RNA–Protein interactions for RNA: ENST00000618500.4

SNCA-213, Transcript of synuclein alpha, humanhuman

TSL 1 (best) BASIC

Gene SNCA, Length 3,022 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-213ENST00000618500 FAM83DQ9H4H8 585 aa4.45□□□□□ -1.7
SNCA-213ENST00000618500 TFB2MQ9H5Q4 396 aaKnown RBP4.45□□□□□ -1.7
SNCA-213ENST00000618500 KIR3DX1Q9H7L2 352 aa4.45□□□□□ -1.7
SNCA-213ENST00000618500 NOD2Q9HC29 1040 aa4.45□□□□□ -1.7
SNCA-213ENST00000618500 GPATCH2LQ9NWQ4 482 aa4.45□□□□□ -1.7
SNCA-213ENST00000618500 P4HTMQ9NXG6 502 aa4.45□□□□□ -1.7
SNCA-213ENST00000618500 MAN1B1Q9UKM7 699 aa4.45□□□□□ -1.7
SNCA-213ENST00000618500 MEMO1Q9Y316 297 aa4.45□□□□□ -1.7
SNCA-213ENST00000618500 VSTM2BA6NLU5 285 aa4.45□□□□□ -1.7
SNCA-213ENST00000618500 E7EQ34 232 aa4.45□□□□□ -1.7
SNCA-213ENST00000618500 F8VZ95 297 aa4.45□□□□□ -1.7
SNCA-213ENST00000618500 EEF2KO00418 725 aaKnown RBP4.45□□□□□ -1.7
SNCA-213ENST00000618500 DDX3XO00571 662 aaKnown RBP eCLIP4.45□□□□□ -1.7
SNCA-213ENST00000618500 RASSF9O75901 435 aa4.45□□□□□ -1.7
SNCA-213ENST00000618500 KRT3P12035 628 aa4.45□□□□□ -1.7
SNCA-213ENST00000618500 CARSP49589 748 aaKnown RBP4.45□□□□□ -1.7
SNCA-213ENST00000618500 KPNA2P52292 529 aaKnown RBP4.45□□□□□ -1.7
SNCA-213ENST00000618500 YBX1P67809 324 aaKnown RBP4.45□□□□□ -1.7
SNCA-213ENST00000618500 TLE4Q04727 773 aa4.45□□□□□ -1.7
SNCA-213ENST00000618500 PNOCQ13519 176 aa4.45□□□□□ -1.7
SNCA-213ENST00000618500 TCEA2Q15560 299 aa4.45□□□□□ -1.7
SNCA-213ENST00000618500 RPE65Q16518 533 aa4.45□□□□□ -1.7
SNCA-213ENST00000618500 DPYSL2Q16555 572 aa4.45□□□□□ -1.7
SNCA-213ENST00000618500 MAN2A1Q16706 1144 aa4.45□□□□□ -1.7
SNCA-213ENST00000618500 QPCTQ16769 361 aa4.45□□□□□ -1.7
SNCA-213ENST00000618500 CLEC16AQ2KHT3 1053 aa4.45□□□□□ -1.7
SNCA-213ENST00000618500 TUBB8Q3ZCM7 444 aa4.45□□□□□ -1.7
SNCA-213ENST00000618500 CT47A1Q5JQC4 288 aaPredicted RBP4.45□□□□□ -1.7
SNCA-213ENST00000618500 DOK6Q6PKX4 331 aa4.45□□□□□ -1.7
SNCA-213ENST00000618500 LEKR1Q6ZMV7 388 aa4.45□□□□□ -1.7
SNCA-213ENST00000618500 FAM92BQ6ZTR7 304 aa4.45□□□□□ -1.7
SNCA-213ENST00000618500 CYP4V2Q6ZWL3 525 aaPredicted RBP4.45□□□□□ -1.7
SNCA-213ENST00000618500 CHST15Q7LFX5 561 aaPredicted RBP4.45□□□□□ -1.7
SNCA-213ENST00000618500 TMC3Q7Z5M5 1100 aa4.45□□□□□ -1.7
SNCA-213ENST00000618500 TSPAN33Q86UF1 283 aa4.45□□□□□ -1.7
SNCA-213ENST00000618500 SLC38A9Q8NBW4 561 aa4.45□□□□□ -1.7
SNCA-213ENST00000618500 OR1L3Q8NH93 324 aa4.45□□□□□ -1.7
SNCA-213ENST00000618500 GLYATL1Q969I3 302 aa4.45□□□□□ -1.7
SNCA-213ENST00000618500 ARSGQ96EG1 525 aa4.45□□□□□ -1.7
SNCA-213ENST00000618500 ZNF285Q96NJ3 590 aa4.45□□□□□ -1.7
SNCA-213ENST00000618500 AGAP2Q99490 1192 aa4.45□□□□□ -1.7
SNCA-213ENST00000618500 ZCCHC2Q9C0B9 1178 aaKnown RBP4.45□□□□□ -1.7
SNCA-213ENST00000618500 MAGEE1Q9HCI5 957 aa4.45□□□□□ -1.7
SNCA-213ENST00000618500 ACP6Q9NPH0 428 aa4.45□□□□□ -1.7
SNCA-213ENST00000618500 GPN3Q9UHW5 284 aaPredicted RBP4.45□□□□□ -1.7
SNCA-213ENST00000618500 SERTAD3Q9UJW9 196 aa4.45□□□□□ -1.7
SNCA-213ENST00000618500 ACSL5Q9ULC5 683 aa4.45□□□□□ -1.7
SNCA-213ENST00000618500 KCNK6Q9Y257 313 aa4.45□□□□□ -1.7
SNCA-213ENST00000618500 KLK4Q9Y5K2 254 aa4.45□□□□□ -1.7
SNCA-213ENST00000618500 ATP6V1DQ9Y5K8 247 aa4.45□□□□□ -1.7
SNCA-213ENST00000618500 ESPL1Q14674 2120 aa4.44□□□□□ -1.7
SNCA-213ENST00000618500 UBA6A0AVT1 1052 aaPredicted RBP4.44□□□□□ -1.7
SNCA-213ENST00000618500 CCDC66A2RUB6 948 aa4.44□□□□□ -1.7
SNCA-213ENST00000618500 ANKRD62A6NC57 917 aa4.44□□□□□ -1.7
SNCA-213ENST00000618500 ASPDHA6ND91 283 aa4.44□□□□□ -1.7
SNCA-213ENST00000618500 C3orf80F5H4A9 247 aa4.44□□□□□ -1.7
SNCA-213ENST00000618500 PRPSAP2O60256 369 aa4.44□□□□□ -1.7
SNCA-213ENST00000618500 CHRNB2P17787 502 aa4.44□□□□□ -1.7
SNCA-213ENST00000618500 SLC9A1P19634 815 aa4.44□□□□□ -1.7
SNCA-213ENST00000618500 CA5AP35218 305 aa4.44□□□□□ -1.7
SNCA-213ENST00000618500 SERPINB6P35237 376 aa4.44□□□□□ -1.7
SNCA-213ENST00000618500 MMP13P45452 471 aa4.44□□□□□ -1.7
SNCA-213ENST00000618500 CD151P48509 253 aa4.44□□□□□ -1.7
SNCA-213ENST00000618500 SEPHS1P49903 392 aa4.44□□□□□ -1.7
SNCA-213ENST00000618500 FMO1Q01740 532 aa4.44□□□□□ -1.7
SNCA-213ENST00000618500 ERMARDQ5T6L9 678 aa4.44□□□□□ -1.7
SNCA-213ENST00000618500 KLHDC7AQ5VTJ3 777 aa4.44□□□□□ -1.7
SNCA-213ENST00000618500 PLEKHA7Q6IQ23 1121 aa4.44□□□□□ -1.7
SNCA-213ENST00000618500 PACS2Q86VP3 889 aa4.44□□□□□ -1.7
SNCA-213ENST00000618500 ZNF547Q8IVP9 402 aa4.44□□□□□ -1.7
SNCA-213ENST00000618500 NPWQ8N729 165 aa4.44□□□□□ -1.7
SNCA-213ENST00000618500 BEND7Q8N7W2 519 aaPredicted RBP4.44□□□□□ -1.7
SNCA-213ENST00000618500 DDHD1Q8NEL9 900 aa4.44□□□□□ -1.7
SNCA-213ENST00000618500 MYRIPQ8NFW9 859 aa4.44□□□□□ -1.7
SNCA-213ENST00000618500 GPR150Q8NGU9 434 aa4.44□□□□□ -1.7
SNCA-213ENST00000618500 GPT2Q8TD30 523 aa4.44□□□□□ -1.7
SNCA-213ENST00000618500 MAGEB10Q96LZ2 347 aaPredicted RBP4.44□□□□□ -1.7
SNCA-213ENST00000618500 SELENOOQ9BVL4 669 aa4.44□□□□□ -1.7
SNCA-213ENST00000618500 POLR1EQ9GZS1 481 aaKnown RBP4.44□□□□□ -1.7
SNCA-213ENST00000618500 SLC6A20Q9NP91 592 aa4.44□□□□□ -1.7
SNCA-213ENST00000618500 KLC4Q9NSK0 619 aa4.44□□□□□ -1.7
SNCA-213ENST00000618500 MAP10Q9P2G4 905 aa4.44□□□□□ -1.7
SNCA-213ENST00000618500 AP4E1Q9UPM8 1137 aa4.44□□□□□ -1.7
SNCA-213ENST00000618500 FITM1A5D6W6 292 aa4.44□□□□□ -1.7
SNCA-213ENST00000618500 ZNF487B1APH4 448 aa4.44□□□□□ -1.7
SNCA-213ENST00000618500 E9PLN8 166 aa4.44□□□□□ -1.7
SNCA-213ENST00000618500 H3BRJ5 948 aa4.44□□□□□ -1.7
SNCA-213ENST00000618500 KIF1CO43896 1103 aaKnown RBP4.44□□□□□ -1.7
SNCA-213ENST00000618500 BMP10O95393 424 aa4.44□□□□□ -1.7
SNCA-213ENST00000618500 HEXAP06865 529 aa4.44□□□□□ -1.7
SNCA-213ENST00000618500 CYP2A7P20853 494 aa4.44□□□□□ -1.7
SNCA-213ENST00000618500 MSX1P28360 303 aa4.44□□□□□ -1.7
SNCA-213ENST00000618500 PCK1P35558 622 aa4.44□□□□□ -1.7
SNCA-213ENST00000618500 ARL4DP49703 201 aa4.44□□□□□ -1.7
SNCA-213ENST00000618500 TNFSF10P50591 281 aa4.44□□□□□ -1.7
SNCA-213ENST00000618500 SCNN1BP51168 640 aa4.44□□□□□ -1.7
SNCA-213ENST00000618500 DCDP81605 110 aaKnown RBP4.44□□□□□ -1.7
SNCA-213ENST00000618500 ATP11AP98196 1134 aa4.44□□□□□ -1.7
SNCA-213ENST00000618500 TFF3Q07654 80 aa4.44□□□□□ -1.7
SNCA-213ENST00000618500 SLC10A7Q0GE19 358 aa4.44□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms