RNA–Protein interactions for RNA: ENST00000634889.1

CDC42BPB-209, Transcript of CDC42 binding protein kinase beta, humanhuman

TSL 3

Gene CDC42BPB, Length 507 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPB-209ENST00000634889 PPM1DO15297 605 aa14.46□□□□□ -0.09
CDC42BPB-209ENST00000634889 OR1I1O60431 355 aa14.46□□□□□ -0.09
CDC42BPB-209ENST00000634889 RPLP0P05388 317 aaKnown RBP14.46□□□□□ -0.09
CDC42BPB-209ENST00000634889 JUPP14923 745 aa14.46□□□□□ -0.09
CDC42BPB-209ENST00000634889 ADARP55265 1226 aaKnown RBP14.46□□□□□ -0.09
CDC42BPB-209ENST00000634889 RPA4Q13156 261 aa14.46□□□□□ -0.09
CDC42BPB-209ENST00000634889 SPIDRQ14159 915 aa14.46□□□□□ -0.09
CDC42BPB-209ENST00000634889 CRYMQ14894 314 aa14.46□□□□□ -0.09
CDC42BPB-209ENST00000634889 CLPPQ16740 277 aaPredicted RBP14.46□□□□□ -0.09
CDC42BPB-209ENST00000634889 BBS9Q3SYG4 887 aa14.46□□□□□ -0.09
CDC42BPB-209ENST00000634889 MSS51Q4VC12 460 aa14.46□□□□□ -0.09
CDC42BPB-209ENST00000634889 NEPROQ6NW34 567 aa14.46□□□□□ -0.09
CDC42BPB-209ENST00000634889 RBM44Q6ZP01 1051 aaKnown RBP14.46□□□□□ -0.09
CDC42BPB-209ENST00000634889 TRIM48Q8IWZ4 208 aa14.46□□□□□ -0.09
CDC42BPB-209ENST00000634889 RBM12BQ8IXT5 1001 aaKnown RBP14.46□□□□□ -0.09
CDC42BPB-209ENST00000634889 OTUD6BQ8N6M0 293 aa14.46□□□□□ -0.09
CDC42BPB-209ENST00000634889 CALML6Q8TD86 181 aa14.46□□□□□ -0.09
CDC42BPB-209ENST00000634889 GRAMD1AQ96CP6 724 aa14.46□□□□□ -0.09
CDC42BPB-209ENST00000634889 DEPDC7Q96QD5 511 aa14.46□□□□□ -0.09
CDC42BPB-209ENST00000634889 GFM1Q96RP9 751 aaKnown RBP14.46□□□□□ -0.09
CDC42BPB-209ENST00000634889 P2RY12Q9H244 342 aa14.46□□□□□ -0.09
CDC42BPB-209ENST00000634889 LRRN3Q9H3W5 708 aa14.46□□□□□ -0.09
CDC42BPB-209ENST00000634889 SCHIP1Q9P0W5 487 aaPredicted RBP14.46□□□□□ -0.09
CDC42BPB-209ENST00000634889 ZNF624Q9P2J8 865 aaPredicted RBP14.46□□□□□ -0.09
CDC42BPB-209ENST00000634889 VPS9D1Q9Y2B5 631 aa14.46□□□□□ -0.09
CDC42BPB-209ENST00000634889 WDR37Q9Y2I8 494 aa14.46□□□□□ -0.09
CDC42BPB-209ENST00000634889 PRSS21Q9Y6M0 314 aa14.46□□□□□ -0.09
CDC42BPB-209ENST00000634889 FAM169AQ9Y6X4 670 aa14.46□□□□□ -0.09
CDC42BPB-209ENST00000634889 TRBV23OR9-2A0A075B6M9 112 aa14.45□□□□□ -0.1
CDC42BPB-209ENST00000634889 A0A1W2PQM1 296 aa14.45□□□□□ -0.1
CDC42BPB-209ENST00000634889 CTAGE15A4D2H0 777 aa14.45□□□□□ -0.1
CDC42BPB-209ENST00000634889 D6RAR5 112 aa14.45□□□□□ -0.1
CDC42BPB-209ENST00000634889 E7ESA3 106 aa14.45□□□□□ -0.1
CDC42BPB-209ENST00000634889 LIN7AO14910 233 aaPredicted RBP14.45□□□□□ -0.1
CDC42BPB-209ENST00000634889 NDUFS3O75489 264 aa14.45□□□□□ -0.1
CDC42BPB-209ENST00000634889 MT-CO3P00414 261 aa14.45□□□□□ -0.1
CDC42BPB-209ENST00000634889 SLC35G4P0C7Q5 338 aa14.45□□□□□ -0.1
CDC42BPB-209ENST00000634889 CTAGE8P0CG41 777 aa14.45□□□□□ -0.1
CDC42BPB-209ENST00000634889 SPINK2P20155 84 aa14.45□□□□□ -0.1
CDC42BPB-209ENST00000634889 RPS3P23396 243 aaKnown RBP eCLIP14.45□□□□□ -0.1
CDC42BPB-209ENST00000634889 SLC19A1P41440 591 aa14.45□□□□□ -0.1
CDC42BPB-209ENST00000634889 EPHA4P54764 986 aa14.45□□□□□ -0.1
CDC42BPB-209ENST00000634889 CCL7P80098 99 aa14.45□□□□□ -0.1
CDC42BPB-209ENST00000634889 GPLD1P80108 840 aa14.45□□□□□ -0.1
CDC42BPB-209ENST00000634889 MRPS25P82663 173 aaKnown RBP14.45□□□□□ -0.1
CDC42BPB-209ENST00000634889 PLOD1Q02809 727 aaPredicted RBP14.45□□□□□ -0.1
CDC42BPB-209ENST00000634889 CAV1Q03135 178 aa14.45□□□□□ -0.1
CDC42BPB-209ENST00000634889 THOC5Q13769 683 aaKnown RBP14.45□□□□□ -0.1
CDC42BPB-209ENST00000634889 CLCA4Q14CN2 919 aa14.45□□□□□ -0.1
CDC42BPB-209ENST00000634889 SPANXN3Q5MJ09 141 aa14.45□□□□□ -0.1
CDC42BPB-209ENST00000634889 ZNF449Q6P9G9 518 aa14.45□□□□□ -0.1
CDC42BPB-209ENST00000634889 XKR5Q6UX68 686 aa14.45□□□□□ -0.1
CDC42BPB-209ENST00000634889 CCNI2Q6ZMN8 369 aaPredicted RBP14.45□□□□□ -0.1
CDC42BPB-209ENST00000634889 LDB1Q86U70 411 aaPredicted RBP14.45□□□□□ -0.1
CDC42BPB-209ENST00000634889 CTAGE6Q86UF2 777 aa14.45□□□□□ -0.1
CDC42BPB-209ENST00000634889 CILP2Q8IUL8 1156 aa14.45□□□□□ -0.1
CDC42BPB-209ENST00000634889 CTAGE4Q8IX94 777 aa14.45□□□□□ -0.1
CDC42BPB-209ENST00000634889 CFAP206Q8IYR0 622 aa14.45□□□□□ -0.1
CDC42BPB-209ENST00000634889 MMGT1Q8N4V1 131 aa14.45□□□□□ -0.1
CDC42BPB-209ENST00000634889 Q8N9G6 341 aaPredicted RBP14.45□□□□□ -0.1
CDC42BPB-209ENST00000634889 GABPB2Q8TAK5 448 aaPredicted RBP14.45□□□□□ -0.1
CDC42BPB-209ENST00000634889 CXorf40BQ96DE9 158 aa14.45□□□□□ -0.1
CDC42BPB-209ENST00000634889 SLC38A3Q99624 504 aa14.45□□□□□ -0.1
CDC42BPB-209ENST00000634889 FAM167BQ9BTA0 163 aa14.45□□□□□ -0.1
CDC42BPB-209ENST00000634889 DPH5Q9H2P9 285 aa14.45□□□□□ -0.1
CDC42BPB-209ENST00000634889 EPB41L1Q9H4G0 881 aa14.45□□□□□ -0.1
CDC42BPB-209ENST00000634889 COG4Q9H9E3 785 aa14.45□□□□□ -0.1
CDC42BPB-209ENST00000634889 SLC40A1Q9NP59 571 aa14.45□□□□□ -0.1
CDC42BPB-209ENST00000634889 INTS10Q9NVR2 710 aaKnown RBP14.45□□□□□ -0.1
CDC42BPB-209ENST00000634889 GRHL1Q9NZI5 618 aa14.45□□□□□ -0.1
CDC42BPB-209ENST00000634889 GNPTGQ9UJJ9 305 aa14.45□□□□□ -0.1
CDC42BPB-209ENST00000634889 PCDHB1Q9Y5F3 818 aa14.45□□□□□ -0.1
CDC42BPB-209ENST00000634889 TEX264Q9Y6I9 313 aa14.45□□□□□ -0.1
CDC42BPB-209ENST00000634889 PIKFYVEQ9Y2I7 2098 aa14.45□□□□□ -0.1
CDC42BPB-209ENST00000634889 RP1P56715 2156 aa14.44□□□□□ -0.1
CDC42BPB-209ENST00000634889 SPTBN2O15020 2390 aa14.44□□□□□ -0.1
CDC42BPB-209ENST00000634889 LILRA5A6NI73 299 aa14.44□□□□□ -0.1
CDC42BPB-209ENST00000634889 OR52A4PA6NMU1 304 aa14.44□□□□□ -0.1
CDC42BPB-209ENST00000634889 GOLGA8KD6RF30 607 aa14.44□□□□□ -0.1
CDC42BPB-209ENST00000634889 GOLGA8TH3BQL2 631 aa14.44□□□□□ -0.1
CDC42BPB-209ENST00000634889 BANF1O75531 89 aa14.44□□□□□ -0.1
CDC42BPB-209ENST00000634889 VIPP01282 170 aa14.44□□□□□ -0.1
CDC42BPB-209ENST00000634889 ALDH4A1P30038 563 aa14.44□□□□□ -0.1
CDC42BPB-209ENST00000634889 ELK3P41970 407 aa14.44□□□□□ -0.1
CDC42BPB-209ENST00000634889 CLDN6P56747 220 aa14.44□□□□□ -0.1
CDC42BPB-209ENST00000634889 SQSTM1Q13501 440 aa14.44□□□□□ -0.1
CDC42BPB-209ENST00000634889 ZNF470Q6ECI4 717 aa14.44□□□□□ -0.1
CDC42BPB-209ENST00000634889 CAPRIN2Q6IMN6 1127 aaKnown RBP14.44□□□□□ -0.1
CDC42BPB-209ENST00000634889 OR10G6Q8NH81 332 aa14.44□□□□□ -0.1
CDC42BPB-209ENST00000634889 LPGAT1Q92604 370 aa14.44□□□□□ -0.1
CDC42BPB-209ENST00000634889 PWWP2AQ96N64 755 aa14.44□□□□□ -0.1
CDC42BPB-209ENST00000634889 PANX3Q96QZ0 392 aa14.44□□□□□ -0.1
CDC42BPB-209ENST00000634889 DPYSL5Q9BPU6 564 aa14.44□□□□□ -0.1
CDC42BPB-209ENST00000634889 CARD6Q9BX69 1037 aa14.44□□□□□ -0.1
CDC42BPB-209ENST00000634889 PHACTR1Q9C0D0 580 aa14.44□□□□□ -0.1
CDC42BPB-209ENST00000634889 WWP1Q9H0M0 922 aa14.44□□□□□ -0.1
CDC42BPB-209ENST00000634889 SYNDIG1Q9H7V2 258 aa14.44□□□□□ -0.1
CDC42BPB-209ENST00000634889 C20orf96Q9NUD7 363 aaPredicted RBP14.44□□□□□ -0.1
CDC42BPB-209ENST00000634889 KCNK4Q9NYG8 393 aa14.44□□□□□ -0.1
CDC42BPB-209ENST00000634889 FAM8A1Q9UBU6 413 aa14.44□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms