RNA–Protein interactions for RNA: ENST00000621104.4

CCDC144B-209, Transcript of coiled-coil domain containing 144B (pseudogene), humanhuman

TSL 2

Gene CCDC144B, Length 993 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144B-209ENST00000621104 ZNF644Q9H582 1327 aaPredicted RBP3.42□□□□□ -1.86
CCDC144B-209ENST00000621104 TEX13DA0A0J9YY54 714 aaPredicted RBP3.41□□□□□ -1.86
CCDC144B-209ENST00000621104 A0A1W2PR77 199 aa3.41□□□□□ -1.86
CCDC144B-209ENST00000621104 CLIC2O15247 247 aa3.41□□□□□ -1.86
CCDC144B-209ENST00000621104 NDUFS4O43181 175 aa3.41□□□□□ -1.86
CCDC144B-209ENST00000621104 BAIAP3O94812 1187 aa3.41□□□□□ -1.86
CCDC144B-209ENST00000621104 KRT19P08727 400 aa3.41□□□□□ -1.86
CCDC144B-209ENST00000621104 LIFP15018 202 aa3.41□□□□□ -1.86
CCDC144B-209ENST00000621104 GNB3P16520 340 aa3.41□□□□□ -1.86
CCDC144B-209ENST00000621104 GNAZP19086 355 aa3.41□□□□□ -1.86
CCDC144B-209ENST00000621104 CHST9Q7L1S5 443 aa3.41□□□□□ -1.86
CCDC144B-209ENST00000621104 RSRC2Q7L4I2 434 aaKnown RBP3.41□□□□□ -1.86
CCDC144B-209ENST00000621104 FASTKD5Q7L8L6 764 aaKnown RBP3.41□□□□□ -1.86
CCDC144B-209ENST00000621104 NOTCH2NLQ7Z3S9 236 aa3.41□□□□□ -1.86
CCDC144B-209ENST00000621104 WDTC1Q8N5D0 677 aa3.41□□□□□ -1.86
CCDC144B-209ENST00000621104 L3MBTL4Q8NA19 623 aa3.41□□□□□ -1.86
CCDC144B-209ENST00000621104 TEX19Q8NA77 164 aa3.41□□□□□ -1.86
CCDC144B-209ENST00000621104 ADAD2Q8NCV1 583 aaKnown RBP3.41□□□□□ -1.86
CCDC144B-209ENST00000621104 SEMA6AQ9H2E6 1030 aa3.41□□□□□ -1.86
CCDC144B-209ENST00000621104 BICC1Q9H694 974 aaKnown RBP3.41□□□□□ -1.86
CCDC144B-209ENST00000621104 DNAJB4Q9UDY4 337 aa3.41□□□□□ -1.86
CCDC144B-209ENST00000621104 FBXL17Q9UF56 701 aa3.41□□□□□ -1.86
CCDC144B-209ENST00000621104 AMACRQ9UHK6 382 aa3.41□□□□□ -1.86
CCDC144B-209ENST00000621104 ITIH6Q6UXX5 1313 aa3.41□□□□□ -1.86
CCDC144B-209ENST00000621104 CYSRT1A8MQ03 144 aa3.4□□□□□ -1.87
CCDC144B-209ENST00000621104 PLK4O00444 970 aa3.4□□□□□ -1.87
CCDC144B-209ENST00000621104 PSMD14O00487 310 aa3.4□□□□□ -1.87
CCDC144B-209ENST00000621104 TPPPO94811 219 aa3.4□□□□□ -1.87
CCDC144B-209ENST00000621104 CSPG5O95196 566 aa3.4□□□□□ -1.87
CCDC144B-209ENST00000621104 GCNT3O95395 438 aa3.4□□□□□ -1.87
CCDC144B-209ENST00000621104 IGLV1-44P01699 117 aa3.4□□□□□ -1.87
CCDC144B-209ENST00000621104 RB1P06400 928 aa3.4□□□□□ -1.87
CCDC144B-209ENST00000621104 H1F0P07305 194 aaKnown RBP3.4□□□□□ -1.87
CCDC144B-209ENST00000621104 PLA2G4BP0C869 781 aa3.4□□□□□ -1.87
CCDC144B-209ENST00000621104 ITGA3P26006 1051 aa3.4□□□□□ -1.87
CCDC144B-209ENST00000621104 ALDH4A1P30038 563 aa3.4□□□□□ -1.87
CCDC144B-209ENST00000621104 CHRNB4P30926 498 aa3.4□□□□□ -1.87
CCDC144B-209ENST00000621104 PSMB10P40306 273 aa3.4□□□□□ -1.87
CCDC144B-209ENST00000621104 CD81P60033 236 aa3.4□□□□□ -1.87
CCDC144B-209ENST00000621104 TMEM198Q66K66 360 aa3.4□□□□□ -1.87
CCDC144B-209ENST00000621104 KIAA0930Q6ICG6 404 aaPredicted RBP3.4□□□□□ -1.87
CCDC144B-209ENST00000621104 FAM53AQ6NSI3 398 aaPredicted RBP3.4□□□□□ -1.87
CCDC144B-209ENST00000621104 LINGO4Q6UY18 593 aa3.4□□□□□ -1.87
CCDC144B-209ENST00000621104 C15orf39Q6ZRI6 1047 aa3.4□□□□□ -1.87
CCDC144B-209ENST00000621104 SCYL3Q8IZE3 742 aa3.4□□□□□ -1.87
CCDC144B-209ENST00000621104 ANKRD52Q8NB46 1076 aa3.4□□□□□ -1.87
CCDC144B-209ENST00000621104 WDR20Q8TBZ3 569 aa3.4□□□□□ -1.87
CCDC144B-209ENST00000621104 SLC47A1Q96FL8 570 aa3.4□□□□□ -1.87
CCDC144B-209ENST00000621104 SENP5Q96HI0 755 aaPredicted RBP3.4□□□□□ -1.87
CCDC144B-209ENST00000621104 GAD1Q99259 594 aa3.4□□□□□ -1.87
CCDC144B-209ENST00000621104 HGH1Q9BTY7 390 aa3.4□□□□□ -1.87
CCDC144B-209ENST00000621104 MOV10L1Q9BXT6 1211 aaKnown RBP3.4□□□□□ -1.87
CCDC144B-209ENST00000621104 COQ3Q9NZJ6 369 aa3.4□□□□□ -1.87
CCDC144B-209ENST00000621104 HHLA1C9JL84 531 aa3.39□□□□□ -1.87
CCDC144B-209ENST00000621104 SYNCRIPO60506 623 aaKnown RBP3.39□□□□□ -1.87
CCDC144B-209ENST00000621104 CLPTM1O96005 669 aa3.39□□□□□ -1.87
CCDC144B-209ENST00000621104 ARF3P61204 181 aaPredicted RBP3.39□□□□□ -1.87
CCDC144B-209ENST00000621104 ARF1P84077 181 aaKnown RBP3.39□□□□□ -1.87
CCDC144B-209ENST00000621104 ITGA9Q13797 1035 aa3.39□□□□□ -1.87
CCDC144B-209ENST00000621104 KIAA1644Q3SXP7 199 aa3.39□□□□□ -1.87
CCDC144B-209ENST00000621104 GCNT6Q5T4J0 391 aa3.39□□□□□ -1.87
CCDC144B-209ENST00000621104 KLC3Q6P597 504 aa3.39□□□□□ -1.87
CCDC144B-209ENST00000621104 MFSD6Q6ZSS7 791 aa3.39□□□□□ -1.87
CCDC144B-209ENST00000621104 PLD3Q8IV08 490 aa3.39□□□□□ -1.87
CCDC144B-209ENST00000621104 ZNF248Q8NDW4 579 aa3.39□□□□□ -1.87
CCDC144B-209ENST00000621104 CTCFLQ8NI51 663 aaPredicted RBP3.39□□□□□ -1.87
CCDC144B-209ENST00000621104 DDOQ99489 341 aa3.39□□□□□ -1.87
CCDC144B-209ENST00000621104 GFRA4Q9GZZ7 299 aa3.39□□□□□ -1.87
CCDC144B-209ENST00000621104 DNAJC18Q9H819 358 aa3.39□□□□□ -1.87
CCDC144B-209ENST00000621104 PAG1Q9NWQ8 432 aa3.39□□□□□ -1.87
CCDC144B-209ENST00000621104 MIOSQ9NXC5 875 aa3.39□□□□□ -1.87
CCDC144B-209ENST00000621104 SLCO1B7G3V0H7 640 aa3.38□□□□□ -1.87
CCDC144B-209ENST00000621104 SLC22A2O15244 555 aa3.38□□□□□ -1.87
CCDC144B-209ENST00000621104 MITFO75030 526 aaPredicted RBP3.38□□□□□ -1.87
CCDC144B-209ENST00000621104 FAM157CP0CG43 387 aa3.38□□□□□ -1.87
CCDC144B-209ENST00000621104 PRLRP16471 622 aa3.38□□□□□ -1.87
CCDC144B-209ENST00000621104 CKMT2P17540 419 aa3.38□□□□□ -1.87
CCDC144B-209ENST00000621104 TNFAIP3P21580 790 aa3.38□□□□□ -1.87
CCDC144B-209ENST00000621104 EPHA2P29317 976 aa3.38□□□□□ -1.87
CCDC144B-209ENST00000621104 RXRGP48443 463 aa3.38□□□□□ -1.87
CCDC144B-209ENST00000621104 THOP1P52888 689 aa3.38□□□□□ -1.87
CCDC144B-209ENST00000621104 MRPS5P82675 430 aaKnown RBP3.38□□□□□ -1.87
CCDC144B-209ENST00000621104 KCNC3Q14003 757 aa3.38□□□□□ -1.87
CCDC144B-209ENST00000621104 LCE1FQ5T754 118 aa3.38□□□□□ -1.87
CCDC144B-209ENST00000621104 ZC2HC1BQ5TFG8 222 aa3.38□□□□□ -1.87
CCDC144B-209ENST00000621104 FAM180BQ6P0A1 224 aa3.38□□□□□ -1.87
CCDC144B-209ENST00000621104 DENND5BQ6ZUT9 1274 aa3.38□□□□□ -1.87
CCDC144B-209ENST00000621104 MAATS1Q7Z4T9 603 aa3.38□□□□□ -1.87
CCDC144B-209ENST00000621104 ISCA2Q86U28 154 aa3.38□□□□□ -1.87
CCDC144B-209ENST00000621104 SEMA4DQ92854 862 aa3.38□□□□□ -1.87
CCDC144B-209ENST00000621104 LRRC59Q96AG4 307 aaKnown RBP3.38□□□□□ -1.87
CCDC144B-209ENST00000621104 CEP295NLQ96MC4 621 aa3.38□□□□□ -1.87
CCDC144B-209ENST00000621104 NAP1L4Q99733 375 aaKnown RBP3.38□□□□□ -1.87
CCDC144B-209ENST00000621104 TREX2Q9BQ50 279 aaPredicted RBP3.38□□□□□ -1.87
CCDC144B-209ENST00000621104 ZHX3Q9H4I2 956 aa3.38□□□□□ -1.87
CCDC144B-209ENST00000621104 EIF2B3Q9NR50 452 aaKnown RBP3.38□□□□□ -1.87
CCDC144B-209ENST00000621104 OLFML3Q9NRN5 406 aa3.38□□□□□ -1.87
CCDC144B-209ENST00000621104 ECHDC1Q9NTX5 307 aa3.38□□□□□ -1.87
CCDC144B-209ENST00000621104 SEPT11Q9NVA2 429 aaKnown RBP3.38□□□□□ -1.87
CCDC144B-209ENST00000621104 ASTN2O75129 1339 aaPredicted RBP3.38□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms