RNA–Protein interactions for RNA: ENST00000620393.4

CPNE3-209, Transcript of copine 3, humanhuman

TSL 5

Gene CPNE3, Length 680 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-209ENST00000620393 PTK2BQ14289 1009 aa7.89□□□□□ -1.15
CPNE3-209ENST00000620393 TTLL9Q3SXZ7 439 aa7.89□□□□□ -1.15
CPNE3-209ENST00000620393 ZNF658BQ4V348 819 aaPredicted RBP7.89□□□□□ -1.15
CPNE3-209ENST00000620393 PYCR3Q53H96 274 aa7.89□□□□□ -1.15
CPNE3-209ENST00000620393 PLEKHS1Q5SXH7 462 aa7.89□□□□□ -1.15
CPNE3-209ENST00000620393 AGAP9Q5VTM2 703 aa7.89□□□□□ -1.15
CPNE3-209ENST00000620393 DOK6Q6PKX4 331 aa7.89□□□□□ -1.15
CPNE3-209ENST00000620393 CYHR1Q6ZMK1 362 aa7.89□□□□□ -1.15
CPNE3-209ENST00000620393 CDHR3Q6ZTQ4 885 aa7.89□□□□□ -1.15
CPNE3-209ENST00000620393 OTOAQ7RTW8 1153 aa7.89□□□□□ -1.15
CPNE3-209ENST00000620393 MTERF4Q7Z6M4 381 aaKnown RBP7.89□□□□□ -1.15
CPNE3-209ENST00000620393 C11orf96Q7Z7L8 435 aa7.89□□□□□ -1.15
CPNE3-209ENST00000620393 TBC1D1Q86TI0 1168 aaPredicted RBP7.89□□□□□ -1.15
CPNE3-209ENST00000620393 PIM3Q86V86 326 aa7.89□□□□□ -1.15
CPNE3-209ENST00000620393 LRRTM4Q86VH4 590 aa7.89□□□□□ -1.15
CPNE3-209ENST00000620393 IQCHQ86VS3 1027 aa7.89□□□□□ -1.15
CPNE3-209ENST00000620393 TRAPPC5Q8IUR0 188 aa7.89□□□□□ -1.15
CPNE3-209ENST00000620393 CFAP206Q8IYR0 622 aa7.89□□□□□ -1.15
CPNE3-209ENST00000620393 PLD6Q8N2A8 252 aaKnown RBP7.89□□□□□ -1.15
CPNE3-209ENST00000620393 ZBTB2Q8N680 514 aa7.89□□□□□ -1.15
CPNE3-209ENST00000620393 BEND7Q8N7W2 519 aaPredicted RBP7.89□□□□□ -1.15
CPNE3-209ENST00000620393 OR13H1Q8NG92 308 aa7.89□□□□□ -1.15
CPNE3-209ENST00000620393 OR56A4Q8NGH8 313 aa7.89□□□□□ -1.15
CPNE3-209ENST00000620393 OR2L2Q8NH16 312 aa7.89□□□□□ -1.15
CPNE3-209ENST00000620393 GIMAP7Q8NHV1 300 aa7.89□□□□□ -1.15
CPNE3-209ENST00000620393 CD200R1Q8TD46 325 aa7.89□□□□□ -1.15
CPNE3-209ENST00000620393 DENND1AQ8TEH3 1009 aa7.89□□□□□ -1.15
CPNE3-209ENST00000620393 ANKRD49Q8WVL7 239 aa7.89□□□□□ -1.15
CPNE3-209ENST00000620393 ASZ1Q8WWH4 475 aa7.89□□□□□ -1.15
CPNE3-209ENST00000620393 SNX19Q92543 992 aa7.89□□□□□ -1.15
CPNE3-209ENST00000620393 NXNL1Q96CM4 212 aa7.89□□□□□ -1.15
CPNE3-209ENST00000620393 HSPA12BQ96MM6 686 aa7.89□□□□□ -1.15
CPNE3-209ENST00000620393 WDR92Q96MX6 357 aa7.89□□□□□ -1.15
CPNE3-209ENST00000620393 SLC6A18Q96N87 628 aa7.89□□□□□ -1.15
CPNE3-209ENST00000620393 GPR78Q96P69 363 aa7.89□□□□□ -1.15
CPNE3-209ENST00000620393 PRR14Q9BWN1 585 aa7.89□□□□□ -1.15
CPNE3-209ENST00000620393 C1QTNF1Q9BXJ1 281 aa7.89□□□□□ -1.15
CPNE3-209ENST00000620393 NMRAL1Q9HBL8 299 aa7.89□□□□□ -1.15
CPNE3-209ENST00000620393 SARS2Q9NP81 518 aaKnown RBP7.89□□□□□ -1.15
CPNE3-209ENST00000620393 C11orf16Q9NQ32 467 aa7.89□□□□□ -1.15
CPNE3-209ENST00000620393 AASDHPPTQ9NRN7 309 aa7.89□□□□□ -1.15
CPNE3-209ENST00000620393 GPR27Q9NS67 375 aa7.89□□□□□ -1.15
CPNE3-209ENST00000620393 IGSF5Q9NSI5 407 aa7.89□□□□□ -1.15
CPNE3-209ENST00000620393 PCMTD2Q9NV79 361 aa7.89□□□□□ -1.15
CPNE3-209ENST00000620393 ZNHIT2Q9UHR6 403 aa7.89□□□□□ -1.15
CPNE3-209ENST00000620393 GRID1Q9ULK0 1009 aa7.89□□□□□ -1.15
CPNE3-209ENST00000620393 PLLPQ9Y342 182 aa7.89□□□□□ -1.15
CPNE3-209ENST00000620393 TTC28Q96AY4 2481 aa7.89□□□□□ -1.15
CPNE3-209ENST00000620393 NUMA1Q14980 2115 aa7.88□□□□□ -1.15
CPNE3-209ENST00000620393 A0A0C4DFX4 3053 aa7.88□□□□□ -1.15
CPNE3-209ENST00000620393 SPTY2D1-AS1A0A0U1RR47 76 aa7.88□□□□□ -1.15
CPNE3-209ENST00000620393 SLC5A10A0PJK1 596 aa7.88□□□□□ -1.15
CPNE3-209ENST00000620393 TMEM120BA0PK00 339 aa7.88□□□□□ -1.15
CPNE3-209ENST00000620393 TLR4O00206 839 aa7.88□□□□□ -1.15
CPNE3-209ENST00000620393 EIF3FO00303 357 aaPredicted RBP7.88□□□□□ -1.15
CPNE3-209ENST00000620393 LIN7AO14910 233 aaPredicted RBP7.88□□□□□ -1.15
CPNE3-209ENST00000620393 GLRA3O75311 464 aa7.88□□□□□ -1.15
CPNE3-209ENST00000620393 TSPAN12O95859 305 aa7.88□□□□□ -1.15
CPNE3-209ENST00000620393 WNT1P04628 370 aa7.88□□□□□ -1.15
CPNE3-209ENST00000620393 APOA4P06727 396 aa7.88□□□□□ -1.15
CPNE3-209ENST00000620393 LTA4HP09960 611 aaKnown RBP7.88□□□□□ -1.15
CPNE3-209ENST00000620393 THEGLP0DJG4 465 aa7.88□□□□□ -1.15
CPNE3-209ENST00000620393 ENO3P13929 434 aaPredicted RBP7.88□□□□□ -1.15
CPNE3-209ENST00000620393 CD1DP15813 335 aa7.88□□□□□ -1.15
CPNE3-209ENST00000620393 ZNF37AP17032 561 aaPredicted RBP7.88□□□□□ -1.15
CPNE3-209ENST00000620393 OAS2P29728 719 aaKnown RBP7.88□□□□□ -1.15
CPNE3-209ENST00000620393 HPDP32754 393 aaPredicted RBP7.88□□□□□ -1.15
CPNE3-209ENST00000620393 RPA3P35244 121 aaPredicted RBP7.88□□□□□ -1.15
CPNE3-209ENST00000620393 RGS4P49798 205 aa7.88□□□□□ -1.15
CPNE3-209ENST00000620393 SRP54P61011 504 aaKnown RBP7.88□□□□□ -1.15
CPNE3-209ENST00000620393 ATP6V0D1P61421 351 aa7.88□□□□□ -1.15
CPNE3-209ENST00000620393 IRF9Q00978 393 aa7.88□□□□□ -1.15
CPNE3-209ENST00000620393 PLOD1Q02809 727 aaPredicted RBP7.88□□□□□ -1.15
CPNE3-209ENST00000620393 HSPA14Q0VDF9 509 aa7.88□□□□□ -1.15
CPNE3-209ENST00000620393 SRSF5Q13243 272 aaKnown RBP7.88□□□□□ -1.15
CPNE3-209ENST00000620393 CSHL1Q14406 222 aa7.88□□□□□ -1.15
CPNE3-209ENST00000620393 GBX1Q14549 363 aa7.88□□□□□ -1.15
CPNE3-209ENST00000620393 ACAP2Q15057 778 aa7.88□□□□□ -1.15
CPNE3-209ENST00000620393 ANGPT1Q15389 498 aa7.88□□□□□ -1.15
CPNE3-209ENST00000620393 FAM83EQ2M2I3 478 aa7.88□□□□□ -1.15
CPNE3-209ENST00000620393 TSNAXIP1Q2TAA8 658 aa7.88□□□□□ -1.15
CPNE3-209ENST00000620393 PLK5Q496M5 336 aa7.88□□□□□ -1.15
CPNE3-209ENST00000620393 ACSBG2Q5FVE4 666 aa7.88□□□□□ -1.15
CPNE3-209ENST00000620393 TPRG1LQ5T0D9 272 aa7.88□□□□□ -1.15
CPNE3-209ENST00000620393 PMS2CLQ68D20 193 aa7.88□□□□□ -1.15
CPNE3-209ENST00000620393 C16orf46Q6P387 395 aa7.88□□□□□ -1.15
CPNE3-209ENST00000620393 CRTC3Q6UUV7 619 aa7.88□□□□□ -1.15
CPNE3-209ENST00000620393 NAPRTQ6XQN6 538 aa7.88□□□□□ -1.15
CPNE3-209ENST00000620393 NEK10Q6ZWH5 1172 aa7.88□□□□□ -1.15
CPNE3-209ENST00000620393 ISCA2Q86U28 154 aa7.88□□□□□ -1.15
CPNE3-209ENST00000620393 AMZ2Q86W34 360 aa7.88□□□□□ -1.15
CPNE3-209ENST00000620393 GALNT13Q8IUC8 556 aa7.88□□□□□ -1.15
CPNE3-209ENST00000620393 CPNE9Q8IYJ1 553 aa7.88□□□□□ -1.15
CPNE3-209ENST00000620393 RGL4Q8IZJ4 473 aa7.88□□□□□ -1.15
CPNE3-209ENST00000620393 CENPLQ8N0S6 344 aaPredicted RBP7.88□□□□□ -1.15
CPNE3-209ENST00000620393 SPATA6LQ8N4H0 392 aa7.88□□□□□ -1.15
CPNE3-209ENST00000620393 ARFGAP2Q8N6H7 521 aa7.88□□□□□ -1.15
CPNE3-209ENST00000620393 ZBTB44Q8NCP5 570 aa7.88□□□□□ -1.15
CPNE3-209ENST00000620393 TCP10LQ8TDR4 215 aa7.88□□□□□ -1.15
CPNE3-209ENST00000620393 EEF1AKMT1Q8WVE0 214 aa7.88□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms