RNA–Protein interactions for RNA: ENST00000618999.4

SRGAP3-213, Transcript of SLIT-ROBO Rho GTPase activating protein 3, humanhuman

TSL 5 BASIC

Gene SRGAP3, Length 3,929 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3-213ENST00000618999 GIN1Q9NXP7 522 aa6.91□□□□□ -1.3
SRGAP3-213ENST00000618999 TMEM181Q9P2C4 612 aa6.91□□□□□ -1.3
SRGAP3-213ENST00000618999 VWA7Q9Y334 891 aa6.91□□□□□ -1.3
SRGAP3-213ENST00000618999 TRIM24O15164 1050 aa6.91□□□□□ -1.3
SRGAP3-213ENST00000618999 PDPK1O15530 556 aa6.91□□□□□ -1.3
SRGAP3-213ENST00000618999 ADH1AP07327 375 aa6.91□□□□□ -1.3
SRGAP3-213ENST00000618999 UMPSP11172 480 aa6.91□□□□□ -1.3
SRGAP3-213ENST00000618999 MLLT6P55198 1093 aaPredicted RBP6.91□□□□□ -1.3
SRGAP3-213ENST00000618999 POLD3Q15054 466 aaPredicted RBP6.91□□□□□ -1.3
SRGAP3-213ENST00000618999 PFKFB4Q16877 469 aa6.91□□□□□ -1.3
SRGAP3-213ENST00000618999 LDLRAP1Q5SW96 308 aa6.91□□□□□ -1.3
SRGAP3-213ENST00000618999 DCDC5Q6ZRR9 648 aa6.91□□□□□ -1.3
SRGAP3-213ENST00000618999 TAMM41Q96BW9 452 aa6.91□□□□□ -1.3
SRGAP3-213ENST00000618999 CDC6Q99741 560 aa6.91□□□□□ -1.3
SRGAP3-213ENST00000618999 OLFM1Q99784 485 aa6.91□□□□□ -1.3
SRGAP3-213ENST00000618999 OCSTAMPQ9BR26 566 aa6.91□□□□□ -1.3
SRGAP3-213ENST00000618999 INTS10Q9NVR2 710 aaKnown RBP6.91□□□□□ -1.3
SRGAP3-213ENST00000618999 LEF1Q9UJU2 399 aaPredicted RBP6.91□□□□□ -1.3
SRGAP3-213ENST00000618999 BAG5Q9UL15 447 aa6.91□□□□□ -1.3
SRGAP3-213ENST00000618999 BTRCQ9Y297 605 aa6.91□□□□□ -1.3
SRGAP3-213ENST00000618999 HS3ST4Q9Y661 456 aa6.91□□□□□ -1.3
SRGAP3-213ENST00000618999 LCHNA4D1U4 455 aa6.9□□□□□ -1.3
SRGAP3-213ENST00000618999 CLDN25C9JDP6 229 aa6.9□□□□□ -1.3
SRGAP3-213ENST00000618999 E9PAM4 449 aa6.9□□□□□ -1.3
SRGAP3-213ENST00000618999 RASAL1O95294 804 aa6.9□□□□□ -1.3
SRGAP3-213ENST00000618999 MTHFD1P11586 935 aaKnown RBP6.9□□□□□ -1.3
SRGAP3-213ENST00000618999 ATP4BP51164 291 aa6.9□□□□□ -1.3
SRGAP3-213ENST00000618999 KCNQ1P51787 676 aa6.9□□□□□ -1.3
SRGAP3-213ENST00000618999 LIPEQ05469 1076 aa6.9□□□□□ -1.3
SRGAP3-213ENST00000618999 TRIP4Q15650 581 aaPredicted RBP6.9□□□□□ -1.3
SRGAP3-213ENST00000618999 ANKDD1AQ495B1 522 aa6.9□□□□□ -1.3
SRGAP3-213ENST00000618999 C6orf10Q5SRN2 563 aa6.9□□□□□ -1.3
SRGAP3-213ENST00000618999 HECTD2Q5U5R9 776 aa6.9□□□□□ -1.3
SRGAP3-213ENST00000618999 KIAA0930Q6ICG6 404 aaPredicted RBP6.9□□□□□ -1.3
SRGAP3-213ENST00000618999 DHRS4L2Q6PKH6 230 aa6.9□□□□□ -1.3
SRGAP3-213ENST00000618999 GET4Q7L5D6 327 aaPredicted RBP6.9□□□□□ -1.3
SRGAP3-213ENST00000618999 BNIPLQ7Z465 357 aa6.9□□□□□ -1.3
SRGAP3-213ENST00000618999 ELMOD1Q8N336 334 aa6.9□□□□□ -1.3
SRGAP3-213ENST00000618999 OR52K2Q8NGK3 314 aa6.9□□□□□ -1.3
SRGAP3-213ENST00000618999 ITFG1Q8TB96 612 aa6.9□□□□□ -1.3
SRGAP3-213ENST00000618999 TWIST2Q8WVJ9 160 aa6.9□□□□□ -1.3
SRGAP3-213ENST00000618999 PABPC5Q96DU9 382 aaKnown RBP6.9□□□□□ -1.3
SRGAP3-213ENST00000618999 MAELQ96JY0 434 aaKnown RBP6.9□□□□□ -1.3
SRGAP3-213ENST00000618999 DACH2Q96NX9 599 aa6.9□□□□□ -1.3
SRGAP3-213ENST00000618999 TUBA1CQ9BQE3 449 aa6.9□□□□□ -1.3
SRGAP3-213ENST00000618999 EMILIN2Q9BXX0 1053 aa6.9□□□□□ -1.3
SRGAP3-213ENST00000618999 ARMC7Q9H6L4 198 aa6.9□□□□□ -1.3
SRGAP3-213ENST00000618999 AKTIPQ9H8T0 292 aa6.9□□□□□ -1.3
SRGAP3-213ENST00000618999 GKN1Q9NS71 199 aa6.9□□□□□ -1.3
SRGAP3-213ENST00000618999 COMMD8Q9NX08 183 aa6.9□□□□□ -1.3
SRGAP3-213ENST00000618999 PSME2Q9UL46 239 aa6.9□□□□□ -1.3
SRGAP3-213ENST00000618999 INSL5Q9Y5Q6 135 aa6.9□□□□□ -1.3
SRGAP3-213ENST00000618999 PFDN6O15212 129 aa6.9□□□□□ -1.3
SRGAP3-213ENST00000618999 CLPXO76031 633 aa6.9□□□□□ -1.3
SRGAP3-213ENST00000618999 ABLIM3O94929 683 aa6.9□□□□□ -1.3
SRGAP3-213ENST00000618999 LINC00032P0C843 101 aa6.9□□□□□ -1.3
SRGAP3-213ENST00000618999 CTSAP10619 480 aa6.9□□□□□ -1.3
SRGAP3-213ENST00000618999 MBL2P11226 248 aaPredicted RBP6.9□□□□□ -1.3
SRGAP3-213ENST00000618999 NCK1P16333 377 aa6.9□□□□□ -1.3
SRGAP3-213ENST00000618999 IMPDH1P20839 514 aa6.9□□□□□ -1.3
SRGAP3-213ENST00000618999 HALP42357 657 aa6.9□□□□□ -1.3
SRGAP3-213ENST00000618999 HCAR3P49019 387 aa6.9□□□□□ -1.3
SRGAP3-213ENST00000618999 KPNA1P52294 538 aaPredicted RBP6.9□□□□□ -1.3
SRGAP3-213ENST00000618999 TMBIM6P55061 237 aa6.9□□□□□ -1.3
SRGAP3-213ENST00000618999 GALNT2Q10471 571 aa6.9□□□□□ -1.3
SRGAP3-213ENST00000618999 EPS8Q12929 822 aa6.9□□□□□ -1.3
SRGAP3-213ENST00000618999 NFATC3Q12968 1075 aa6.9□□□□□ -1.3
SRGAP3-213ENST00000618999 MRNIPQ6NTE8 343 aa6.9□□□□□ -1.3
SRGAP3-213ENST00000618999 ZNF773Q6PK81 442 aa6.9□□□□□ -1.3
SRGAP3-213ENST00000618999 CRTC3Q6UUV7 619 aa6.9□□□□□ -1.3
SRGAP3-213ENST00000618999 CHST15Q7LFX5 561 aaPredicted RBP6.9□□□□□ -1.3
SRGAP3-213ENST00000618999 ZNF438Q7Z4V0 828 aa6.9□□□□□ -1.3
SRGAP3-213ENST00000618999 ITIH5Q86UX2 942 aa6.9□□□□□ -1.3
SRGAP3-213ENST00000618999 ZC3H7AQ8IWR0 971 aaKnown RBP6.9□□□□□ -1.3
SRGAP3-213ENST00000618999 LZTR1Q8N653 840 aa6.9□□□□□ -1.3
SRGAP3-213ENST00000618999 TRUB1Q8WWH5 349 aaKnown RBP6.9□□□□□ -1.3
SRGAP3-213ENST00000618999 LRRC58Q96CX6 371 aa6.9□□□□□ -1.3
SRGAP3-213ENST00000618999 BTN2A3PQ96KV6 586 aa6.9□□□□□ -1.3
SRGAP3-213ENST00000618999 RANBP9Q96S59 729 aa6.9□□□□□ -1.3
SRGAP3-213ENST00000618999 C17orf80Q9BSJ5 609 aa6.9□□□□□ -1.3
SRGAP3-213ENST00000618999 C1QTNF1Q9BXJ1 281 aa6.9□□□□□ -1.3
SRGAP3-213ENST00000618999 TRIM54Q9BYV2 358 aa6.9□□□□□ -1.3
SRGAP3-213ENST00000618999 ZNF385DQ9H6B1 395 aa6.9□□□□□ -1.3
SRGAP3-213ENST00000618999 SP110Q9HB58 689 aa6.9□□□□□ -1.3
SRGAP3-213ENST00000618999 RNF112Q9ULX5 631 aa6.9□□□□□ -1.3
SRGAP3-213ENST00000618999 CRYL1Q9Y2S2 319 aa6.9□□□□□ -1.3
SRGAP3-213ENST00000618999 GPC6Q9Y625 555 aaPredicted RBP6.9□□□□□ -1.3
SRGAP3-213ENST00000618999 ZNF840PA6NDX5 716 aa6.9□□□□□ -1.31
SRGAP3-213ENST00000618999 GRXCR1A8MXD5 290 aa6.9□□□□□ -1.31
SRGAP3-213ENST00000618999 PTGES3LE9PB15 166 aa6.9□□□□□ -1.31
SRGAP3-213ENST00000618999 H0Y626 953 aa6.9□□□□□ -1.31
SRGAP3-213ENST00000618999 PIP5K1BO14986 540 aa6.9□□□□□ -1.31
SRGAP3-213ENST00000618999 TRIM16O95361 564 aa6.9□□□□□ -1.31
SRGAP3-213ENST00000618999 IGLV3-25P01717 112 aa6.9□□□□□ -1.31
SRGAP3-213ENST00000618999 CKMP06732 381 aa6.9□□□□□ -1.31
SRGAP3-213ENST00000618999 ALOX5P09917 674 aa6.9□□□□□ -1.31
SRGAP3-213ENST00000618999 CD68P34810 354 aaPredicted RBP6.9□□□□□ -1.31
SRGAP3-213ENST00000618999 SLC11A2P49281 568 aa6.9□□□□□ -1.31
SRGAP3-213ENST00000618999 SERPINH1P50454 418 aaKnown RBP6.9□□□□□ -1.31
SRGAP3-213ENST00000618999 HLCSP50747 726 aa6.9□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms