RNA–Protein interactions for RNA: ENST00000618902.1

SHMT1-211, Transcript of serine hydroxymethyltransferase 1, humanhuman

TSL 5 BASIC

Gene SHMT1, Length 378 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT1-211ENST00000618902 EIF2B3Q9NR50 452 aaKnown RBP5.19□□□□□ -1.58
SHMT1-211ENST00000618902 PHPT1Q9NRX4 125 aaPredicted RBP5.19□□□□□ -1.58
SHMT1-211ENST00000618902 UCKL1Q9NWZ5 548 aa5.19□□□□□ -1.58
SHMT1-211ENST00000618902 SYBUQ9NX95 663 aa5.19□□□□□ -1.58
SHMT1-211ENST00000618902 BTBD3Q9Y2F9 522 aa5.19□□□□□ -1.58
SHMT1-211ENST00000618902 TMEM98Q9Y2Y6 226 aa5.19□□□□□ -1.58
SHMT1-211ENST00000618902 PLEKHM1Q9Y4G2 1056 aa5.19□□□□□ -1.58
SHMT1-211ENST00000618902 PIKFYVEQ9Y2I7 2098 aa5.19□□□□□ -1.58
SHMT1-211ENST00000618902 MED19A0JLT2 244 aaPredicted RBP5.18□□□□□ -1.58
SHMT1-211ENST00000618902 TMEM120BA0PK00 339 aa5.18□□□□□ -1.58
SHMT1-211ENST00000618902 CCDC162PA2VCL2 907 aa5.18□□□□□ -1.58
SHMT1-211ENST00000618902 EME2A4GXA9 379 aaPredicted RBP5.18□□□□□ -1.58
SHMT1-211ENST00000618902 OR51F1A6NGY5 319 aa5.18□□□□□ -1.58
SHMT1-211ENST00000618902 OR5K4A6NMS3 321 aa5.18□□□□□ -1.58
SHMT1-211ENST00000618902 ERI2A8K979 691 aaKnown RBP5.18□□□□□ -1.58
SHMT1-211ENST00000618902 AP3B1O00203 1094 aa5.18□□□□□ -1.58
SHMT1-211ENST00000618902 DNALI1O14645 258 aaPredicted RBP5.18□□□□□ -1.58
SHMT1-211ENST00000618902 INPP4BO15327 924 aa5.18□□□□□ -1.58
SHMT1-211ENST00000618902 PSMD3O43242 534 aa5.18□□□□□ -1.58
SHMT1-211ENST00000618902 SGTAO43765 313 aa5.18□□□□□ -1.58
SHMT1-211ENST00000618902 NUDT21O43809 227 aaKnown RBP5.18□□□□□ -1.58
SHMT1-211ENST00000618902 SDC3O75056 442 aa5.18□□□□□ -1.58
SHMT1-211ENST00000618902 DXOO77932 396 aaKnown RBP5.18□□□□□ -1.58
SHMT1-211ENST00000618902 TGDSO95455 350 aa5.18□□□□□ -1.58
SHMT1-211ENST00000618902 TNFP01375 233 aa5.18□□□□□ -1.58
SHMT1-211ENST00000618902 F7P08709 466 aaPredicted RBP5.18□□□□□ -1.58
SHMT1-211ENST00000618902 MYCLP1P12525 358 aaPredicted RBP5.18□□□□□ -1.58
SHMT1-211ENST00000618902 BRAFP15056 766 aa5.18□□□□□ -1.58
SHMT1-211ENST00000618902 JUNDP17535 347 aa5.18□□□□□ -1.58
SHMT1-211ENST00000618902 LPOP22079 712 aaPredicted RBP5.18□□□□□ -1.58
SHMT1-211ENST00000618902 MGAT1P26572 445 aa5.18□□□□□ -1.58
SHMT1-211ENST00000618902 MAGEA4P43358 317 aa5.18□□□□□ -1.58
SHMT1-211ENST00000618902 GPR3P46089 330 aa5.18□□□□□ -1.58
SHMT1-211ENST00000618902 GPR1P46091 355 aa5.18□□□□□ -1.58
SHMT1-211ENST00000618902 ITGA8P53708 1063 aa5.18□□□□□ -1.58
SHMT1-211ENST00000618902 TMPRSS15P98073 1019 aa5.18□□□□□ -1.58
SHMT1-211ENST00000618902 CDK3Q00526 305 aa5.18□□□□□ -1.58
SHMT1-211ENST00000618902 B4GALNT1Q00973 533 aa5.18□□□□□ -1.58
SHMT1-211ENST00000618902 ACVR1Q04771 509 aa5.18□□□□□ -1.58
SHMT1-211ENST00000618902 SQSTM1Q13501 440 aa5.18□□□□□ -1.58
SHMT1-211ENST00000618902 C1orf61Q13536 156 aa5.18□□□□□ -1.58
SHMT1-211ENST00000618902 SEPT6Q14141 434 aa5.18□□□□□ -1.58
SHMT1-211ENST00000618902 CRYMQ14894 314 aa5.18□□□□□ -1.58
SHMT1-211ENST00000618902 RTP5Q14D33 572 aa5.18□□□□□ -1.58
SHMT1-211ENST00000618902 TCEA2Q15560 299 aa5.18□□□□□ -1.58
SHMT1-211ENST00000618902 TAF1AQ15573 450 aaPredicted RBP5.18□□□□□ -1.58
SHMT1-211ENST00000618902 ZRSR2Q15696 482 aaKnown RBP5.18□□□□□ -1.58
SHMT1-211ENST00000618902 DBN1Q16643 649 aa5.18□□□□□ -1.58
SHMT1-211ENST00000618902 KLHL38Q2WGJ6 581 aa5.18□□□□□ -1.58
SHMT1-211ENST00000618902 PROX2Q3B8N5 592 aa5.18□□□□□ -1.58
SHMT1-211ENST00000618902 FNBP1LQ5T0N5 605 aa5.18□□□□□ -1.58
SHMT1-211ENST00000618902 C6orf132Q5T0Z8 1188 aa5.18□□□□□ -1.58
SHMT1-211ENST00000618902 TTC19Q6DKK2 380 aaPredicted RBP5.18□□□□□ -1.58
SHMT1-211ENST00000618902 RAET1GQ6H3X3 334 aa5.18□□□□□ -1.58
SHMT1-211ENST00000618902 LRRC8BQ6P9F7 803 aa5.18□□□□□ -1.58
SHMT1-211ENST00000618902 FAM151BQ6UXP7 276 aa5.18□□□□□ -1.58
SHMT1-211ENST00000618902 CYS1Q717R9 158 aa5.18□□□□□ -1.58
SHMT1-211ENST00000618902 SPATA21Q7Z572 469 aa5.18□□□□□ -1.58
SHMT1-211ENST00000618902 GATAD2AQ86YP4 633 aa5.18□□□□□ -1.58
SHMT1-211ENST00000618902 RBM12BQ8IXT5 1001 aaKnown RBP5.18□□□□□ -1.58
SHMT1-211ENST00000618902 PIANPQ8IYJ0 282 aa5.18□□□□□ -1.58
SHMT1-211ENST00000618902 SLC25A45Q8N413 288 aa5.18□□□□□ -1.58
SHMT1-211ENST00000618902 TEX9Q8N6V9 391 aa5.18□□□□□ -1.58
SHMT1-211ENST00000618902 ARL10Q8N8L6 244 aa5.18□□□□□ -1.58
SHMT1-211ENST00000618902 DCBLD1Q8N8Z6 715 aa5.18□□□□□ -1.58
SHMT1-211ENST00000618902 MCUQ8NE86 351 aa5.18□□□□□ -1.58
SHMT1-211ENST00000618902 OR56A4Q8NGH8 313 aa5.18□□□□□ -1.58
SHMT1-211ENST00000618902 OR13J1Q8NGT2 312 aa5.18□□□□□ -1.58
SHMT1-211ENST00000618902 OR2W6PQ8NHA6 318 aa5.18□□□□□ -1.58
SHMT1-211ENST00000618902 CCL4L1Q8NHW4 92 aa5.18□□□□□ -1.58
SHMT1-211ENST00000618902 BRSK1Q8TDC3 778 aa5.18□□□□□ -1.58
SHMT1-211ENST00000618902 HEXDCQ8WVB3 486 aa5.18□□□□□ -1.58
SHMT1-211ENST00000618902 ZNF514Q96K75 400 aaPredicted RBP5.18□□□□□ -1.58
SHMT1-211ENST00000618902 CNDP2Q96KP4 475 aaKnown RBP5.18□□□□□ -1.58
SHMT1-211ENST00000618902 SIGLEC10Q96LC7 697 aa5.18□□□□□ -1.58
SHMT1-211ENST00000618902 WDR92Q96MX6 357 aa5.18□□□□□ -1.58
SHMT1-211ENST00000618902 CAMK1GQ96NX5 476 aa5.18□□□□□ -1.58
SHMT1-211ENST00000618902 FCRL3Q96P31 734 aaPredicted RBP5.18□□□□□ -1.58
SHMT1-211ENST00000618902 PLEKHG4BQ96PX9 1271 aa5.18□□□□□ -1.58
SHMT1-211ENST00000618902 DEPDC7Q96QD5 511 aa5.18□□□□□ -1.58
SHMT1-211ENST00000618902 SMC6Q96SB8 1091 aa5.18□□□□□ -1.58
SHMT1-211ENST00000618902 ELAC2Q9BQ52 826 aaKnown RBP5.18□□□□□ -1.58
SHMT1-211ENST00000618902 SELENOSQ9BQE4 189 aa5.18□□□□□ -1.58
SHMT1-211ENST00000618902 ZSCAN5AQ9BUG6 496 aa5.18□□□□□ -1.58
SHMT1-211ENST00000618902 SCNM1Q9BWG6 230 aa5.18□□□□□ -1.58
SHMT1-211ENST00000618902 BOCQ9BWV1 1114 aa5.18□□□□□ -1.58
SHMT1-211ENST00000618902 PITPNM3Q9BZ71 974 aa5.18□□□□□ -1.58
SHMT1-211ENST00000618902 MMADHCQ9H3L0 296 aaPredicted RBP5.18□□□□□ -1.58
SHMT1-211ENST00000618902 CDC42EP4Q9H3Q1 356 aaKnown RBP5.18□□□□□ -1.58
SHMT1-211ENST00000618902 FAM83DQ9H4H8 585 aa5.18□□□□□ -1.58
SHMT1-211ENST00000618902 FAM96AQ9H5X1 160 aa5.18□□□□□ -1.58
SHMT1-211ENST00000618902 CHRAC1Q9NRG0 131 aa5.18□□□□□ -1.58
SHMT1-211ENST00000618902 PKD2L2Q9NZM6 624 aa5.18□□□□□ -1.58
SHMT1-211ENST00000618902 MARCH4Q9P2E8 410 aaPredicted RBP5.18□□□□□ -1.58
SHMT1-211ENST00000618902 APOBEC3BQ9UH17 382 aaKnown RBP5.18□□□□□ -1.58
SHMT1-211ENST00000618902 APPL1Q9UKG1 709 aa5.18□□□□□ -1.58
SHMT1-211ENST00000618902 TCAF1Q9Y4C2 921 aa5.18□□□□□ -1.58
SHMT1-211ENST00000618902 USH1CQ9Y6N9 552 aa5.18□□□□□ -1.58
SHMT1-211ENST00000618902 CFAP46Q8IYW2 2715 aa5.18□□□□□ -1.58
SHMT1-211ENST00000618902 FASNP49327 2511 aaKnown RBP5.18□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms