RNA–Protein interactions for RNA: ENST00000620787.4

PDLIM3-212, Transcript of PDZ and LIM domain 3, humanhuman

TSL 4 BASIC

Gene PDLIM3, Length 2,352 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM3-212ENST00000620787 RIMKLBQ9ULI2 386 aa19.33■□□□□ 0.68
PDLIM3-212ENST00000620787 E2F3O00716 465 aa19.32■□□□□ 0.68
PDLIM3-212ENST00000620787 GRIK1P39086 918 aa19.32■□□□□ 0.68
PDLIM3-212ENST00000620787 EIF2B2P49770 351 aaKnown RBP19.32■□□□□ 0.68
PDLIM3-212ENST00000620787 PWP1Q13610 501 aa19.32■□□□□ 0.68
PDLIM3-212ENST00000620787 AAK1Q2M2I8 961 aa19.32■□□□□ 0.68
PDLIM3-212ENST00000620787 PLA2G4EQ3MJ16 856 aa19.32■□□□□ 0.68
PDLIM3-212ENST00000620787 TLK2Q86UE8 772 aa19.32■□□□□ 0.68
PDLIM3-212ENST00000620787 FBXO30Q8TB52 745 aa19.32■□□□□ 0.68
PDLIM3-212ENST00000620787 UGT2B28Q9BY64 529 aa19.32■□□□□ 0.68
PDLIM3-212ENST00000620787 WDR12Q9GZL7 423 aaKnown RBP19.32■□□□□ 0.68
PDLIM3-212ENST00000620787 GORASP2Q9H8Y8 452 aa19.32■□□□□ 0.68
PDLIM3-212ENST00000620787 GIN1Q9NXP7 522 aa19.32■□□□□ 0.68
PDLIM3-212ENST00000620787 UTS2RQ9UKP6 389 aa19.32■□□□□ 0.68
PDLIM3-212ENST00000620787 ST14Q9Y5Y6 855 aa19.32■□□□□ 0.68
PDLIM3-212ENST00000620787 PLXNA3P51805 1871 aa19.32■□□□□ 0.68
PDLIM3-212ENST00000620787 C17orf102A2RUQ5 167 aa19.32■□□□□ 0.68
PDLIM3-212ENST00000620787 SLC1A7O00341 560 aa19.32■□□□□ 0.68
PDLIM3-212ENST00000620787 ANKRD28O15084 1053 aa19.32■□□□□ 0.68
PDLIM3-212ENST00000620787 B3GAT3O94766 335 aa19.32■□□□□ 0.68
PDLIM3-212ENST00000620787 TSPAN12O95859 305 aa19.32■□□□□ 0.68
PDLIM3-212ENST00000620787 CST1P01037 141 aa19.32■□□□□ 0.68
PDLIM3-212ENST00000620787 G6PDP11413 515 aa19.32■□□□□ 0.68
PDLIM3-212ENST00000620787 ERVPABLB-1P60509 514 aa19.32■□□□□ 0.68
PDLIM3-212ENST00000620787 IL10RBQ08334 325 aa19.32■□□□□ 0.68
PDLIM3-212ENST00000620787 LAPTM5Q13571 262 aa19.32■□□□□ 0.68
PDLIM3-212ENST00000620787 NECAB2Q7Z6G3 386 aa19.32■□□□□ 0.68
PDLIM3-212ENST00000620787 OR52B6Q8NGF0 335 aa19.32■□□□□ 0.68
PDLIM3-212ENST00000620787 FIG4Q92562 907 aa19.32■□□□□ 0.68
PDLIM3-212ENST00000620787 IGSF8Q969P0 613 aa19.32■□□□□ 0.68
PDLIM3-212ENST00000620787 CDK15Q96Q40 435 aa19.32■□□□□ 0.68
PDLIM3-212ENST00000620787 ZNF382Q96SR6 550 aa19.32■□□□□ 0.68
PDLIM3-212ENST00000620787 POLR1EQ9GZS1 481 aaKnown RBP19.32■□□□□ 0.68
PDLIM3-212ENST00000620787 ST3GAL5Q9UNP4 418 aa19.32■□□□□ 0.68
PDLIM3-212ENST00000620787 TMEM247A6NEH6 219 aa19.31■□□□□ 0.68
PDLIM3-212ENST00000620787 PDHXO00330 501 aa19.31■□□□□ 0.68
PDLIM3-212ENST00000620787 DNAJB5O75953 348 aa19.31■□□□□ 0.68
PDLIM3-212ENST00000620787 HTR6P50406 440 aa19.31■□□□□ 0.68
PDLIM3-212ENST00000620787 ISL1P61371 349 aa19.31■□□□□ 0.68
PDLIM3-212ENST00000620787 CACNB2Q08289 660 aaPredicted RBP19.31■□□□□ 0.68
PDLIM3-212ENST00000620787 TOP3AQ13472 1001 aaPredicted RBP19.31■□□□□ 0.68
PDLIM3-212ENST00000620787 PERM1Q5SV97 790 aa19.31■□□□□ 0.68
PDLIM3-212ENST00000620787 CYP20A1Q6UW02 462 aa19.31■□□□□ 0.68
PDLIM3-212ENST00000620787 FAM126BQ8IXS8 530 aa19.31■□□□□ 0.68
PDLIM3-212ENST00000620787 OR8J3Q8NGG0 315 aa19.31■□□□□ 0.68
PDLIM3-212ENST00000620787 MTRRQ9UBK8 725 aa19.31■□□□□ 0.68
PDLIM3-212ENST00000620787 SNX5Q9Y5X3 404 aa19.31■□□□□ 0.68
PDLIM3-212ENST00000620787 IGLV3-10A0A075B6K4 115 aa19.3■□□□□ 0.68
PDLIM3-212ENST00000620787 HTR3EA5X5Y0 456 aa19.3■□□□□ 0.68
PDLIM3-212ENST00000620787 AQP9O43315 295 aa19.3■□□□□ 0.68
PDLIM3-212ENST00000620787 DFNA5O60443 496 aa19.3■□□□□ 0.68
PDLIM3-212ENST00000620787 PBX3P40426 434 aa19.3■□□□□ 0.68
PDLIM3-212ENST00000620787 ZNF140P52738 457 aaPredicted RBP19.3■□□□□ 0.68
PDLIM3-212ENST00000620787 PLIN5Q00G26 463 aa19.3■□□□□ 0.68
PDLIM3-212ENST00000620787 IFITM3Q01628 133 aa19.3■□□□□ 0.68
PDLIM3-212ENST00000620787 OVOS1Q6IE37 1185 aa19.3■□□□□ 0.68
PDLIM3-212ENST00000620787 LETMD1Q6P1Q0 360 aa19.3■□□□□ 0.68
PDLIM3-212ENST00000620787 FRA10AC1Q70Z53 315 aa19.3■□□□□ 0.68
PDLIM3-212ENST00000620787 SVOPLQ8N434 492 aa19.3■□□□□ 0.68
PDLIM3-212ENST00000620787 NKAPQ8N5F7 415 aaKnown RBP19.3■□□□□ 0.68
PDLIM3-212ENST00000620787 AADATQ8N5Z0 425 aa19.3■□□□□ 0.68
PDLIM3-212ENST00000620787 VMP1Q96GC9 406 aa19.3■□□□□ 0.68
PDLIM3-212ENST00000620787 NODALQ96S42 347 aa19.3■□□□□ 0.68
PDLIM3-212ENST00000620787 RBM4BQ9BQ04 359 aaKnown RBP19.3■□□□□ 0.68
PDLIM3-212ENST00000620787 PSD2Q9BQI7 771 aa19.3■□□□□ 0.68
PDLIM3-212ENST00000620787 HEPHQ9BQS7 1158 aa19.3■□□□□ 0.68
PDLIM3-212ENST00000620787 C17orf80Q9BSJ5 609 aa19.3■□□□□ 0.68
PDLIM3-212ENST00000620787 RBM4Q9BWF3 364 aaKnown RBP19.3■□□□□ 0.68
PDLIM3-212ENST00000620787 NLE1Q9NVX2 485 aaPredicted RBP19.3■□□□□ 0.68
PDLIM3-212ENST00000620787 VAPAQ9P0L0 249 aa19.3■□□□□ 0.68
PDLIM3-212ENST00000620787 DNMT3BQ9UBC3 853 aaKnown RBP19.3■□□□□ 0.68
PDLIM3-212ENST00000620787 GIT1Q9Y2X7 761 aa19.3■□□□□ 0.68
PDLIM3-212ENST00000620787 MGEA5O60502 916 aa19.3■□□□□ 0.68
PDLIM3-212ENST00000620787 CNOT3O75175 753 aaKnown RBP19.3■□□□□ 0.68
PDLIM3-212ENST00000620787 NDUFS2O75306 463 aa19.3■□□□□ 0.68
PDLIM3-212ENST00000620787 EPOP01588 193 aa19.3■□□□□ 0.68
PDLIM3-212ENST00000620787 HOXD12P35452 270 aa19.3■□□□□ 0.68
PDLIM3-212ENST00000620787 TMED10P49755 219 aaKnown RBP19.3■□□□□ 0.68
PDLIM3-212ENST00000620787 TBX4P57082 545 aa19.3■□□□□ 0.68
PDLIM3-212ENST00000620787 SERINC3Q13530 473 aa19.3■□□□□ 0.68
PDLIM3-212ENST00000620787 MAPRE1Q15691 268 aaKnown RBP19.3■□□□□ 0.68
PDLIM3-212ENST00000620787 SLCO6A1Q86UG4 719 aa19.3■□□□□ 0.68
PDLIM3-212ENST00000620787 SPATA2LQ8IUW3 424 aaPredicted RBP19.3■□□□□ 0.68
PDLIM3-212ENST00000620787 ZNF548Q8NEK5 533 aaPredicted RBP19.3■□□□□ 0.68
PDLIM3-212ENST00000620787 OR2T12Q8NG77 320 aa19.3■□□□□ 0.68
PDLIM3-212ENST00000620787 ZFP90Q8TF47 636 aa19.3■□□□□ 0.68
PDLIM3-212ENST00000620787 SLC47A1Q96FL8 570 aa19.3■□□□□ 0.68
PDLIM3-212ENST00000620787 FAM32AQ9Y421 112 aaKnown RBP19.3■□□□□ 0.68
PDLIM3-212ENST00000620787 M0QZQ0 153 aa19.29■□□□□ 0.68
PDLIM3-212ENST00000620787 TOR1BO14657 336 aa19.29■□□□□ 0.68
PDLIM3-212ENST00000620787 GMNNO75496 209 aa19.29■□□□□ 0.68
PDLIM3-212ENST00000620787 ACVRL1P37023 503 aa19.29■□□□□ 0.68
PDLIM3-212ENST00000620787 ZNF691Q5VV52 312 aa19.29■□□□□ 0.68
PDLIM3-212ENST00000620787 SPESP1Q6UW49 350 aa19.29■□□□□ 0.68
PDLIM3-212ENST00000620787 FKBP9P1Q75LS8 142 aa19.29■□□□□ 0.68
PDLIM3-212ENST00000620787 CIR1Q86X95 450 aaPredicted RBP19.29■□□□□ 0.68
PDLIM3-212ENST00000620787 CADM3Q8N126 398 aa19.29■□□□□ 0.68
PDLIM3-212ENST00000620787 TRIB3Q96RU7 358 aa19.29■□□□□ 0.68
PDLIM3-212ENST00000620787 LIMD1Q9UGP4 676 aa19.29■□□□□ 0.68
PDLIM3-212ENST00000620787 ADGRE2Q9UHX3 823 aa19.29■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms