RNA–Protein interactions for RNA: ENST00000618970.4

PDCD6-213, Transcript of programmed cell death 6, humanhuman

TSL 3 BASIC

Gene PDCD6, Length 931 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD6-213ENST00000618970 CLDN19Q8N6F1 224 aa13.19□□□□□ -0.3
PDCD6-213ENST00000618970 GPBAR1Q8TDU6 330 aa13.19□□□□□ -0.3
PDCD6-213ENST00000618970 LPGAT1Q92604 370 aa13.19□□□□□ -0.3
PDCD6-213ENST00000618970 LINC00615Q96LM1 132 aaPredicted RBP13.19□□□□□ -0.3
PDCD6-213ENST00000618970 BIRC8Q96P09 236 aa13.19□□□□□ -0.3
PDCD6-213ENST00000618970 MCMBPQ9BTE3 642 aa13.19□□□□□ -0.3
PDCD6-213ENST00000618970 FUT8Q9BYC5 575 aa13.19□□□□□ -0.3
PDCD6-213ENST00000618970 TRNAU1APQ9NX07 287 aaKnown RBP13.19□□□□□ -0.3
PDCD6-213ENST00000618970 ZNHIT2Q9UHR6 403 aa13.19□□□□□ -0.3
PDCD6-213ENST00000618970 MOSPD1Q9UJG1 213 aa13.19□□□□□ -0.3
PDCD6-213ENST00000618970 TCRBV9S1A1TA0A576 114 aa13.18□□□□□ -0.3
PDCD6-213ENST00000618970 OR2AG2A6NM03 316 aa13.18□□□□□ -0.3
PDCD6-213ENST00000618970 CXorf49A8MYA2 514 aaPredicted RBP13.18□□□□□ -0.3
PDCD6-213ENST00000618970 HAUS5O94927 633 aa13.18□□□□□ -0.3
PDCD6-213ENST00000618970 AHSGP02765 367 aa13.18□□□□□ -0.3
PDCD6-213ENST00000618970 RPS3P23396 243 aaKnown RBP eCLIP13.18□□□□□ -0.38e-10■■■■□ 20.7
PDCD6-213ENST00000618970 AK4P27144 223 aaPredicted RBP13.18□□□□□ -0.3
PDCD6-213ENST00000618970 SLC1A2P43004 574 aa13.18□□□□□ -0.3
PDCD6-213ENST00000618970 LEPRP48357 1165 aaKnown RBP13.18□□□□□ -0.3
PDCD6-213ENST00000618970 TTPAP49638 278 aa13.18□□□□□ -0.3
PDCD6-213ENST00000618970 PRLHRP49683 370 aa13.18□□□□□ -0.3
PDCD6-213ENST00000618970 BLKP51451 505 aa13.18□□□□□ -0.3
PDCD6-213ENST00000618970 MPP1Q00013 466 aa13.18□□□□□ -0.3
PDCD6-213ENST00000618970 CTBSQ01459 385 aa13.18□□□□□ -0.3
PDCD6-213ENST00000618970 PRRT3Q5FWE3 981 aa13.18□□□□□ -0.3
PDCD6-213ENST00000618970 CTSL3PQ5NE16 218 aa13.18□□□□□ -0.3
PDCD6-213ENST00000618970 HES3Q5TGS1 186 aa13.18□□□□□ -0.3
PDCD6-213ENST00000618970 LYPLAL1Q5VWZ2 237 aa13.18□□□□□ -0.3
PDCD6-213ENST00000618970 MRNIPQ6NTE8 343 aa13.18□□□□□ -0.3
PDCD6-213ENST00000618970 WDR93Q6P2C0 686 aa13.18□□□□□ -0.3
PDCD6-213ENST00000618970 CAPN12Q6ZSI9 719 aa13.18□□□□□ -0.3
PDCD6-213ENST00000618970 DET1Q7L5Y6 550 aa13.18□□□□□ -0.3
PDCD6-213ENST00000618970 LRRTM4Q86VH4 590 aa13.18□□□□□ -0.3
PDCD6-213ENST00000618970 C2CD4AQ8NCU7 369 aaPredicted RBP13.18□□□□□ -0.3
PDCD6-213ENST00000618970 ZNF548Q8NEK5 533 aaPredicted RBP13.18□□□□□ -0.3
PDCD6-213ENST00000618970 HEXDCQ8WVB3 486 aa13.18□□□□□ -0.3
PDCD6-213ENST00000618970 SCG3Q8WXD2 468 aaKnown RBP13.18□□□□□ -0.3
PDCD6-213ENST00000618970 UBXN4Q92575 508 aa13.18□□□□□ -0.3
PDCD6-213ENST00000618970 NXPE2Q96DL1 559 aa13.18□□□□□ -0.3
PDCD6-213ENST00000618970 DCBLD2Q96PD2 775 aa13.18□□□□□ -0.3
PDCD6-213ENST00000618970 OR2M4Q96R27 311 aa13.18□□□□□ -0.3
PDCD6-213ENST00000618970 TCF12Q99081 682 aa13.18□□□□□ -0.3
PDCD6-213ENST00000618970 EPB41L4BQ9H329 900 aa13.18□□□□□ -0.3
PDCD6-213ENST00000618970 FBXO6Q9NRD1 293 aaPredicted RBP13.18□□□□□ -0.3
PDCD6-213ENST00000618970 APOBEC3BQ9UH17 382 aaKnown RBP13.18□□□□□ -0.3
PDCD6-213ENST00000618970 FBXO5Q9UKT4 447 aa13.18□□□□□ -0.3
PDCD6-213ENST00000618970 RAB21Q9UL25 225 aa13.18□□□□□ -0.3
PDCD6-213ENST00000618970 DNMT3AQ9Y6K1 912 aaPredicted RBP13.18□□□□□ -0.3
PDCD6-213ENST00000618970 CSNK1G3Q9Y6M4 447 aa13.18□□□□□ -0.3
PDCD6-213ENST00000618970 ASXL3Q9C0F0 2248 aa13.17□□□□□ -0.3
PDCD6-213ENST00000618970 FAM159BA6NKW6 160 aa13.17□□□□□ -0.3
PDCD6-213ENST00000618970 YY2O15391 372 aa13.17□□□□□ -0.3
PDCD6-213ENST00000618970 AQP9O43315 295 aa13.17□□□□□ -0.3
PDCD6-213ENST00000618970 TLX3O43711 291 aaPredicted RBP13.17□□□□□ -0.3
PDCD6-213ENST00000618970 POP7O75817 140 aaKnown RBP13.17□□□□□ -0.3
PDCD6-213ENST00000618970 PIAS1O75925 651 aa13.17□□□□□ -0.3
PDCD6-213ENST00000618970 AP2A2O94973 939 aa13.17□□□□□ -0.3
PDCD6-213ENST00000618970 JUPP14923 745 aa13.17□□□□□ -0.3
PDCD6-213ENST00000618970 AKT1P31749 480 aa13.17□□□□□ -0.3
PDCD6-213ENST00000618970 CLCNKAP51800 687 aa13.17□□□□□ -0.3
PDCD6-213ENST00000618970 ADARP55265 1226 aaKnown RBP13.17□□□□□ -0.3
PDCD6-213ENST00000618970 TIAL1Q01085 375 aaKnown RBP eCLIP13.17□□□□□ -0.3
PDCD6-213ENST00000618970 TARDBPQ13148 414 aaKnown RBP eCLIP13.17□□□□□ -0.31e-6■■■□□ 15.8
PDCD6-213ENST00000618970 THOC5Q13769 683 aaKnown RBP13.17□□□□□ -0.3
PDCD6-213ENST00000618970 ZNF470Q6ECI4 717 aa13.17□□□□□ -0.3
PDCD6-213ENST00000618970 ZNF549Q6P9A3 640 aa13.17□□□□□ -0.3
PDCD6-213ENST00000618970 ZNF449Q6P9G9 518 aa13.17□□□□□ -0.3
PDCD6-213ENST00000618970 CNSTQ6PJW8 725 aa13.17□□□□□ -0.3
PDCD6-213ENST00000618970 CRTC3Q6UUV7 619 aa13.17□□□□□ -0.3
PDCD6-213ENST00000618970 CHST15Q7LFX5 561 aaPredicted RBP13.17□□□□□ -0.3
PDCD6-213ENST00000618970 GALNT7Q86SF2 657 aa13.17□□□□□ -0.3
PDCD6-213ENST00000618970 SDCCAG8Q86SQ7 713 aaPredicted RBP13.17□□□□□ -0.3
PDCD6-213ENST00000618970 GALNT13Q8IUC8 556 aa13.17□□□□□ -0.3
PDCD6-213ENST00000618970 SPNS2Q8IVW8 549 aa13.17□□□□□ -0.3
PDCD6-213ENST00000618970 SFTPA2Q8IWL1 248 aa13.17□□□□□ -0.3
PDCD6-213ENST00000618970 LKAAEAR1Q8TD35 194 aa13.17□□□□□ -0.3
PDCD6-213ENST00000618970 LMX1AQ8TE12 382 aa13.17□□□□□ -0.3
PDCD6-213ENST00000618970 TBRG4Q969Z0 631 aaKnown RBP eCLIP13.17□□□□□ -0.32e-6■■■■■ 54.9
PDCD6-213ENST00000618970 PARD6BQ9BYG5 372 aa13.17□□□□□ -0.3
PDCD6-213ENST00000618970 SLC13A1Q9BZW2 595 aa13.17□□□□□ -0.3
PDCD6-213ENST00000618970 TSPYL1Q9H0U9 437 aa13.17□□□□□ -0.3
PDCD6-213ENST00000618970 SPATS2LQ9NUQ6 558 aaKnown RBP13.17□□□□□ -0.3
PDCD6-213ENST00000618970 SPASTQ9UBP0 616 aa13.17□□□□□ -0.3
PDCD6-213ENST00000618970 RABGEF1Q9UJ41 708 aa13.17□□□□□ -0.3
PDCD6-213ENST00000618970 MED16Q9Y2X0 877 aa13.17□□□□□ -0.3
PDCD6-213ENST00000618970 PSAT1Q9Y617 370 aa13.17□□□□□ -0.3
PDCD6-213ENST00000618970 RP1P56715 2156 aa13.16□□□□□ -0.3
PDCD6-213ENST00000618970 A6NCN8 305 aa13.16□□□□□ -0.3
PDCD6-213ENST00000618970 IQCF5A8MTL0 148 aa13.16□□□□□ -0.3
PDCD6-213ENST00000618970 LMO7DNF2Z398 122 aa13.16□□□□□ -0.3
PDCD6-213ENST00000618970 H3BM21 787 aa13.16□□□□□ -0.3
PDCD6-213ENST00000618970 PRMT5O14744 637 aaPredicted RBP13.16□□□□□ -0.3
PDCD6-213ENST00000618970 KMOO15229 486 aa13.16□□□□□ -0.3
PDCD6-213ENST00000618970 NDUFS3O75489 264 aa13.16□□□□□ -0.3
PDCD6-213ENST00000618970 EML2O95834 649 aa13.16□□□□□ -0.3
PDCD6-213ENST00000618970 CTSEP14091 401 aa13.16□□□□□ -0.3
PDCD6-213ENST00000618970 ZNF7P17097 686 aaPredicted RBP13.16□□□□□ -0.3
PDCD6-213ENST00000618970 ITPKBP27987 946 aa13.16□□□□□ -0.3
PDCD6-213ENST00000618970 DMPKQ09013 629 aa13.16□□□□□ -0.3
PDCD6-213ENST00000618970 MGAT5Q09328 741 aa13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms