RNA–Protein interactions for RNA: ENST00000628962.1

VPS8-228, Transcript of VPS8, CORVET complex subunit, humanhuman

TSL 5 BASIC

Gene VPS8, Length 207 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-228ENST00000628962 KIAA1755Q5JYT7 1200 aa3.2□□□□□ -1.9
VPS8-228ENST00000628962 ARMC4Q5T2S8 1044 aa3.2□□□□□ -1.9
VPS8-228ENST00000628962 C9orf57Q5W0N0 161 aa3.2□□□□□ -1.9
VPS8-228ENST00000628962 SPSB3Q6PJ21 355 aa3.2□□□□□ -1.9
VPS8-228ENST00000628962 SUSD1Q6UWL2 747 aa3.2□□□□□ -1.9
VPS8-228ENST00000628962 RBPMS2Q6ZRY4 209 aaKnown RBP3.2□□□□□ -1.9
VPS8-228ENST00000628962 HIST3H2AQ7L7L0 130 aa3.2□□□□□ -1.9
VPS8-228ENST00000628962 CAMKMTQ7Z624 323 aa3.2□□□□□ -1.9
VPS8-228ENST00000628962 ADCK2Q7Z695 626 aa3.2□□□□□ -1.9
VPS8-228ENST00000628962 TMC8Q8IU68 726 aa3.2□□□□□ -1.9
VPS8-228ENST00000628962 GUF1Q8N442 669 aaKnown RBP3.2□□□□□ -1.9
VPS8-228ENST00000628962 IQUBQ8NA54 791 aa3.2□□□□□ -1.9
VPS8-228ENST00000628962 CMASQ8NFW8 434 aaPredicted RBP3.2□□□□□ -1.9
VPS8-228ENST00000628962 OR14L1PQ8NHC6 308 aa3.2□□□□□ -1.9
VPS8-228ENST00000628962 MOSPD2Q8NHP6 518 aa3.2□□□□□ -1.9
VPS8-228ENST00000628962 HUS1BQ8NHY5 278 aa3.2□□□□□ -1.9
VPS8-228ENST00000628962 GRK7Q8WTQ7 553 aa3.2□□□□□ -1.9
VPS8-228ENST00000628962 PTPMT1Q8WUK0 201 aaPredicted RBP3.2□□□□□ -1.9
VPS8-228ENST00000628962 KAT2AQ92830 837 aa3.2□□□□□ -1.9
VPS8-228ENST00000628962 SNX21Q969T3 373 aa3.2□□□□□ -1.9
VPS8-228ENST00000628962 OTULINQ96BN8 352 aa3.2□□□□□ -1.9
VPS8-228ENST00000628962 RRNAD1Q96FB5 475 aaKnown RBP3.2□□□□□ -1.9
VPS8-228ENST00000628962 ABHD8Q96I13 439 aa3.2□□□□□ -1.9
VPS8-228ENST00000628962 CCDC43Q96MW1 224 aaKnown RBP3.2□□□□□ -1.9
VPS8-228ENST00000628962 CDRT15Q96T59 188 aa3.2□□□□□ -1.9
VPS8-228ENST00000628962 SLC25A23Q9BV35 468 aa3.2□□□□□ -1.9
VPS8-228ENST00000628962 NUP85Q9BW27 656 aa3.2□□□□□ -1.9
VPS8-228ENST00000628962 CDT1Q9H211 546 aa3.2□□□□□ -1.9
VPS8-228ENST00000628962 ST6GALNAC4Q9H4F1 302 aa3.2□□□□□ -1.9
VPS8-228ENST00000628962 TASP1Q9H6P5 420 aa3.2□□□□□ -1.9
VPS8-228ENST00000628962 MBNL1Q9NR56 388 aaKnown RBP3.2□□□□□ -1.9
VPS8-228ENST00000628962 SIRT3Q9NTG7 399 aaPredicted RBP3.2□□□□□ -1.9
VPS8-228ENST00000628962 DDX43Q9NXZ2 648 aaKnown RBP3.2□□□□□ -1.9
VPS8-228ENST00000628962 DNAJB9Q9UBS3 223 aa3.2□□□□□ -1.9
VPS8-228ENST00000628962 ERVK-11Q9UQG0 969 aa3.2□□□□□ -1.9
VPS8-228ENST00000628962 ZNF148Q9UQR1 794 aa3.2□□□□□ -1.9
VPS8-228ENST00000628962 CEPT1Q9Y6K0 416 aa3.2□□□□□ -1.9
VPS8-228ENST00000628962 PLEKHG1Q9ULL1 1385 aa3.2□□□□□ -1.9
VPS8-228ENST00000628962 C1orf167Q5SNV9 1468 aa3.2□□□□□ -1.9
VPS8-228ENST00000628962 CASZ1Q86V15 1759 aa3.2□□□□□ -1.9
VPS8-228ENST00000628962 DLC1Q96QB1 1528 aa3.19□□□□□ -1.9
VPS8-228ENST00000628962 PREX2Q70Z35 1606 aa3.19□□□□□ -1.9
VPS8-228ENST00000628962 RGPD1P0DJD0 1748 aa3.19□□□□□ -1.9
VPS8-228ENST00000628962 NUP188Q5SRE5 1749 aa3.19□□□□□ -1.9
VPS8-228ENST00000628962 EDDM13A0A1B0GTR0 161 aa3.19□□□□□ -1.9
VPS8-228ENST00000628962 A0A1B0GVM2 712 aa3.19□□□□□ -1.9
VPS8-228ENST00000628962 A0A1B0GVY2 172 aa3.19□□□□□ -1.9
VPS8-228ENST00000628962 C1orf226A1L170 272 aa3.19□□□□□ -1.9
VPS8-228ENST00000628962 C17orf102A2RUQ5 167 aa3.19□□□□□ -1.9
VPS8-228ENST00000628962 RHODO00212 210 aa3.19□□□□□ -1.9
VPS8-228ENST00000628962 MDM4O15151 490 aa3.19□□□□□ -1.9
VPS8-228ENST00000628962 DAB1O75553 588 aa3.19□□□□□ -1.9
VPS8-228ENST00000628962 JRKO75564 520 aa3.19□□□□□ -1.9
VPS8-228ENST00000628962 NEURL1O76050 574 aa3.19□□□□□ -1.9
VPS8-228ENST00000628962 SLCO2B1O94956 709 aa3.19□□□□□ -1.9
VPS8-228ENST00000628962 TRUB2O95900 331 aaKnown RBP3.19□□□□□ -1.9
VPS8-228ENST00000628962 BCL10O95999 233 aa3.19□□□□□ -1.9
VPS8-228ENST00000628962 PENKP01210 267 aaPredicted RBP3.19□□□□□ -1.9
VPS8-228ENST00000628962 VPREB1P12018 145 aa3.19□□□□□ -1.9
VPS8-228ENST00000628962 SRD5A1P18405 259 aa3.19□□□□□ -1.9
VPS8-228ENST00000628962 SHMT1P34896 483 aa3.19□□□□□ -1.9
VPS8-228ENST00000628962 PCYT1AP49585 367 aa3.19□□□□□ -1.9
VPS8-228ENST00000628962 PDLIM4P50479 330 aa3.19□□□□□ -1.9
VPS8-228ENST00000628962 SUOXP51687 545 aa3.19□□□□□ -1.9
VPS8-228ENST00000628962 GPR143P51810 404 aa3.19□□□□□ -1.9
VPS8-228ENST00000628962 BMXP51813 675 aa3.19□□□□□ -1.9
VPS8-228ENST00000628962 CAPZA1P52907 286 aa3.19□□□□□ -1.9
VPS8-228ENST00000628962 TAS2R40P59535 323 aa3.19□□□□□ -1.9
VPS8-228ENST00000628962 KRTAP10-3P60369 221 aa3.19□□□□□ -1.9
VPS8-228ENST00000628962 MRPS34P82930 218 aaKnown RBP3.19□□□□□ -1.9
VPS8-228ENST00000628962 YWHAHQ04917 246 aaPredicted RBP3.19□□□□□ -1.9
VPS8-228ENST00000628962 CXCL9Q07325 125 aa3.19□□□□□ -1.9
VPS8-228ENST00000628962 AP1B1Q10567 949 aa3.19□□□□□ -1.9
VPS8-228ENST00000628962 GRSF1Q12849 480 aaKnown RBP eCLIP3.19□□□□□ -1.9
VPS8-228ENST00000628962 COASYQ13057 564 aa3.19□□□□□ -1.9
VPS8-228ENST00000628962 NAE1Q13564 534 aa3.19□□□□□ -1.9
VPS8-228ENST00000628962 NFE2L1Q14494 772 aa3.19□□□□□ -1.9
VPS8-228ENST00000628962 KRT33BQ14525 404 aa3.19□□□□□ -1.9
VPS8-228ENST00000628962 SNAPC1Q16533 368 aa3.19□□□□□ -1.9
VPS8-228ENST00000628962 KRT24Q2M2I5 525 aa3.19□□□□□ -1.9
VPS8-228ENST00000628962 HYAL4Q2M3T9 481 aa3.19□□□□□ -1.9
VPS8-228ENST00000628962 ZNF718Q3SXZ3 478 aa3.19□□□□□ -1.9
VPS8-228ENST00000628962 SOWAHCQ53LP3 525 aaPredicted RBP3.19□□□□□ -1.9
VPS8-228ENST00000628962 ESCO2Q56NI9 601 aa3.19□□□□□ -1.9
VPS8-228ENST00000628962 RARS2Q5T160 578 aaKnown RBP3.19□□□□□ -1.9
VPS8-228ENST00000628962 LRIF1Q5T3J3 769 aa3.19□□□□□ -1.9
VPS8-228ENST00000628962 C6orf163Q5TEZ5 329 aa3.19□□□□□ -1.9
VPS8-228ENST00000628962 KRT39Q6A163 491 aa3.19□□□□□ -1.9
VPS8-228ENST00000628962 AAGABQ6PD74 315 aa3.19□□□□□ -1.9
VPS8-228ENST00000628962 IYDQ6PHW0 289 aa3.19□□□□□ -1.9
VPS8-228ENST00000628962 FBXO46Q6PJ61 603 aaPredicted RBP3.19□□□□□ -1.9
VPS8-228ENST00000628962 LIN28BQ6ZN17 250 aaKnown RBP eCLIP3.19□□□□□ -1.9
VPS8-228ENST00000628962 TAOK1Q7L7X3 1001 aa3.19□□□□□ -1.9
VPS8-228ENST00000628962 C16orf82Q7Z2V1 217 aa3.19□□□□□ -1.9
VPS8-228ENST00000628962 ARMC9Q7Z3E5 817 aa3.19□□□□□ -1.9
VPS8-228ENST00000628962 PIWIL3Q7Z3Z3 882 aaKnown RBP3.19□□□□□ -1.9
VPS8-228ENST00000628962 SERPINA11Q86U17 422 aa3.19□□□□□ -1.9
VPS8-228ENST00000628962 NOXA1Q86UR1 476 aa3.19□□□□□ -1.9
VPS8-228ENST00000628962 TRIM74Q86UV6 250 aa3.19□□□□□ -1.9
VPS8-228ENST00000628962 TRIM73Q86UV7 250 aa3.19□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 72.3 ms