□ 0.48
CLN6-220ENST00000637450 ANXA9O76027 345 aa18.05■□□□□ 0.48
CLN6-220ENST00000637450 TIAF1O95411 115 aa18.05■□□□□ 0.48
CLN6-220ENST00000637450 RECKO95980 971 aa18.05■□□□□ 0.48
CLN6-220ENST00000637450 FURINP09958 794 aa18.05■□□□□ 0.48
CLN6-220ENST00000637450 MTHFD1P11586 935 aaKnown RBP18.05■□□□□ 0.48
CLN6-220ENST00000637450 MSH3P20585 1137 aa18.05■□□□□ 0.48
CLN6-220ENST00000637450 LPOP22079 712 aaPredicted RBP18.05■□□□□ 0.48
CLN6-220ENST00000637450 GEMP55040 296 aa18.05■□□□□ 0.48
CLN6-220ENST00000637450 TAF1AQ15573 450 aaPredicted RBP18.05■□□□□ 0.48
CLN6-220ENST00000637450 FNBP1LQ5T0N5 605 aa18.05■□□□□ 0.48
CLN6-220ENST00000637450 PWWP2BQ6NUJ5 590 aa18.05■□□□□ 0.48
CLN6-220ENST00000637450 RANBP10Q6VN20 620 aa18.05■□□□□ 0.48
CLN6-220ENST00000637450 BPHLQ86WA6 291 aaPredicted RBP18.05■□□□□ 0.48
CLN6-220ENST00000637450 BEND7Q8N7W2 519 aaPredicted RBP18.05■□□□□ 0.48
CLN6-220ENST00000637450 SIDT2Q8NBJ9 832 aaKnown RBP18.05■□□□□ 0.48
CLN6-220ENST00000637450 ZFPM2Q8WW38 1151 aa18.05■□□□□ 0.48
CLN6-220ENST00000637450 INSM2Q96T92 566 aaPredicted RBP18.05■□□□□ 0.48
CLN6-220ENST00000637450 MAP3K3Q99759 626 aa18.05■□□□□ 0.48
CLN6-220ENST00000637450 FICDQ9BVA6 458 aa18.05■□□□□ 0.48
CLN6-220ENST00000637450 GBA3Q9H227 469 aa18.05■□□□□ 0.48
CLN6-220ENST00000637450 LHX9Q9NQ69 397 aa18.05■□□□□ 0.48
CLN6-220ENST00000637450 RARRES3Q9UL19 164 aa18.05■□□□□ 0.48
CLN6-220ENST00000637450 ACSL5Q9ULC5 683 aa18.05■□□□□ 0.48
CLN6-220ENST00000637450 SPENQ96T58 3664 aaKnown RBP18.04■□□□□ 0.48
CLN6-220ENST00000637450 OR5K3A6NET4 321 aa18.04■□□□□ 0.48
CLN6-220ENST00000637450 C2orf81A6NN90 581 aa18.04■□□□□ 0.48
CLN6-220ENST00000637450 H7C0C1 242 aa18.04■□□□□ 0.48
CLN6-220ENST00000637450 CREG1O75629 220 aa18.04■□□□□ 0.48
CLN6-220ENST00000637450 PRAMEF1O95521 474 aa18.04■□□□□ 0.48
CLN6-220ENST00000637450 PBLDP30039 288 aaPredicted RBP18.04■□□□□ 0.48
CLN6-220ENST00000637450 AKT1P31749 480 aa18.04■□□□□ 0.48
CLN6-220ENST00000637450 ADRA1AP35348 466 aa18.04■□□□□ 0.48
CLN6-220ENST00000637450 ATP5OP48047 213 aa18.04■□□□□ 0.48
CLN6-220ENST00000637450 COPS2P61201 443 aa18.04■□□□□ 0.48
CLN6-220ENST00000637450 ACY1Q03154 408 aa18.04■□□□□ 0.48
CLN6-220ENST00000637450 TUBB3Q13509 450 aa18.04■□□□□ 0.48
CLN6-220ENST00000637450 KCNAB1Q14722 419 aa18.04■□□□□ 0.48
CLN6-220ENST00000637450 PLCL1Q15111 1095 aa18.04■□□□□ 0.48
CLN6-220ENST00000637450 LACTB2Q53H82 288 aaPredicted RBP18.04■□□□□ 0.48
CLN6-220ENST00000637450 DET1Q7L5Y6 550 aa18.04■□□□□ 0.48
CLN6-220ENST00000637450 KMT5CQ86Y97 462 aa18.04■□□□□ 0.48
CLN6-220ENST00000637450 CCDC170Q8IYT3 715 aa18.04■□□□□ 0.48
CLN6-220ENST00000637450 OR4K2Q8NGD2 314 aa18.04■□□□□ 0.48
CLN6-220ENST00000637450 OR2L2Q8NH16 312 aa18.04■□□□□ 0.48
CLN6-220ENST00000637450 CD180Q99467 661 aa18.04■□□□□ 0.48
CLN6-220ENST00000637450 WWP1Q9H0M0 922 aa18.04■□□□□ 0.48
CLN6-220ENST00000637450 IMP3Q9NV31 184 aaKnown RBP18.04■□□□□ 0.48
CLN6-220ENST00000637450 HRASLS2Q9NWW9 162 aa18.04■□□□□ 0.48
CLN6-220ENST00000637450 POLHQ9Y253 713 aa18.04■□□□□ 0.48
CLN6-220ENST00000637450 CFAP20Q9Y6A4 193 aaKnown RBP18.04■□□□□ 0.48
CLN6-220ENST00000637450 NBASA2RRP1 2371 aa18.04■□□□□ 0.48
CLN6-220ENST00000637450 KLHL33A6NCF5 533 aa18.03■□□□□ 0.48
CLN6-220ENST00000637450 C5orf60A6NFR6 353 aa18.03■□□□□ 0.48
CLN6-220ENST00000637450 SRP72O76094 671 aaKnown RBP18.03■□□□□ 0.48
CLN6-220ENST00000637450 FOXK1P85037 733 aa18.03■□□□□ 0.48
CLN6-220ENST00000637450 XIAPP98170 497 aa18.03■□□□□ 0.48
CLN6-220ENST00000637450 MSLNQ13421 630 aaPredicted RBP18.03■□□□□ 0.48
CLN6-220ENST00000637450 DNASE1L3Q13609 305 aa18.03■□□□□ 0.48
CLN6-220ENST00000637450 IGFBP7Q16270 282 aa18.03■□□□□ 0.48
CLN6-220ENST00000637450 BCL7AQ4VC05 210 aa18.03■□□□□ 0.48
CLN6-220ENST00000637450 COLEC12Q5KU26 742 aa18.03■□□□□ 0.48
CLN6-220ENST00000637450 DNTTIP2Q5QJE6 756 aaKnown RBP18.03■□□□□ 0.48
CLN6-220ENST00000637450 ITPRIPL1Q6GPH6 555 aa18.03■□□□□ 0.48
CLN6-220ENST00000637450 CERS6Q6ZMG9 384 aa18.03■□□□□ 0.48
CLN6-220ENST00000637450 DAAM2Q86T65 1068 aa18.03■□□□□ 0.48
CLN6-220ENST00000637450 D2HGDHQ8N465 521 aa18.03■□□□□ 0.48
CLN6-220ENST00000637450 CT55Q8WUE5 264 aa18.03■□□□□ 0.48
CLN6-220ENST00000637450 LINC00615Q96LM1 132 aaPredicted RBP18.03■□□□□ 0.48
CLN6-220ENST00000637450 ASB8Q9H765 288 aa18.03■□□□□ 0.48
CLN6-220ENST00000637450 AKIRIN1Q9H9L7 192 aaPredicted RBP18.03■□□□□ 0.48
CLN6-220ENST00000637450 FKBPLQ9UIM3 349 aa18.03■□□□□ 0.48
CLN6-220ENST00000637450 EFR3BQ9Y2G0 817 aa18.03■□□□□ 0.48
CLN6-220ENST00000637450 AAR2Q9Y312 384 aaKnown RBP18.03■□□□□ 0.48
CLN6-220ENST00000637450 PTPN13Q12923 2485 aa18.03■□□□□ 0.48
CLN6-220ENST00000637450 UBA6A0AVT1 1052 aaPredicted RBP18.02■□□□□ 0.48
CLN6-220ENST00000637450 PIPSLA2A3N6 862 aa18.02■□□□□ 0.48
CLN6-220ENST00000637450 CDC14CA4D256 554 aa18.02■□□□□ 0.48
CLN6-220ENST00000637450 TLCD2A6NGC4 264 aa18.02■□□□□ 0.48
CLN6-220ENST00000637450 AGAP14A8MT82 685 aa18.02■□□□□ 0.48
CLN6-220ENST00000637450 C21orf140B9A014 251 aa18.02■□□□□ 0.48
CLN6-220ENST00000637450 SGTAO43765 313 aa18.02■□□□□ 0.48
CLN6-220ENST00000637450 EBLN1P0CF75 366 aa18.02■□□□□ 0.48
CLN6-220ENST00000637450 PYGMP11217 842 aa18.02■□□□□ 0.48
CLN6-220ENST00000637450 ARL4DP49703 201 aa18.02■□□□□ 0.48
CLN6-220ENST00000637450 HSD11B2P80365 405 aa18.02■□□□□ 0.48
CLN6-220ENST00000637450 OTUD4Q01804 1114 aaKnown RBP18.02■□□□□ 0.48
CLN6-220ENST00000637450 OLIG2Q13516 323 aa18.02■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms