RNA–Protein interactions for RNA: ENST00000628881.1

PFDN5-220, Transcript of prefoldin subunit 5, humanhuman

TSL 3 BASIC

Gene PFDN5, Length 231 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN5-220ENST00000628881 NDC80O14777 642 aa13.39□□□□□ -0.27
PFDN5-220ENST00000628881 OR1I1O60431 355 aa13.39□□□□□ -0.27
PFDN5-220ENST00000628881 URI1O94763 535 aaPredicted RBP13.39□□□□□ -0.27
PFDN5-220ENST00000628881 USP1O94782 785 aa13.39□□□□□ -0.27
PFDN5-220ENST00000628881 CPNE6O95741 557 aa13.39□□□□□ -0.27
PFDN5-220ENST00000628881 FTH1P02794 183 aa13.39□□□□□ -0.27
PFDN5-220ENST00000628881 C1QTNF9P0C862 333 aa13.39□□□□□ -0.27
PFDN5-220ENST00000628881 CD1CP29017 333 aa13.39□□□□□ -0.27
PFDN5-220ENST00000628881 ARCN1P48444 511 aaKnown RBP13.39□□□□□ -0.27
PFDN5-220ENST00000628881 ITGA8P53708 1063 aa13.39□□□□□ -0.27
PFDN5-220ENST00000628881 EPHA4P54764 986 aa13.39□□□□□ -0.27
PFDN5-220ENST00000628881 AMZ1Q400G9 498 aa13.39□□□□□ -0.27
PFDN5-220ENST00000628881 MAP9Q49MG5 647 aa13.39□□□□□ -0.27
PFDN5-220ENST00000628881 ZNF658BQ4V348 819 aaPredicted RBP13.39□□□□□ -0.27
PFDN5-220ENST00000628881 MRNIPQ6NTE8 343 aa13.39□□□□□ -0.27
PFDN5-220ENST00000628881 HIBCHQ6NVY1 386 aaPredicted RBP13.39□□□□□ -0.27
PFDN5-220ENST00000628881 LDB1Q86U70 411 aaPredicted RBP13.39□□□□□ -0.27
PFDN5-220ENST00000628881 RBM12BQ8IXT5 1001 aaKnown RBP13.39□□□□□ -0.27
PFDN5-220ENST00000628881 OTUD6BQ8N6M0 293 aa13.39□□□□□ -0.27
PFDN5-220ENST00000628881 CXorf40BQ96DE9 158 aa13.39□□□□□ -0.27
PFDN5-220ENST00000628881 STAMBPL1Q96FJ0 436 aa13.39□□□□□ -0.27
PFDN5-220ENST00000628881 TMEM74Q96NL1 305 aa13.39□□□□□ -0.27
PFDN5-220ENST00000628881 FCRL3Q96P31 734 aaPredicted RBP13.39□□□□□ -0.27
PFDN5-220ENST00000628881 TRIM56Q9BRZ2 755 aaKnown RBP13.39□□□□□ -0.27
PFDN5-220ENST00000628881 TRIM31Q9BZY9 425 aa13.39□□□□□ -0.27
PFDN5-220ENST00000628881 NRSN2Q9GZP1 204 aa13.39□□□□□ -0.27
PFDN5-220ENST00000628881 WWP1Q9H0M0 922 aa13.39□□□□□ -0.27
PFDN5-220ENST00000628881 COG4Q9H9E3 785 aa13.39□□□□□ -0.27
PFDN5-220ENST00000628881 ATXN7L1Q9ULK2 861 aaPredicted RBP13.39□□□□□ -0.27
PFDN5-220ENST00000628881 PSMD13Q9UNM6 376 aa13.39□□□□□ -0.27
PFDN5-220ENST00000628881 ENTPD2Q9Y5L3 495 aa13.39□□□□□ -0.27
PFDN5-220ENST00000628881 PIKFYVEQ9Y2I7 2098 aa13.38□□□□□ -0.27
PFDN5-220ENST00000628881 ZCWPW2A0A1B0GU75 182 aa13.38□□□□□ -0.27
PFDN5-220ENST00000628881 TRABD2BA6NFA1 517 aa13.38□□□□□ -0.27
PFDN5-220ENST00000628881 TMX2-CTNND1H3BSU7 103 aa13.38□□□□□ -0.27
PFDN5-220ENST00000628881 PRMT5O14744 637 aaPredicted RBP13.38□□□□□ -0.27
PFDN5-220ENST00000628881 RAD51CO43502 376 aa13.38□□□□□ -0.27
PFDN5-220ENST00000628881 DUX1O43812 170 aa13.38□□□□□ -0.27
PFDN5-220ENST00000628881 POLBP06746 335 aa13.38□□□□□ -0.27
PFDN5-220ENST00000628881 SLC35G4P0C7Q5 338 aa13.38□□□□□ -0.27
PFDN5-220ENST00000628881 PGAM1P18669 254 aa13.38□□□□□ -0.27
PFDN5-220ENST00000628881 OGNP20774 298 aaKnown RBP13.38□□□□□ -0.27
PFDN5-220ENST00000628881 CCKBRP32239 447 aa13.38□□□□□ -0.27
PFDN5-220ENST00000628881 RPL21P46778 160 aaKnown RBP13.38□□□□□ -0.27
PFDN5-220ENST00000628881 INHBCP55103 352 aa13.38□□□□□ -0.27
PFDN5-220ENST00000628881 MRPS25P82663 173 aaKnown RBP13.38□□□□□ -0.27
PFDN5-220ENST00000628881 DHX9Q08211 1270 aaKnown RBP13.38□□□□□ -0.27
PFDN5-220ENST00000628881 RPA4Q13156 261 aa13.38□□□□□ -0.27
PFDN5-220ENST00000628881 SQSTM1Q13501 440 aa13.38□□□□□ -0.27
PFDN5-220ENST00000628881 RPE65Q16518 533 aa13.38□□□□□ -0.27
PFDN5-220ENST00000628881 WHAMMP3Q1A5X7 153 aa13.38□□□□□ -0.27
PFDN5-220ENST00000628881 TYSND1Q2T9J0 566 aa13.38□□□□□ -0.27
PFDN5-220ENST00000628881 NKAIN2Q5VXU1 208 aa13.38□□□□□ -0.27
PFDN5-220ENST00000628881 TMEM26Q6ZUK4 368 aa13.38□□□□□ -0.27
PFDN5-220ENST00000628881 B3GNT8Q7Z7M8 397 aa13.38□□□□□ -0.27
PFDN5-220ENST00000628881 SDCCAG8Q86SQ7 713 aaPredicted RBP13.38□□□□□ -0.27
PFDN5-220ENST00000628881 PIM3Q86V86 326 aa13.38□□□□□ -0.27
PFDN5-220ENST00000628881 PDIK1LQ8N165 341 aa13.38□□□□□ -0.27
PFDN5-220ENST00000628881 LILRA3Q8N6C8 439 aaPredicted RBP13.38□□□□□ -0.27
PFDN5-220ENST00000628881 BBOF1Q8ND07 529 aa13.38□□□□□ -0.27
PFDN5-220ENST00000628881 GPR150Q8NGU9 434 aa13.38□□□□□ -0.27
PFDN5-220ENST00000628881 OR10G6Q8NH81 332 aa13.38□□□□□ -0.27
PFDN5-220ENST00000628881 ZNF592Q92610 1267 aa13.38□□□□□ -0.27
PFDN5-220ENST00000628881 NXPE2Q96DL1 559 aa13.38□□□□□ -0.27
PFDN5-220ENST00000628881 ATXN7L3BQ96GX2 97 aa13.38□□□□□ -0.27
PFDN5-220ENST00000628881 AHCYL2Q96HN2 611 aaKnown RBP13.38□□□□□ -0.27
PFDN5-220ENST00000628881 ERP44Q9BS26 406 aa13.38□□□□□ -0.27
PFDN5-220ENST00000628881 TBC1D10AQ9BXI6 508 aa13.38□□□□□ -0.27
PFDN5-220ENST00000628881 EPB41L1Q9H4G0 881 aa13.38□□□□□ -0.27
PFDN5-220ENST00000628881 SLC40A1Q9NP59 571 aa13.38□□□□□ -0.27
PFDN5-220ENST00000628881 ASPMQ8IZT6 3477 aa13.37□□□□□ -0.27
PFDN5-220ENST00000628881 TMEM8BA6NDV4 472 aa13.37□□□□□ -0.27
PFDN5-220ENST00000628881 GOLGA8KD6RF30 607 aa13.37□□□□□ -0.27
PFDN5-220ENST00000628881 GOLGA8TH3BQL2 631 aa13.37□□□□□ -0.27
PFDN5-220ENST00000628881 LIN7AO14910 233 aaPredicted RBP13.37□□□□□ -0.27
PFDN5-220ENST00000628881 PFDN6O15212 129 aa13.37□□□□□ -0.27
PFDN5-220ENST00000628881 NDUFS3O75489 264 aa13.37□□□□□ -0.27
PFDN5-220ENST00000628881 MTHFD1P11586 935 aaKnown RBP13.37□□□□□ -0.27
PFDN5-220ENST00000628881 CSF2RBP32927 897 aa13.37□□□□□ -0.27
PFDN5-220ENST00000628881 ZFP36L1Q07352 338 aaKnown RBP13.37□□□□□ -0.27
PFDN5-220ENST00000628881 RTP5Q14D33 572 aa13.37□□□□□ -0.27
PFDN5-220ENST00000628881 HIF1AQ16665 826 aa13.37□□□□□ -0.27
PFDN5-220ENST00000628881 LONRF1Q17RB8 773 aa13.37□□□□□ -0.27
PFDN5-220ENST00000628881 BBS9Q3SYG4 887 aa13.37□□□□□ -0.27
PFDN5-220ENST00000628881 MSS51Q4VC12 460 aa13.37□□□□□ -0.27
PFDN5-220ENST00000628881 RNF187Q5TA31 235 aaPredicted RBP13.37□□□□□ -0.27
PFDN5-220ENST00000628881 CAPRIN2Q6IMN6 1127 aaKnown RBP13.37□□□□□ -0.27
PFDN5-220ENST00000628881 NEPROQ6NW34 567 aa13.37□□□□□ -0.27
PFDN5-220ENST00000628881 ZNF449Q6P9G9 518 aa13.37□□□□□ -0.27
PFDN5-220ENST00000628881 USP53Q70EK8 1073 aa13.37□□□□□ -0.27
PFDN5-220ENST00000628881 TMPRSS9Q7Z410 1059 aa13.37□□□□□ -0.27
PFDN5-220ENST00000628881 LRRC6Q86X45 466 aa13.37□□□□□ -0.27
PFDN5-220ENST00000628881 SLITRK4Q8IW52 837 aa13.37□□□□□ -0.27
PFDN5-220ENST00000628881 ELMO1Q92556 727 aa13.37□□□□□ -0.27
PFDN5-220ENST00000628881 LIN37Q96GY3 246 aaPredicted RBP13.37□□□□□ -0.27
PFDN5-220ENST00000628881 RMDN2Q96LZ7 410 aa13.37□□□□□ -0.27
PFDN5-220ENST00000628881 C12orf66Q96MD2 445 aa13.37□□□□□ -0.27
PFDN5-220ENST00000628881 CNTNAP3BQ96NU0 1288 aa13.37□□□□□ -0.27
PFDN5-220ENST00000628881 INSM2Q96T92 566 aaPredicted RBP13.37□□□□□ -0.27
PFDN5-220ENST00000628881 TCF12Q99081 682 aa13.37□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 63.4 ms