RNA–Protein interactions for RNA: ENST00000625716.2

TCF4-249, Transcript of transcription factor 4, humanhuman

TSL 1 (best)

Gene TCF4, Length 359 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-249ENST00000625716 OR5K4A6NMS3 321 aa6.31□□□□□ -1.4
TCF4-249ENST00000625716 D6RAR5 112 aa6.31□□□□□ -1.4
TCF4-249ENST00000625716 NTN3O00634 580 aaPredicted RBP6.31□□□□□ -1.4
TCF4-249ENST00000625716 KMOO15229 486 aa6.31□□□□□ -1.4
TCF4-249ENST00000625716 PSMD3O43242 534 aa6.31□□□□□ -1.4
TCF4-249ENST00000625716 VEGFDO43915 354 aa6.31□□□□□ -1.4
TCF4-249ENST00000625716 NUAK1O60285 661 aa6.31□□□□□ -1.4
TCF4-249ENST00000625716 DNAJC6O75061 913 aa6.31□□□□□ -1.4
TCF4-249ENST00000625716 CDK14O94921 469 aa6.31□□□□□ -1.4
TCF4-249ENST00000625716 CPNE6O95741 557 aa6.31□□□□□ -1.4
TCF4-249ENST00000625716 GAS8O95995 478 aa6.31□□□□□ -1.4
TCF4-249ENST00000625716 B3GALT4O96024 378 aa6.31□□□□□ -1.4
TCF4-249ENST00000625716 AGTP01019 485 aa6.31□□□□□ -1.4
TCF4-249ENST00000625716 CAPNS1P04632 268 aa6.31□□□□□ -1.4
TCF4-249ENST00000625716 JMJD7P0C870 316 aa6.31□□□□□ -1.4
TCF4-249ENST00000625716 ZNF8P17098 575 aaPredicted RBP6.31□□□□□ -1.4
TCF4-249ENST00000625716 BPIP17213 487 aa6.31□□□□□ -1.4
TCF4-249ENST00000625716 LPOP22079 712 aaPredicted RBP6.31□□□□□ -1.4
TCF4-249ENST00000625716 PSMB4P28070 264 aa6.31□□□□□ -1.4
TCF4-249ENST00000625716 ABCG1P45844 678 aa6.31□□□□□ -1.4
TCF4-249ENST00000625716 GPR3P46089 330 aa6.31□□□□□ -1.4
TCF4-249ENST00000625716 LMAN1P49257 510 aa6.31□□□□□ -1.4
TCF4-249ENST00000625716 MAZP56270 477 aaKnown RBP6.31□□□□□ -1.4
TCF4-249ENST00000625716 OR1D5P58170 312 aa6.31□□□□□ -1.4
TCF4-249ENST00000625716 ERVPABLB-1P60509 514 aa6.31□□□□□ -1.4
TCF4-249ENST00000625716 EIF3IQ13347 325 aaKnown RBP6.31□□□□□ -1.4
TCF4-249ENST00000625716 ITGA9Q13797 1035 aa6.31□□□□□ -1.4
TCF4-249ENST00000625716 RPS6KA1Q15418 735 aa6.31□□□□□ -1.4
TCF4-249ENST00000625716 TAF1AQ15573 450 aaPredicted RBP6.31□□□□□ -1.4
TCF4-249ENST00000625716 INSCQ1MX18 579 aa6.31□□□□□ -1.4
TCF4-249ENST00000625716 PARP6Q2NL67 630 aa6.31□□□□□ -1.4
TCF4-249ENST00000625716 P3H1Q32P28 736 aa6.31□□□□□ -1.4
TCF4-249ENST00000625716 TBC1D25Q3MII6 688 aa6.31□□□□□ -1.4
TCF4-249ENST00000625716 MAP9Q49MG5 647 aa6.31□□□□□ -1.4
TCF4-249ENST00000625716 ZNF648Q5T619 568 aaPredicted RBP6.31□□□□□ -1.4
TCF4-249ENST00000625716 PHF19Q5T6S3 580 aa6.31□□□□□ -1.4
TCF4-249ENST00000625716 BROXQ5VW32 411 aa6.31□□□□□ -1.4
TCF4-249ENST00000625716 CRTC3Q6UUV7 619 aa6.31□□□□□ -1.4
TCF4-249ENST00000625716 FAM151BQ6UXP7 276 aa6.31□□□□□ -1.4
TCF4-249ENST00000625716 SPRED1Q7Z699 444 aa6.31□□□□□ -1.4
TCF4-249ENST00000625716 SLC9B2Q86UD5 537 aa6.31□□□□□ -1.4
TCF4-249ENST00000625716 LRRTM4Q86VH4 590 aa6.31□□□□□ -1.4
TCF4-249ENST00000625716 JAMLQ86YT9 394 aa6.31□□□□□ -1.4
TCF4-249ENST00000625716 LRRC8AQ8IWT6 810 aa6.31□□□□□ -1.4
TCF4-249ENST00000625716 FBXO39Q8N4B4 442 aa6.31□□□□□ -1.4
TCF4-249ENST00000625716 FAM71DQ8N9W8 422 aa6.31□□□□□ -1.4
TCF4-249ENST00000625716 AVL9Q8NBF6 648 aa6.31□□□□□ -1.4
TCF4-249ENST00000625716 ZNF248Q8NDW4 579 aa6.31□□□□□ -1.4
TCF4-249ENST00000625716 OR10G6Q8NH81 332 aa6.31□□□□□ -1.4
TCF4-249ENST00000625716 CCDC110Q8TBZ0 833 aa6.31□□□□□ -1.4
TCF4-249ENST00000625716 ANP32BQ92688 251 aaKnown RBP6.31□□□□□ -1.4
TCF4-249ENST00000625716 SH3KBP1Q96B97 665 aa6.31□□□□□ -1.4
TCF4-249ENST00000625716 EID2BQ96D98 161 aa6.31□□□□□ -1.4
TCF4-249ENST00000625716 HES6Q96HZ4 224 aa6.31□□□□□ -1.4
TCF4-249ENST00000625716 SPATA13Q96N96 652 aa6.31□□□□□ -1.4
TCF4-249ENST00000625716 SLC38A3Q99624 504 aa6.31□□□□□ -1.4
TCF4-249ENST00000625716 DPYSL5Q9BPU6 564 aa6.31□□□□□ -1.4
TCF4-249ENST00000625716 HERPUD2Q9BSE4 406 aa6.31□□□□□ -1.4
TCF4-249ENST00000625716 LDHAL6BQ9BYZ2 381 aaPredicted RBP6.31□□□□□ -1.4
TCF4-249ENST00000625716 FRMD8P1Q9BZ68 369 aaPredicted RBP6.31□□□□□ -1.4
TCF4-249ENST00000625716 SEMA6CQ9H3T2 930 aa6.31□□□□□ -1.4
TCF4-249ENST00000625716 OSGEPL1Q9H4B0 414 aa6.31□□□□□ -1.4
TCF4-249ENST00000625716 ACSS3Q9H6R3 686 aa6.31□□□□□ -1.4
TCF4-249ENST00000625716 ARFGAP3Q9NP61 516 aa6.31□□□□□ -1.4
TCF4-249ENST00000625716 LZTFL1Q9NQ48 299 aa6.31□□□□□ -1.4
TCF4-249ENST00000625716 C1GALT1Q9NS00 363 aa6.31□□□□□ -1.4
TCF4-249ENST00000625716 KLC4Q9NSK0 619 aa6.31□□□□□ -1.4
TCF4-249ENST00000625716 ATXN10Q9UBB4 475 aa6.31□□□□□ -1.4
TCF4-249ENST00000625716 NFKBIL1Q9UBC1 381 aaPredicted RBP6.31□□□□□ -1.4
TCF4-249ENST00000625716 CNOT6Q9ULM6 557 aaKnown RBP6.31□□□□□ -1.4
TCF4-249ENST00000625716 KCNK6Q9Y257 313 aa6.31□□□□□ -1.4
TCF4-249ENST00000625716 ENTPD2Q9Y5L3 495 aa6.31□□□□□ -1.4
TCF4-249ENST00000625716 TDRD6O60522 2096 aaKnown RBP6.3□□□□□ -1.4
TCF4-249ENST00000625716 PTPRBP23467 1997 aa6.3□□□□□ -1.4
TCF4-249ENST00000625716 KIR2DS5A0A0G2JLQ3 304 aa6.3□□□□□ -1.4
TCF4-249ENST00000625716 A0A0G2JNG1 304 aa6.3□□□□□ -1.4
TCF4-249ENST00000625716 A0A0U1RQJ8 604 aa6.3□□□□□ -1.4
TCF4-249ENST00000625716 A0A1W2PQM1 296 aa6.3□□□□□ -1.4
TCF4-249ENST00000625716 C5orf60A6NFR6 353 aa6.3□□□□□ -1.4
TCF4-249ENST00000625716 PDZK1P1A8MUH7 402 aa6.3□□□□□ -1.4
TCF4-249ENST00000625716 E7EVH7 732 aa6.3□□□□□ -1.4
TCF4-249ENST00000625716 KIR2DS3K7RE56 304 aa6.3□□□□□ -1.4
TCF4-249ENST00000625716 PLD2O14939 933 aa6.3□□□□□ -1.4
TCF4-249ENST00000625716 AURKAO14965 403 aa6.3□□□□□ -1.4
TCF4-249ENST00000625716 PPM1DO15297 605 aa6.3□□□□□ -1.4
TCF4-249ENST00000625716 BUD23O43709 281 aaKnown RBP6.3□□□□□ -1.4
TCF4-249ENST00000625716 KCNJ13O60928 360 aa6.3□□□□□ -1.4
TCF4-249ENST00000625716 TNFSF15O95150 251 aa6.3□□□□□ -1.4
TCF4-249ENST00000625716 VIPP01282 170 aa6.3□□□□□ -1.4
TCF4-249ENST00000625716 RALBP11234 206 aa6.3□□□□□ -1.4
TCF4-249ENST00000625716 ZNF7P17097 686 aaPredicted RBP6.3□□□□□ -1.4
TCF4-249ENST00000625716 MSH3P20585 1137 aa6.3□□□□□ -1.4
TCF4-249ENST00000625716 IDSP22304 550 aa6.3□□□□□ -1.4
TCF4-249ENST00000625716 AKT1P31749 480 aa6.3□□□□□ -1.4
TCF4-249ENST00000625716 STIP1P31948 543 aaKnown RBP6.3□□□□□ -1.4
TCF4-249ENST00000625716 HADHAP40939 763 aa6.3□□□□□ -1.4
TCF4-249ENST00000625716 EIF2S3P41091 472 aaKnown RBP6.3□□□□□ -1.4
TCF4-249ENST00000625716 B4GALNT1Q00973 533 aa6.3□□□□□ -1.4
TCF4-249ENST00000625716 HHEXQ03014 270 aa6.3□□□□□ -1.4
TCF4-249ENST00000625716 CCDC173Q0VFZ6 552 aa6.3□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 250.8 ms