RNA–Protein interactions for RNA: ENST00000626948.2

SOX2-OT-241, SOX2 overlapping transcript, humanhuman

TSL 5

Gene SOX2-OT, Length 836 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-241ENST00000626948 CROTQ9UKG9 612 aa13.23□□□□□ -0.29
SOX2-OT-241ENST00000626948 TRHDEQ9UKU6 1024 aa13.23□□□□□ -0.29
SOX2-OT-241ENST00000626948 PCDHA3Q9Y5H8 950 aa13.23□□□□□ -0.29
SOX2-OT-241ENST00000626948 HEMK1Q9Y5R4 338 aaPredicted RBP13.23□□□□□ -0.29
SOX2-OT-241ENST00000626948 PTPN13Q12923 2485 aa13.23□□□□□ -0.29
SOX2-OT-241ENST00000626948 SPTBP11277 2137 aa13.22□□□□□ -0.29
SOX2-OT-241ENST00000626948 NBASA2RRP1 2371 aa13.22□□□□□ -0.29
SOX2-OT-241ENST00000626948 PJA2O43164 708 aa13.22□□□□□ -0.29
SOX2-OT-241ENST00000626948 RASSF9O75901 435 aa13.22□□□□□ -0.29
SOX2-OT-241ENST00000626948 NDUFA10O95299 355 aa13.22□□□□□ -0.29
SOX2-OT-241ENST00000626948 PRAMEF1O95521 474 aa13.22□□□□□ -0.29
SOX2-OT-241ENST00000626948 PRSS56P0CW18 603 aa13.22□□□□□ -0.29
SOX2-OT-241ENST00000626948 PYGMP11217 842 aa13.22□□□□□ -0.29
SOX2-OT-241ENST00000626948 MTHFD1P11586 935 aaKnown RBP13.22□□□□□ -0.29
SOX2-OT-241ENST00000626948 SFTPCP11686 197 aa13.22□□□□□ -0.29
SOX2-OT-241ENST00000626948 NR1D1P20393 614 aa13.22□□□□□ -0.29
SOX2-OT-241ENST00000626948 PBLDP30039 288 aaPredicted RBP13.22□□□□□ -0.29
SOX2-OT-241ENST00000626948 DLSTP36957 453 aa13.22□□□□□ -0.29
SOX2-OT-241ENST00000626948 CCR10P46092 362 aa13.22□□□□□ -0.29
SOX2-OT-241ENST00000626948 CDKN1CP49918 316 aaPredicted RBP13.22□□□□□ -0.29
SOX2-OT-241ENST00000626948 TLE1Q04724 770 aa13.22□□□□□ -0.29
SOX2-OT-241ENST00000626948 LAMB3Q13751 1172 aa13.22□□□□□ -0.29
SOX2-OT-241ENST00000626948 SPARCL1Q14515 664 aa13.22□□□□□ -0.29
SOX2-OT-241ENST00000626948 ANKRD20A2Q5SQ80 823 aa13.22□□□□□ -0.29
SOX2-OT-241ENST00000626948 ANKRD20A1Q5TYW2 823 aa13.22□□□□□ -0.29
SOX2-OT-241ENST00000626948 ANKRD20A3Q5VUR7 823 aa13.22□□□□□ -0.29
SOX2-OT-241ENST00000626948 PWWP2BQ6NUJ5 590 aa13.22□□□□□ -0.29
SOX2-OT-241ENST00000626948 C16orf46Q6P387 395 aa13.22□□□□□ -0.29
SOX2-OT-241ENST00000626948 FBXO38Q6PIJ6 1188 aa13.22□□□□□ -0.29
SOX2-OT-241ENST00000626948 C6orf15Q6UXA7 325 aaPredicted RBP13.22□□□□□ -0.29
SOX2-OT-241ENST00000626948 RBM12BQ8IXT5 1001 aaKnown RBP13.22□□□□□ -0.29
SOX2-OT-241ENST00000626948 CCDC170Q8IYT3 715 aa13.22□□□□□ -0.29
SOX2-OT-241ENST00000626948 ESX1Q8N693 406 aa13.22□□□□□ -0.29
SOX2-OT-241ENST00000626948 LRRC57Q8N9N7 239 aa13.22□□□□□ -0.29
SOX2-OT-241ENST00000626948 CCDC110Q8TBZ0 833 aa13.22□□□□□ -0.29
SOX2-OT-241ENST00000626948 ABHD17AQ96GS6 310 aa13.22□□□□□ -0.29
SOX2-OT-241ENST00000626948 RBM41Q96IZ5 413 aaKnown RBP13.22□□□□□ -0.29
SOX2-OT-241ENST00000626948 RMDN2Q96LZ7 410 aa13.22□□□□□ -0.29
SOX2-OT-241ENST00000626948 TRIM5Q9C035 493 aa13.22□□□□□ -0.29
SOX2-OT-241ENST00000626948 WWP1Q9H0M0 922 aa13.22□□□□□ -0.29
SOX2-OT-241ENST00000626948 FAM96AQ9H5X1 160 aa13.22□□□□□ -0.29
SOX2-OT-241ENST00000626948 TUBD1Q9UJT1 453 aa13.22□□□□□ -0.29
SOX2-OT-241ENST00000626948 KCNMB2Q9Y691 235 aa13.22□□□□□ -0.29
SOX2-OT-241ENST00000626948 DNMT3AQ9Y6K1 912 aaPredicted RBP13.22□□□□□ -0.29
SOX2-OT-241ENST00000626948 PCSK5Q92824 1860 aa13.22□□□□□ -0.29
SOX2-OT-241ENST00000626948 H7C0C1 242 aa13.21□□□□□ -0.29
SOX2-OT-241ENST00000626948 STX7O15400 261 aaKnown RBP13.21□□□□□ -0.29
SOX2-OT-241ENST00000626948 LDB2O43679 373 aa13.21□□□□□ -0.29
SOX2-OT-241ENST00000626948 KCNJ13O60928 360 aa13.21□□□□□ -0.29
SOX2-OT-241ENST00000626948 SRP72O76094 671 aaKnown RBP13.21□□□□□ -0.29
SOX2-OT-241ENST00000626948 EBLN1P0CF75 366 aa13.21□□□□□ -0.29
SOX2-OT-241ENST00000626948 RBP3P10745 1247 aa13.21□□□□□ -0.29
SOX2-OT-241ENST00000626948 LPOP22079 712 aaPredicted RBP13.21□□□□□ -0.29
SOX2-OT-241ENST00000626948 PTPN7P35236 360 aa13.21□□□□□ -0.29
SOX2-OT-241ENST00000626948 ATP5OP48047 213 aa13.21□□□□□ -0.29
SOX2-OT-241ENST00000626948 ZNF140P52738 457 aaPredicted RBP13.21□□□□□ -0.29
SOX2-OT-241ENST00000626948 ITGA9Q13797 1035 aa13.21□□□□□ -0.29
SOX2-OT-241ENST00000626948 GTF2H3Q13889 308 aa13.21□□□□□ -0.29
SOX2-OT-241ENST00000626948 IL11RAQ14626 422 aa13.21□□□□□ -0.29
SOX2-OT-241ENST00000626948 TAF1AQ15573 450 aaPredicted RBP13.21□□□□□ -0.29
SOX2-OT-241ENST00000626948 CRTC2Q53ET0 693 aaPredicted RBP13.21□□□□□ -0.29
SOX2-OT-241ENST00000626948 ZDHHC20Q5W0Z9 365 aa13.21□□□□□ -0.29
SOX2-OT-241ENST00000626948 FAM199XQ6PEV8 388 aaPredicted RBP13.21□□□□□ -0.29
SOX2-OT-241ENST00000626948 SLC38A9Q8NBW4 561 aa13.21□□□□□ -0.29
SOX2-OT-241ENST00000626948 ACRBPQ8NEB7 543 aa13.21□□□□□ -0.29
SOX2-OT-241ENST00000626948 KIAA1143Q96AT1 154 aaPredicted RBP13.21□□□□□ -0.29
SOX2-OT-241ENST00000626948 TTC25Q96NG3 672 aa13.21□□□□□ -0.29
SOX2-OT-241ENST00000626948 CATSPER2Q96P56 530 aa13.21□□□□□ -0.29
SOX2-OT-241ENST00000626948 OSBPL8Q9BZF1 889 aa13.21□□□□□ -0.29
SOX2-OT-241ENST00000626948 TRIT1Q9H3H1 467 aaKnown RBP13.21□□□□□ -0.29
SOX2-OT-241ENST00000626948 ASB8Q9H765 288 aa13.21□□□□□ -0.29
SOX2-OT-241ENST00000626948 IMP3Q9NV31 184 aaKnown RBP13.21□□□□□ -0.29
SOX2-OT-241ENST00000626948 FAM8A1Q9UBU6 413 aa13.21□□□□□ -0.29
SOX2-OT-241ENST00000626948 PKP3Q9Y446 797 aa13.21□□□□□ -0.29
SOX2-OT-241ENST00000626948 EPN1Q9Y6I3 576 aaPredicted RBP13.21□□□□□ -0.29
SOX2-OT-241ENST00000626948 TNRC6AQ8NDV7 1962 aaKnown RBP13.2□□□□□ -0.3
SOX2-OT-241ENST00000626948 MED13Q9UHV7 2174 aa13.2□□□□□ -0.3
SOX2-OT-241ENST00000626948 GRID2IPA4D2P6 1211 aa13.2□□□□□ -0.3
SOX2-OT-241ENST00000626948 OR5K3A6NET4 321 aa13.2□□□□□ -0.3
SOX2-OT-241ENST00000626948 MGAT4DA6NG13 374 aa13.2□□□□□ -0.3
SOX2-OT-241ENST00000626948 DDX3YO15523 660 aaKnown RBP13.2□□□□□ -0.3
SOX2-OT-241ENST00000626948 PDGFAP04085 211 aa13.2□□□□□ -0.3
SOX2-OT-241ENST00000626948 VCLP18206 1134 aa13.2□□□□□ -0.3
SOX2-OT-241ENST00000626948 TCN2P20062 427 aa13.2□□□□□ -0.3
SOX2-OT-241ENST00000626948 CTNNA2P26232 953 aa13.2□□□□□ -0.3
SOX2-OT-241ENST00000626948 ARCN1P48444 511 aaKnown RBP13.2□□□□□ -0.3
SOX2-OT-241ENST00000626948 ZNF75DP51815 510 aa13.2□□□□□ -0.3
SOX2-OT-241ENST00000626948 KPNA2P52292 529 aaKnown RBP13.2□□□□□ -0.3
SOX2-OT-241ENST00000626948 GEMP55040 296 aa13.2□□□□□ -0.3
SOX2-OT-241ENST00000626948 EIF3EP60228 445 aaKnown RBP13.2□□□□□ -0.3
SOX2-OT-241ENST00000626948 COPS2P61201 443 aa13.2□□□□□ -0.3
SOX2-OT-241ENST00000626948 ERV3-1Q14264 604 aa13.2□□□□□ -0.3
SOX2-OT-241ENST00000626948 IGFBP7Q16270 282 aa13.2□□□□□ -0.3
SOX2-OT-241ENST00000626948 LARP7Q4G0J3 582 aaKnown RBP eCLIP13.2□□□□□ -0.36e-12■□□□□ 8.2
SOX2-OT-241ENST00000626948 BCL7AQ4VC05 210 aa13.2□□□□□ -0.3
SOX2-OT-241ENST00000626948 PRAMEF17Q5VTA0 474 aa13.2□□□□□ -0.3
SOX2-OT-241ENST00000626948 KCTD11Q693B1 232 aa13.2□□□□□ -0.3
SOX2-OT-241ENST00000626948 CAPRIN2Q6IMN6 1127 aaKnown RBP13.2□□□□□ -0.3
SOX2-OT-241ENST00000626948 LCN10Q6JVE6 187 aa13.2□□□□□ -0.3
SOX2-OT-241ENST00000626948 TMEM139Q8IV31 216 aa13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms