RNA–Protein interactions for RNA: ENST00000627371.1

PTCD3-220, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 5 BASIC

Gene PTCD3, Length 210 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-220ENST00000627371 GUCY2DQ02846 1103 aa19.92■□□□□ 0.78
PTCD3-220ENST00000627371 ZNF658BQ4V348 819 aaPredicted RBP19.92■□□□□ 0.78
PTCD3-220ENST00000627371 STEAP4Q687X5 459 aa19.92■□□□□ 0.78
PTCD3-220ENST00000627371 ZNF470Q6ECI4 717 aa19.92■□□□□ 0.78
PTCD3-220ENST00000627371 DHRS13Q6UX07 377 aa19.92■□□□□ 0.78
PTCD3-220ENST00000627371 XKR5Q6UX68 686 aa19.92■□□□□ 0.78
PTCD3-220ENST00000627371 ZDHHC24Q6UX98 284 aa19.92■□□□□ 0.78
PTCD3-220ENST00000627371 UNC5AQ6ZN44 842 aa19.92■□□□□ 0.78
PTCD3-220ENST00000627371 ZNF438Q7Z4V0 828 aa19.92■□□□□ 0.78
PTCD3-220ENST00000627371 RAB44Q7Z6P3 723 aaPredicted RBP19.92■□□□□ 0.78
PTCD3-220ENST00000627371 KCNMB4Q86W47 210 aa19.92■□□□□ 0.78
PTCD3-220ENST00000627371 CALML6Q8TD86 181 aa19.92■□□□□ 0.78
PTCD3-220ENST00000627371 PHACTR1Q9C0D0 580 aa19.92■□□□□ 0.78
PTCD3-220ENST00000627371 L2HGDHQ9H9P8 463 aa19.92■□□□□ 0.78
PTCD3-220ENST00000627371 PLAC1Q9HBJ0 212 aa19.92■□□□□ 0.78
PTCD3-220ENST00000627371 LRIT1Q9P2V4 623 aa19.92■□□□□ 0.78
PTCD3-220ENST00000627371 ESPNB1AK53 854 aa19.91■□□□□ 0.78
PTCD3-220ENST00000627371 NR1D2Q14995 579 aa19.91■□□□□ 0.78
PTCD3-220ENST00000627371 FASTKD3Q14CZ7 662 aaKnown RBP19.91■□□□□ 0.78
PTCD3-220ENST00000627371 SLC9B2Q86UD5 537 aa19.91■□□□□ 0.78
PTCD3-220ENST00000627371 LRRC6Q86X45 466 aa19.91■□□□□ 0.78
PTCD3-220ENST00000627371 ANKMY2Q8IV38 441 aa19.91■□□□□ 0.78
PTCD3-220ENST00000627371 AVL9Q8NBF6 648 aa19.91■□□□□ 0.78
PTCD3-220ENST00000627371 FBXO36Q8NEA4 188 aa19.91■□□□□ 0.78
PTCD3-220ENST00000627371 LPGAT1Q92604 370 aa19.91■□□□□ 0.78
PTCD3-220ENST00000627371 CFAP36Q96G28 342 aa19.91■□□□□ 0.78
PTCD3-220ENST00000627371 CCDC3Q9BQI4 270 aa19.91■□□□□ 0.78
PTCD3-220ENST00000627371 FAM167BQ9BTA0 163 aa19.91■□□□□ 0.78
PTCD3-220ENST00000627371 P2RY12Q9H244 342 aa19.91■□□□□ 0.78
PTCD3-220ENST00000627371 COG4Q9H9E3 785 aa19.91■□□□□ 0.78
PTCD3-220ENST00000627371 SARS2Q9NP81 518 aaKnown RBP19.91■□□□□ 0.78
PTCD3-220ENST00000627371 INTS10Q9NVR2 710 aaKnown RBP19.91■□□□□ 0.78
PTCD3-220ENST00000627371 SCHIP1Q9P0W5 487 aaPredicted RBP19.91■□□□□ 0.78
PTCD3-220ENST00000627371 FAM8A1Q9UBU6 413 aa19.91■□□□□ 0.78
PTCD3-220ENST00000627371 DMGDHQ9UI17 866 aaKnown RBP19.91■□□□□ 0.78
PTCD3-220ENST00000627371 RABGEF1Q9UJ41 708 aa19.91■□□□□ 0.78
PTCD3-220ENST00000627371 GNPTGQ9UJJ9 305 aa19.91■□□□□ 0.78
PTCD3-220ENST00000627371 ACSL5Q9ULC5 683 aa19.91■□□□□ 0.78
PTCD3-220ENST00000627371 VPS9D1Q9Y2B5 631 aa19.91■□□□□ 0.78
PTCD3-220ENST00000627371 WDR37Q9Y2I8 494 aa19.91■□□□□ 0.78
PTCD3-220ENST00000627371 TRBV23OR9-2A0A075B6M9 112 aa19.9■□□□□ 0.78
PTCD3-220ENST00000627371 RHPN2P1A8MT19 583 aa19.9■□□□□ 0.78
PTCD3-220ENST00000627371 PPM1DO15297 605 aa19.9■□□□□ 0.78
PTCD3-220ENST00000627371 HALP42357 657 aa19.9■□□□□ 0.78
PTCD3-220ENST00000627371 ADARP55265 1226 aaKnown RBP19.9■□□□□ 0.78
PTCD3-220ENST00000627371 UBE2IP63279 158 aaKnown RBP19.9■□□□□ 0.78
PTCD3-220ENST00000627371 BIRC2Q13490 618 aa19.9■□□□□ 0.78
PTCD3-220ENST00000627371 HSP90AA5PQ58FG0 334 aa19.9■□□□□ 0.78
PTCD3-220ENST00000627371 CHCHD2P9Q5T1J5 151 aaPredicted RBP19.9■□□□□ 0.78
PTCD3-220ENST00000627371 DENND6AQ8IWF6 608 aa19.9■□□□□ 0.78
PTCD3-220ENST00000627371 CFAP206Q8IYR0 622 aa19.9■□□□□ 0.78
PTCD3-220ENST00000627371 ZBED8Q8IZ13 594 aa19.9■□□□□ 0.78
PTCD3-220ENST00000627371 UNC5BQ8IZJ1 945 aa19.9■□□□□ 0.78
PTCD3-220ENST00000627371 LILRA3Q8N6C8 439 aaPredicted RBP19.9■□□□□ 0.78
PTCD3-220ENST00000627371 CERS2Q96G23 380 aa19.9■□□□□ 0.78
PTCD3-220ENST00000627371 TSSK1BQ9BXA7 367 aa19.9■□□□□ 0.78
PTCD3-220ENST00000627371 FOXP3Q9BZS1 431 aa19.9■□□□□ 0.78
PTCD3-220ENST00000627371 STN1Q9H668 368 aaKnown RBP19.9■□□□□ 0.78
PTCD3-220ENST00000627371 FAM114A2Q9NRY5 505 aa19.9■□□□□ 0.78
PTCD3-220ENST00000627371 CPNE7Q9UBL6 633 aa19.9■□□□□ 0.78
PTCD3-220ENST00000627371 UBA6A0AVT1 1052 aaPredicted RBP19.89■□□□□ 0.77
PTCD3-220ENST00000627371 OPA1O60313 960 aa19.89■□□□□ 0.77
PTCD3-220ENST00000627371 XRCC1P18887 633 aaPredicted RBP19.89■□□□□ 0.77
PTCD3-220ENST00000627371 SLC1A2P43004 574 aa19.89■□□□□ 0.77
PTCD3-220ENST00000627371 KNTC1P50748 2209 aa19.89■□□□□ 0.77
PTCD3-220ENST00000627371 EIF3BP55884 814 aaKnown RBP19.89■□□□□ 0.77
PTCD3-220ENST00000627371 INSM1Q01101 510 aaPredicted RBP19.89■□□□□ 0.77
PTCD3-220ENST00000627371 HHEXQ03014 270 aa19.89■□□□□ 0.77
PTCD3-220ENST00000627371 FOXC1Q12948 553 aa19.89■□□□□ 0.77
PTCD3-220ENST00000627371 FRG1Q14331 258 aaKnown RBP19.89■□□□□ 0.77
PTCD3-220ENST00000627371 CLCA4Q14CN2 919 aa19.89■□□□□ 0.77
PTCD3-220ENST00000627371 DNTTIP2Q5QJE6 756 aaKnown RBP19.89■□□□□ 0.77
PTCD3-220ENST00000627371 GABPB2Q8TAK5 448 aaPredicted RBP19.89■□□□□ 0.77
PTCD3-220ENST00000627371 ELMO1Q92556 727 aa19.89■□□□□ 0.77
PTCD3-220ENST00000627371 FAM129AQ9BZQ8 928 aa19.89■□□□□ 0.77
PTCD3-220ENST00000627371 EPB41L5Q9HCM4 733 aa19.89■□□□□ 0.77
PTCD3-220ENST00000627371 SAYSD1Q9NPB0 183 aa19.89■□□□□ 0.77
PTCD3-220ENST00000627371 IARS2Q9NSE4 1012 aaKnown RBP19.89■□□□□ 0.77
PTCD3-220ENST00000627371 ZDHHC18Q9NUE0 388 aa19.89■□□□□ 0.77
PTCD3-220ENST00000627371 ZNF624Q9P2J8 865 aaPredicted RBP19.89■□□□□ 0.77
PTCD3-220ENST00000627371 PSMD13Q9UNM6 376 aa19.89■□□□□ 0.77
PTCD3-220ENST00000627371 PCDHB1Q9Y5F3 818 aa19.89■□□□□ 0.77
PTCD3-220ENST00000627371 OR52A4PA6NMU1 304 aa19.88■□□□□ 0.77
PTCD3-220ENST00000627371 LIN7AO14910 233 aaPredicted RBP19.88■□□□□ 0.77
PTCD3-220ENST00000627371 S1PR4O95977 384 aa19.88■□□□□ 0.77
PTCD3-220ENST00000627371 SLC35G4P0C7Q5 338 aa19.88■□□□□ 0.77
PTCD3-220ENST00000627371 ERVK-10P10266 1014 aa19.88■□□□□ 0.77
PTCD3-220ENST00000627371 SLC19A1P41440 591 aa19.88■□□□□ 0.77
PTCD3-220ENST00000627371 GPR3P46089 330 aa19.88■□□□□ 0.77
PTCD3-220ENST00000627371 RPA4Q13156 261 aa19.88■□□□□ 0.77
PTCD3-220ENST00000627371 CTBP1Q13363 440 aa19.88■□□□□ 0.77
PTCD3-220ENST00000627371 CTSL3PQ5NE16 218 aa19.88■□□□□ 0.77
PTCD3-220ENST00000627371 PTRHD1Q6GMV3 140 aaKnown RBP19.88■□□□□ 0.77
PTCD3-220ENST00000627371 SPRED1Q7Z699 444 aa19.88■□□□□ 0.77
PTCD3-220ENST00000627371 CNTN4Q8IWV2 1026 aa19.88■□□□□ 0.77
PTCD3-220ENST00000627371 CHCHD4Q8N4Q1 142 aa19.88■□□□□ 0.77
PTCD3-220ENST00000627371 WDR48Q8TAF3 677 aa19.88■□□□□ 0.77
PTCD3-220ENST00000627371 LKAAEAR1Q8TD35 194 aa19.88■□□□□ 0.77
PTCD3-220ENST00000627371 PYROXD1Q8WU10 500 aa19.88■□□□□ 0.77
PTCD3-220ENST00000627371 BIRC8Q96P09 236 aa19.88■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms