RNA–Protein interactions for RNA: ENST00000620854.4

NEDD9-216, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 5 BASIC

Gene NEDD9, Length 4,086 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-216ENST00000620854 KRT75O95678 551 aa6.87□□□□□ -1.31
NEDD9-216ENST00000620854 LRG1P02750 347 aa6.87□□□□□ -1.31
NEDD9-216ENST00000620854 SLC2A4P14672 509 aa6.87□□□□□ -1.31
NEDD9-216ENST00000620854 DAOAP59103 153 aa6.87□□□□□ -1.31
NEDD9-216ENST00000620854 DSC2Q02487 901 aa6.87□□□□□ -1.31
NEDD9-216ENST00000620854 ARHGEF7Q14155 803 aa6.87□□□□□ -1.31
NEDD9-216ENST00000620854 ACAP2Q15057 778 aa6.87□□□□□ -1.31
NEDD9-216ENST00000620854 UGT3A1Q6NUS8 523 aa6.87□□□□□ -1.31
NEDD9-216ENST00000620854 ENPP6Q6UWR7 440 aa6.87□□□□□ -1.31
NEDD9-216ENST00000620854 TAC4Q86UU9 113 aa6.87□□□□□ -1.31
NEDD9-216ENST00000620854 METTL6Q8TCB7 284 aa6.87□□□□□ -1.31
NEDD9-216ENST00000620854 MRGPRX2Q96LB1 330 aa6.87□□□□□ -1.31
NEDD9-216ENST00000620854 XRN2Q9H0D6 950 aaKnown RBP eCLIP6.87□□□□□ -1.319e-6■■□□□ 13.2
NEDD9-216ENST00000620854 ABCG8Q9H221 673 aa6.87□□□□□ -1.31
NEDD9-216ENST00000620854 RASSF1Q9NS23 344 aa6.87□□□□□ -1.31
NEDD9-216ENST00000620854 CREBZFQ9NS37 354 aa6.87□□□□□ -1.31
NEDD9-216ENST00000620854 TEKT2Q9UIF3 430 aa6.87□□□□□ -1.31
NEDD9-216ENST00000620854 ARL5AQ9Y689 179 aa6.87□□□□□ -1.31
NEDD9-216ENST00000620854 C2orf81A6NN90 581 aa6.87□□□□□ -1.31
NEDD9-216ENST00000620854 SOBPA7XYQ1 873 aa6.87□□□□□ -1.31
NEDD9-216ENST00000620854 A8MX80 341 aa6.87□□□□□ -1.31
NEDD9-216ENST00000620854 ZNF701M0R085 212 aaPredicted RBP6.87□□□□□ -1.31
NEDD9-216ENST00000620854 SLC22A3O75751 556 aa6.87□□□□□ -1.31
NEDD9-216ENST00000620854 CAPN15O75808 1086 aa6.87□□□□□ -1.31
NEDD9-216ENST00000620854 DIRAS1O95057 198 aa6.87□□□□□ -1.31
NEDD9-216ENST00000620854 F2P00734 622 aa6.87□□□□□ -1.31
NEDD9-216ENST00000620854 CYBBP04839 570 aa6.87□□□□□ -1.31
NEDD9-216ENST00000620854 CRHBPP24387 322 aa6.87□□□□□ -1.31
NEDD9-216ENST00000620854 FMO4P31512 558 aa6.87□□□□□ -1.31
NEDD9-216ENST00000620854 DNAJB13P59910 316 aa6.87□□□□□ -1.31
NEDD9-216ENST00000620854 HERVK_113P63132 956 aa6.87□□□□□ -1.31
NEDD9-216ENST00000620854 CD47Q08722 323 aa6.87□□□□□ -1.31
NEDD9-216ENST00000620854 BNIP2Q12982 314 aa6.87□□□□□ -1.31
NEDD9-216ENST00000620854 TRIM32Q13049 653 aa6.87□□□□□ -1.31
NEDD9-216ENST00000620854 KCNAB2Q13303 367 aa6.87□□□□□ -1.31
NEDD9-216ENST00000620854 MTA1Q13330 715 aa6.87□□□□□ -1.31
NEDD9-216ENST00000620854 TSNQ15631 228 aaKnown RBP6.87□□□□□ -1.31
NEDD9-216ENST00000620854 PSMD5Q16401 504 aa6.87□□□□□ -1.31
NEDD9-216ENST00000620854 SYTL3Q4VX76 610 aa6.87□□□□□ -1.31
NEDD9-216ENST00000620854 LCN8Q6JVE9 175 aa6.87□□□□□ -1.31
NEDD9-216ENST00000620854 SPRED1Q7Z699 444 aa6.87□□□□□ -1.31
NEDD9-216ENST00000620854 RBM23Q86U06 439 aaKnown RBP6.87□□□□□ -1.31
NEDD9-216ENST00000620854 FBXO39Q8N4B4 442 aa6.87□□□□□ -1.31
NEDD9-216ENST00000620854 DTWD1Q8N5C7 304 aa6.87□□□□□ -1.31
NEDD9-216ENST00000620854 PACRGLQ8N7B6 248 aa6.87□□□□□ -1.31
NEDD9-216ENST00000620854 OR10A6Q8NH74 314 aa6.87□□□□□ -1.31
NEDD9-216ENST00000620854 SNX27Q96L92 541 aa6.87□□□□□ -1.31
NEDD9-216ENST00000620854 ZNF347Q96SE7 839 aa6.87□□□□□ -1.31
NEDD9-216ENST00000620854 SMOQ99835 787 aa6.87□□□□□ -1.31
NEDD9-216ENST00000620854 ERVK-6Q9BXR3 956 aa6.87□□□□□ -1.31
NEDD9-216ENST00000620854 ACTR8Q9H981 624 aa6.87□□□□□ -1.31
NEDD9-216ENST00000620854 ZMYM5Q9UJ78 669 aa6.87□□□□□ -1.31
NEDD9-216ENST00000620854 PCDHB5Q9Y5E4 795 aa6.87□□□□□ -1.31
NEDD9-216ENST00000620854 MYO9BQ13459 2157 aa6.87□□□□□ -1.31
NEDD9-216ENST00000620854 RGPD3A6NKT7 1758 aaPredicted RBP6.87□□□□□ -1.31
NEDD9-216ENST00000620854 RGPD4Q7Z3J3 1758 aa6.87□□□□□ -1.31
NEDD9-216ENST00000620854 J3KR12 359 aa6.87□□□□□ -1.31
NEDD9-216ENST00000620854 ABCB7O75027 752 aa6.87□□□□□ -1.31
NEDD9-216ENST00000620854 GPIP06744 558 aa6.87□□□□□ -1.31
NEDD9-216ENST00000620854 SELPP16109 830 aa6.87□□□□□ -1.31
NEDD9-216ENST00000620854 MZF1P28698 734 aaPredicted RBP6.87□□□□□ -1.31
NEDD9-216ENST00000620854 RPL9P32969 192 aaKnown RBP6.87□□□□□ -1.31
NEDD9-216ENST00000620854 PRIM2P49643 509 aa6.87□□□□□ -1.31
NEDD9-216ENST00000620854 ACADVLP49748 655 aa6.87□□□□□ -1.31
NEDD9-216ENST00000620854 BLVRAP53004 296 aa6.87□□□□□ -1.31
NEDD9-216ENST00000620854 TMBIM6P55061 237 aa6.87□□□□□ -1.31
NEDD9-216ENST00000620854 SYT16Q17RD7 645 aa6.87□□□□□ -1.31
NEDD9-216ENST00000620854 CTU2Q2VPK5 515 aaKnown RBP6.87□□□□□ -1.31
NEDD9-216ENST00000620854 BLOC1S3Q6QNY0 202 aa6.87□□□□□ -1.31
NEDD9-216ENST00000620854 TMEM199Q8N511 208 aa6.87□□□□□ -1.31
NEDD9-216ENST00000620854 MINDY1Q8N5J2 469 aa6.87□□□□□ -1.31
NEDD9-216ENST00000620854 OR13C4Q8NGS5 318 aa6.87□□□□□ -1.31
NEDD9-216ENST00000620854 ADAMTS16Q8TE57 1224 aa6.87□□□□□ -1.31
NEDD9-216ENST00000620854 UTP15Q8TED0 518 aaKnown RBP6.87□□□□□ -1.31
NEDD9-216ENST00000620854 FAM120BQ96EK7 910 aaKnown RBP6.87□□□□□ -1.31
NEDD9-216ENST00000620854 SMARCD1Q96GM5 515 aa6.87□□□□□ -1.31
NEDD9-216ENST00000620854 MS4A4AQ96JQ5 239 aa6.87□□□□□ -1.31
NEDD9-216ENST00000620854 FCRL2Q96LA5 508 aaPredicted RBP6.87□□□□□ -1.31
NEDD9-216ENST00000620854 SMIM14Q96QK8 99 aa6.87□□□□□ -1.31
NEDD9-216ENST00000620854 NODALQ96S42 347 aa6.87□□□□□ -1.31
NEDD9-216ENST00000620854 C6orf62Q9GZU0 229 aaPredicted RBP6.87□□□□□ -1.31
NEDD9-216ENST00000620854 CRTAC1Q9NQ79 661 aa6.87□□□□□ -1.31
NEDD9-216ENST00000620854 INTS10Q9NVR2 710 aaKnown RBP6.87□□□□□ -1.31
NEDD9-216ENST00000620854 SMPD4Q9NXE4 827 aa6.87□□□□□ -1.31
NEDD9-216ENST00000620854 GTF2IRD1Q9UHL9 959 aa6.87□□□□□ -1.31
NEDD9-216ENST00000620854 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP6.87□□□□□ -1.31
NEDD9-216ENST00000620854 GABRQQ9UN88 632 aa6.87□□□□□ -1.31
NEDD9-216ENST00000620854 EIF3LQ9Y262 564 aaKnown RBP6.87□□□□□ -1.31
NEDD9-216ENST00000620854 DERAQ9Y315 318 aa6.87□□□□□ -1.31
NEDD9-216ENST00000620854 PCDHA9Q9Y5H5 950 aa6.87□□□□□ -1.31
NEDD9-216ENST00000620854 CDC7O00311 574 aa6.86□□□□□ -1.31
NEDD9-216ENST00000620854 TBX1O43435 398 aa6.86□□□□□ -1.31
NEDD9-216ENST00000620854 MITFO75030 526 aaPredicted RBP6.86□□□□□ -1.31
NEDD9-216ENST00000620854 SLC2A3P11169 496 aa6.86□□□□□ -1.31
NEDD9-216ENST00000620854 FCGR1AP12314 374 aa6.86□□□□□ -1.31
NEDD9-216ENST00000620854 HSD17B1P14061 328 aa6.86□□□□□ -1.31
NEDD9-216ENST00000620854 HRH2P25021 359 aa6.86□□□□□ -1.31
NEDD9-216ENST00000620854 PGFP49763 221 aa6.86□□□□□ -1.31
NEDD9-216ENST00000620854 SERPINH1P50454 418 aaKnown RBP6.86□□□□□ -1.31
NEDD9-216ENST00000620854 POLR2JP52435 117 aaKnown RBP6.86□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms