RNA–Protein interactions for RNA: ENST00000621856.1

SPAST-204, Transcript of spastin, humanhuman

TSL 1 (best) BASIC

Gene SPAST, Length 1,715 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPAST-204ENST00000621856 EIF2B4Q9UI10 523 aaKnown RBP21.1■□□□□ 0.97
SPAST-204ENST00000621856 CFAP73A6NFT4 308 aa21.09■□□□□ 0.97
SPAST-204ENST00000621856 FFAR2O15552 330 aa21.09■□□□□ 0.97
SPAST-204ENST00000621856 CDK14O94921 469 aa21.09■□□□□ 0.97
SPAST-204ENST00000621856 GUCA1CO95843 209 aa21.09■□□□□ 0.97
SPAST-204ENST00000621856 JUNP05412 331 aaKnown RBP21.09■□□□□ 0.97
SPAST-204ENST00000621856 ENO1P06733 434 aaKnown RBP21.09■□□□□ 0.97
SPAST-204ENST00000621856 ESRRAP11474 423 aaPredicted RBP21.09■□□□□ 0.97
SPAST-204ENST00000621856 CREB5Q02930 508 aa21.09■□□□□ 0.97
SPAST-204ENST00000621856 LCP2Q13094 533 aa21.09■□□□□ 0.97
SPAST-204ENST00000621856 PPP1R3AQ16821 1122 aa21.09■□□□□ 0.97
SPAST-204ENST00000621856 METTL21CQ5VZV1 264 aa21.09■□□□□ 0.97
SPAST-204ENST00000621856 RALGPS2Q86X27 583 aaPredicted RBP21.09■□□□□ 0.97
SPAST-204ENST00000621856 RASGEF1AQ8N9B8 481 aa21.09■□□□□ 0.97
SPAST-204ENST00000621856 ZNF483Q8TF39 744 aaPredicted RBP21.09■□□□□ 0.97
SPAST-204ENST00000621856 SKA2Q8WVK7 121 aaPredicted RBP21.09■□□□□ 0.97
SPAST-204ENST00000621856 STON2Q8WXE9 905 aa21.09■□□□□ 0.97
SPAST-204ENST00000621856 PTCD3Q96EY7 689 aaKnown RBP21.09■□□□□ 0.97
SPAST-204ENST00000621856 EGFL8Q99944 293 aa21.09■□□□□ 0.97
SPAST-204ENST00000621856 CCDC28BQ9BUN5 200 aa21.09■□□□□ 0.97
SPAST-204ENST00000621856 C1QTNF3Q9BXJ4 246 aa21.09■□□□□ 0.97
SPAST-204ENST00000621856 SEMA4BQ9NPR2 832 aaPredicted RBP21.09■□□□□ 0.97
SPAST-204ENST00000621856 HEBP1Q9NRV9 189 aa21.09■□□□□ 0.97
SPAST-204ENST00000621856 LIMD1Q9UGP4 676 aa21.09■□□□□ 0.97
SPAST-204ENST00000621856 PCTPQ9UKL6 214 aa21.09■□□□□ 0.97
SPAST-204ENST00000621856 COL4A2P08572 1712 aa21.09■□□□□ 0.97
SPAST-204ENST00000621856 CAPN14A8MX76 684 aa21.09■□□□□ 0.97
SPAST-204ENST00000621856 SGTAO43765 313 aa21.09■□□□□ 0.97
SPAST-204ENST00000621856 VCLP18206 1134 aa21.09■□□□□ 0.97
SPAST-204ENST00000621856 SH3BP2P78314 561 aa21.09■□□□□ 0.97
SPAST-204ENST00000621856 BTKQ06187 659 aa21.09■□□□□ 0.97
SPAST-204ENST00000621856 TMEM115Q12893 351 aaPredicted RBP21.09■□□□□ 0.97
SPAST-204ENST00000621856 RBBP7Q16576 425 aa21.09■□□□□ 0.97
SPAST-204ENST00000621856 LSM12Q3MHD2 195 aaKnown RBP21.09■□□□□ 0.97
SPAST-204ENST00000621856 CLEC6AQ6EIG7 209 aa21.09■□□□□ 0.97
SPAST-204ENST00000621856 ASRGL1Q7L266 308 aa21.09■□□□□ 0.97
SPAST-204ENST00000621856 TREML1Q86YW5 311 aa21.09■□□□□ 0.97
SPAST-204ENST00000621856 PELI3Q8N2H9 469 aa21.09■□□□□ 0.97
SPAST-204ENST00000621856 KIF2BQ8N4N8 673 aa21.09■□□□□ 0.97
SPAST-204ENST00000621856 BEND7Q8N7W2 519 aaPredicted RBP21.09■□□□□ 0.97
SPAST-204ENST00000621856 OR2T3Q8NH03 318 aa21.09■□□□□ 0.97
SPAST-204ENST00000621856 ESAMQ96AP7 390 aa21.09■□□□□ 0.97
SPAST-204ENST00000621856 C8orf33Q9H7E9 229 aaPredicted RBP21.09■□□□□ 0.97
SPAST-204ENST00000621856 TRPV5Q9NQA5 729 aa21.09■□□□□ 0.97
SPAST-204ENST00000621856 PRR5-ARHGAP8B1AHC4 643 aa21.08■□□□□ 0.97
SPAST-204ENST00000621856 K7ESM1 405 aa21.08■□□□□ 0.97
SPAST-204ENST00000621856 PPP6CO00743 305 aa21.08■□□□□ 0.97
SPAST-204ENST00000621856 PCDH8O95206 1070 aa21.08■□□□□ 0.97
SPAST-204ENST00000621856 SOD1P00441 154 aa21.08■□□□□ 0.97
SPAST-204ENST00000621856 MPC1LP0DKB6 136 aa21.08■□□□□ 0.97
SPAST-204ENST00000621856 CALB2P22676 271 aa21.08■□□□□ 0.97
SPAST-204ENST00000621856 MAGEA9P43362 315 aa21.08■□□□□ 0.97
SPAST-204ENST00000621856 RPS14P62263 151 aaKnown RBP21.08■□□□□ 0.97
SPAST-204ENST00000621856 ARHGAP8P85298 464 aa21.08■□□□□ 0.97
SPAST-204ENST00000621856 DPTQ07507 201 aa21.08■□□□□ 0.97
SPAST-204ENST00000621856 SMAD4Q13485 552 aaKnown RBP21.08■□□□□ 0.97
SPAST-204ENST00000621856 GBX1Q14549 363 aa21.08■□□□□ 0.97
SPAST-204ENST00000621856 AGBL4Q5VU57 503 aa21.08■□□□□ 0.97
SPAST-204ENST00000621856 KIAA1211LQ6NV74 962 aa21.08■□□□□ 0.97
SPAST-204ENST00000621856 C10orf67Q8IYJ2 551 aa21.08■□□□□ 0.97
SPAST-204ENST00000621856 CLYBLQ8N0X4 340 aa21.08■□□□□ 0.97
SPAST-204ENST00000621856 PDPRQ8NCN5 879 aa21.08■□□□□ 0.97
SPAST-204ENST00000621856 GANCQ8TET4 914 aa21.08■□□□□ 0.97
SPAST-204ENST00000621856 HGH1Q9BTY7 390 aa21.08■□□□□ 0.97
SPAST-204ENST00000621856 ZCCHC2Q9C0B9 1178 aaKnown RBP21.08■□□□□ 0.97
SPAST-204ENST00000621856 KCNK12Q9HB15 430 aa21.08■□□□□ 0.97
SPAST-204ENST00000621856 FAM8A1Q9UBU6 413 aa21.08■□□□□ 0.97
SPAST-204ENST00000621856 LNPEPQ9UIQ6 1025 aa21.08■□□□□ 0.97
SPAST-204ENST00000621856 PRDM4Q9UKN5 801 aa21.08■□□□□ 0.97
SPAST-204ENST00000621856 CNOT6Q9ULM6 557 aaKnown RBP21.08■□□□□ 0.97
SPAST-204ENST00000621856 TNPO3Q9Y5L0 923 aaKnown RBP21.08■□□□□ 0.97
SPAST-204ENST00000621856 A0A1W2PP55 124 aa21.07■□□□□ 0.96
SPAST-204ENST00000621856 A0A1W2PPC1 479 aa21.07■□□□□ 0.96
SPAST-204ENST00000621856 SDHDO14521 159 aa21.07■□□□□ 0.96
SPAST-204ENST00000621856 MBTPS2O43462 519 aa21.07■□□□□ 0.96
SPAST-204ENST00000621856 TSPAN6O43657 245 aa21.07■□□□□ 0.96
SPAST-204ENST00000621856 AP1G1O43747 822 aa21.07■□□□□ 0.96
SPAST-204ENST00000621856 NUAK1O60285 661 aa21.07■□□□□ 0.96
SPAST-204ENST00000621856 ATG13O75143 517 aa21.07■□□□□ 0.96
SPAST-204ENST00000621856 CRCPO75575 148 aa21.07■□□□□ 0.96
SPAST-204ENST00000621856 KLF8O95600 359 aaPredicted RBP21.07■□□□□ 0.96
SPAST-204ENST00000621856 MLYCDO95822 493 aa21.07■□□□□ 0.96
SPAST-204ENST00000621856 NQO1P15559 274 aaKnown RBP21.07■□□□□ 0.96
SPAST-204ENST00000621856 CTSCP53634 463 aa21.07■□□□□ 0.96
SPAST-204ENST00000621856 GRSF1Q12849 480 aaKnown RBP eCLIP21.07■□□□□ 0.96
SPAST-204ENST00000621856 PHKG1Q16816 387 aa21.07■□□□□ 0.96
SPAST-204ENST00000621856 SYTL3Q4VX76 610 aa21.07■□□□□ 0.96
SPAST-204ENST00000621856 TMEM196Q5HYL7 178 aa21.07■□□□□ 0.96
SPAST-204ENST00000621856 TRIM74Q86UV6 250 aa21.07■□□□□ 0.96
SPAST-204ENST00000621856 SLC44A3Q8N4M1 653 aa21.07■□□□□ 0.96
SPAST-204ENST00000621856 OR56A4Q8NGH8 313 aa21.07■□□□□ 0.96
SPAST-204ENST00000621856 AGAP11Q8TF27 550 aa21.07■□□□□ 0.96
SPAST-204ENST00000621856 GABRG3Q99928 467 aa21.07■□□□□ 0.96
SPAST-204ENST00000621856 LRMDAQ9H2I8 198 aa21.07■□□□□ 0.96
SPAST-204ENST00000621856 AZIN1O14977 448 aa21.07■□□□□ 0.96
SPAST-204ENST00000621856 RNASEH2AO75792 299 aaKnown RBP21.07■□□□□ 0.96
SPAST-204ENST00000621856 DRD1P21728 446 aa21.07■□□□□ 0.96
SPAST-204ENST00000621856 PRLHRP49683 370 aa21.07■□□□□ 0.96
SPAST-204ENST00000621856 PCBP2Q15366 365 aaKnown RBP eCLIP21.07■□□□□ 0.96
SPAST-204ENST00000621856 SKIV2LQ15477 1246 aaKnown RBP21.07■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms