RNA–Protein interactions for RNA: ENST00000621676.4

VPS11-208, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS11, Length 3,313 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-208ENST00000621676 STON1Q9Y6Q2 735 aa10.37□□□□□ -0.75
VPS11-208ENST00000621676 SPAG17Q6Q759 2223 aa10.37□□□□□ -0.75
VPS11-208ENST00000621676 CAPN8A6NHC0 703 aa10.37□□□□□ -0.75
VPS11-208ENST00000621676 SOX1O00570 391 aaPredicted RBP10.37□□□□□ -0.75
VPS11-208ENST00000621676 SLC9A3R1O14745 358 aaPredicted RBP10.37□□□□□ -0.75
VPS11-208ENST00000621676 UNC5CO95185 931 aa10.37□□□□□ -0.75
VPS11-208ENST00000621676 KLF8O95600 359 aaPredicted RBP10.37□□□□□ -0.75
VPS11-208ENST00000621676 CAPN1P07384 714 aa10.37□□□□□ -0.75
VPS11-208ENST00000621676 HNRNPA1P09651 372 aaKnown RBP eCLIP10.37□□□□□ -0.75
VPS11-208ENST00000621676 C6P13671 934 aa10.37□□□□□ -0.75
VPS11-208ENST00000621676 NQO1P15559 274 aaKnown RBP10.37□□□□□ -0.75
VPS11-208ENST00000621676 SULT2A1Q06520 285 aa10.37□□□□□ -0.75
VPS11-208ENST00000621676 BNIP1Q12981 228 aa10.37□□□□□ -0.75
VPS11-208ENST00000621676 RFTN1Q14699 578 aaPredicted RBP10.37□□□□□ -0.75
VPS11-208ENST00000621676 TIFABQ6ZNK6 161 aa10.37□□□□□ -0.75
VPS11-208ENST00000621676 UBE2R2Q712K3 238 aaPredicted RBP10.37□□□□□ -0.75
VPS11-208ENST00000621676 GPR149Q86SP6 731 aa10.37□□□□□ -0.75
VPS11-208ENST00000621676 ANKRD46Q86W74 232 aa10.37□□□□□ -0.75
VPS11-208ENST00000621676 DOK4Q8TEW6 326 aa10.37□□□□□ -0.75
VPS11-208ENST00000621676 FRS2Q8WU20 508 aa10.37□□□□□ -0.75
VPS11-208ENST00000621676 PYDC1Q8WXC3 89 aa10.37□□□□□ -0.75
VPS11-208ENST00000621676 UTP4Q969X6 686 aaKnown RBP10.37□□□□□ -0.75
VPS11-208ENST00000621676 FAM83CQ9BQN1 747 aa10.37□□□□□ -0.75
VPS11-208ENST00000621676 IPPKQ9H8X2 491 aa10.37□□□□□ -0.75
VPS11-208ENST00000621676 PNMA8BQ9ULN7 279 aaPredicted RBP10.37□□□□□ -0.75
VPS11-208ENST00000621676 RNF11Q9Y3C5 154 aa10.37□□□□□ -0.75
VPS11-208ENST00000621676 PIAS3Q9Y6X2 628 aa10.37□□□□□ -0.75
VPS11-208ENST00000621676 ANKRD36A6QL64 1941 aa10.36□□□□□ -0.75
VPS11-208ENST00000621676 GRID2O43424 1007 aa10.36□□□□□ -0.75
VPS11-208ENST00000621676 FZD6O60353 706 aa10.36□□□□□ -0.75
VPS11-208ENST00000621676 ACP5P13686 325 aa10.36□□□□□ -0.75
VPS11-208ENST00000621676 LTBRP36941 435 aa10.36□□□□□ -0.75
VPS11-208ENST00000621676 GRIA3P42263 894 aa10.36□□□□□ -0.75
VPS11-208ENST00000621676 NAE1Q13564 534 aa10.36□□□□□ -0.75
VPS11-208ENST00000621676 ITIH4Q14624 930 aa10.36□□□□□ -0.75
VPS11-208ENST00000621676 C6orf10Q5SRN2 563 aa10.36□□□□□ -0.75
VPS11-208ENST00000621676 LIPIQ6XZB0 460 aa10.36□□□□□ -0.75
VPS11-208ENST00000621676 CLEC14AQ86T13 490 aa10.36□□□□□ -0.75
VPS11-208ENST00000621676 CPXM2Q8N436 756 aa10.36□□□□□ -0.75
VPS11-208ENST00000621676 SLC7A6OSQ96CW6 309 aaPredicted RBP10.36□□□□□ -0.75
VPS11-208ENST00000621676 GDF15Q99988 308 aa10.36□□□□□ -0.75
VPS11-208ENST00000621676 EBPLQ9BY08 206 aa10.36□□□□□ -0.75
VPS11-208ENST00000621676 CADM1Q9BY67 442 aaKnown RBP10.36□□□□□ -0.75
VPS11-208ENST00000621676 MIR1-1HGQ9H1L0 117 aa10.36□□□□□ -0.75
VPS11-208ENST00000621676 CCDC134Q9H6E4 229 aa10.36□□□□□ -0.75
VPS11-208ENST00000621676 MAGEE1Q9HCI5 957 aa10.36□□□□□ -0.75
VPS11-208ENST00000621676 SAR1AQ9NR31 198 aa10.36□□□□□ -0.75
VPS11-208ENST00000621676 KLC4Q9NSK0 619 aa10.36□□□□□ -0.75
VPS11-208ENST00000621676 STOX2Q9P2F5 926 aaPredicted RBP10.36□□□□□ -0.75
VPS11-208ENST00000621676 FETUBQ9UGM5 382 aa10.36□□□□□ -0.75
VPS11-208ENST00000621676 CDYLQ9Y232 598 aa10.36□□□□□ -0.75
VPS11-208ENST00000621676 ZNF510Q9Y2H8 683 aa10.36□□□□□ -0.75
VPS11-208ENST00000621676 OAS3Q9Y6K5 1087 aaKnown RBP10.36□□□□□ -0.75
VPS11-208ENST00000621676 DGKBQ9Y6T7 804 aa10.36□□□□□ -0.75
VPS11-208ENST00000621676 ARID1BQ8NFD5 2236 aaPredicted RBP10.36□□□□□ -0.75
VPS11-208ENST00000621676 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP10.36□□□□□ -0.75
VPS11-208ENST00000621676 OR52A4PA6NMU1 304 aa10.36□□□□□ -0.75
VPS11-208ENST00000621676 PDZK1P1A8MUH7 402 aa10.36□□□□□ -0.75
VPS11-208ENST00000621676 DNAJA2O60884 412 aa10.36□□□□□ -0.75
VPS11-208ENST00000621676 GSNP06396 782 aa10.36□□□□□ -0.75
VPS11-208ENST00000621676 RBP1P09455 135 aa10.36□□□□□ -0.75
VPS11-208ENST00000621676 POLR2LP62875 67 aaKnown RBP10.36□□□□□ -0.75
VPS11-208ENST00000621676 TMEM115Q12893 351 aaPredicted RBP10.36□□□□□ -0.75
VPS11-208ENST00000621676 UBXN2BQ14CS0 331 aa10.36□□□□□ -0.75
VPS11-208ENST00000621676 C5orf22Q49AR2 442 aa10.36□□□□□ -0.75
VPS11-208ENST00000621676 ZNF805Q5CZA5 627 aa10.36□□□□□ -0.75
VPS11-208ENST00000621676 C9orf64Q5T6V5 341 aa10.36□□□□□ -0.75
VPS11-208ENST00000621676 SNX20Q7Z614 316 aa10.36□□□□□ -0.75
VPS11-208ENST00000621676 TRIM42Q8IWZ5 723 aa10.36□□□□□ -0.75
VPS11-208ENST00000621676 RAVER1Q8IY67 606 aaKnown RBP10.36□□□□□ -0.75
VPS11-208ENST00000621676 RBFAQ8N0V3 343 aa10.36□□□□□ -0.75
VPS11-208ENST00000621676 RPLP0P6Q8NHW5 317 aa10.36□□□□□ -0.75
VPS11-208ENST00000621676 ACMSDQ8TDX5 336 aa10.36□□□□□ -0.75
VPS11-208ENST00000621676 SLC26A7Q8TE54 656 aa10.36□□□□□ -0.75
VPS11-208ENST00000621676 OR8D1Q8WZ84 308 aa10.36□□□□□ -0.75
VPS11-208ENST00000621676 ACTR8Q9H981 624 aa10.36□□□□□ -0.75
VPS11-208ENST00000621676 IMP3Q9NV31 184 aaKnown RBP10.36□□□□□ -0.75
VPS11-208ENST00000621676 NSMCE4AQ9NXX6 385 aa10.36□□□□□ -0.75
VPS11-208ENST00000621676 HCN2Q9UL51 889 aa10.36□□□□□ -0.75
VPS11-208ENST00000621676 VPS4AQ9UN37 437 aa10.36□□□□□ -0.75
VPS11-208ENST00000621676 LZTS1Q9Y250 596 aa10.36□□□□□ -0.75
VPS11-208ENST00000621676 GPSM3Q9Y4H4 160 aa10.36□□□□□ -0.75
VPS11-208ENST00000621676 DNAJC15Q9Y5T4 150 aa10.36□□□□□ -0.75
VPS11-208ENST00000621676 SCN2AQ99250 2005 aa10.36□□□□□ -0.75
VPS11-208ENST00000621676 LOC400499M0QZD8 3231 aa10.36□□□□□ -0.75
VPS11-208ENST00000621676 SPECC1L-ADORA2AF8WAN1 911 aa10.36□□□□□ -0.75
VPS11-208ENST00000621676 PFDN6O15212 129 aa10.36□□□□□ -0.75
VPS11-208ENST00000621676 HDAC3O15379 428 aa10.36□□□□□ -0.75
VPS11-208ENST00000621676 WDR47O94967 919 aa10.36□□□□□ -0.75
VPS11-208ENST00000621676 CISD3P0C7P0 127 aa10.36□□□□□ -0.75
VPS11-208ENST00000621676 FDXRP22570 491 aa10.36□□□□□ -0.75
VPS11-208ENST00000621676 C1orf61Q13536 156 aa10.36□□□□□ -0.75
VPS11-208ENST00000621676 NR6A1Q15406 480 aa10.36□□□□□ -0.75
VPS11-208ENST00000621676 C1orf146Q5VVC0 180 aa10.36□□□□□ -0.75
VPS11-208ENST00000621676 ANKS6Q68DC2 871 aa10.36□□□□□ -0.75
VPS11-208ENST00000621676 ANKRD26P1Q6NSI1 321 aa10.36□□□□□ -0.75
VPS11-208ENST00000621676 ERAP2Q6P179 960 aa10.36□□□□□ -0.75
VPS11-208ENST00000621676 FNDC5Q8NAU1 212 aa10.36□□□□□ -0.75
VPS11-208ENST00000621676 DNAJB14Q8TBM8 379 aa10.36□□□□□ -0.75
VPS11-208ENST00000621676 PRSS16Q9NQE7 514 aa10.36□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms