RNA–Protein interactions for RNA: ENST00000618207.4

CIITA-212, Transcript of class II major histocompatibility complex transactivator, humanhuman

TSL 5 BASIC

Gene CIITA, Length 2,844 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIITA-212ENST00000618207 CERS6Q6ZMG9 384 aa12.22□□□□□ -0.45
CIITA-212ENST00000618207 NECAB2Q7Z6G3 386 aa12.22□□□□□ -0.45
CIITA-212ENST00000618207 AMIGO2Q86SJ2 522 aa12.22□□□□□ -0.45
CIITA-212ENST00000618207 CPXM2Q8N436 756 aa12.22□□□□□ -0.45
CIITA-212ENST00000618207 EMILIN2Q9BXX0 1053 aa12.22□□□□□ -0.45
CIITA-212ENST00000618207 BRD9Q9H8M2 597 aa12.22□□□□□ -0.45
CIITA-212ENST00000618207 ELOVL2Q9NXB9 296 aa12.22□□□□□ -0.45
CIITA-212ENST00000618207 B4GALT6Q9UBX8 382 aa12.22□□□□□ -0.45
CIITA-212ENST00000618207 SLC25A13Q9UJS0 675 aa12.22□□□□□ -0.45
CIITA-212ENST00000618207 NDUFAF1Q9Y375 327 aa12.22□□□□□ -0.45
CIITA-212ENST00000618207 DTNAQ9Y4J8 743 aa12.22□□□□□ -0.45
CIITA-212ENST00000618207 STX16O14662 325 aa12.22□□□□□ -0.45
CIITA-212ENST00000618207 RNASEH1O60930 286 aaKnown RBP12.22□□□□□ -0.45
CIITA-212ENST00000618207 RNASEH2AO75792 299 aaKnown RBP12.22□□□□□ -0.45
CIITA-212ENST00000618207 BCAS2O75934 225 aaPredicted RBP12.22□□□□□ -0.45
CIITA-212ENST00000618207 SMNDC1O75940 238 aaKnown RBP eCLIP12.22□□□□□ -0.45
CIITA-212ENST00000618207 MLYCDO95822 493 aa12.22□□□□□ -0.45
CIITA-212ENST00000618207 UROSP10746 265 aa12.22□□□□□ -0.45
CIITA-212ENST00000618207 NR6A1Q15406 480 aa12.22□□□□□ -0.45
CIITA-212ENST00000618207 NRF1Q16656 503 aa12.22□□□□□ -0.45
CIITA-212ENST00000618207 CDKN3Q16667 212 aa12.22□□□□□ -0.45
CIITA-212ENST00000618207 RABL3Q5HYI8 236 aa12.22□□□□□ -0.45
CIITA-212ENST00000618207 TMEM215Q68D42 235 aa12.22□□□□□ -0.45
CIITA-212ENST00000618207 PDSS2Q86YH6 399 aa12.22□□□□□ -0.45
CIITA-212ENST00000618207 NXPE1Q8N323 547 aa12.22□□□□□ -0.45
CIITA-212ENST00000618207 BEND7Q8N7W2 519 aaPredicted RBP12.22□□□□□ -0.45
CIITA-212ENST00000618207 PPWD1Q96BP3 646 aaKnown RBP12.22□□□□□ -0.45
CIITA-212ENST00000618207 PYCR2Q96C36 320 aa12.22□□□□□ -0.45
CIITA-212ENST00000618207 IL23AQ9NPF7 189 aa12.22□□□□□ -0.45
CIITA-212ENST00000618207 FARSBQ9NSD9 589 aaKnown RBP12.22□□□□□ -0.45
CIITA-212ENST00000618207 EPS15L1Q9UBC2 864 aa12.22□□□□□ -0.45
CIITA-212ENST00000618207 INSL6Q9Y581 213 aa12.22□□□□□ -0.45
CIITA-212ENST00000618207 PCDHB1Q9Y5F3 818 aa12.22□□□□□ -0.45
CIITA-212ENST00000618207 V9GYQ6 96 aa12.22□□□□□ -0.45
CIITA-212ENST00000618207 ZNF839A8K0R7 811 aa12.21□□□□□ -0.45
CIITA-212ENST00000618207 TTC34A8MYJ7 566 aa12.21□□□□□ -0.45
CIITA-212ENST00000618207 RAD51BO15315 384 aa12.21□□□□□ -0.45
CIITA-212ENST00000618207 HMOX2P30519 316 aa12.21□□□□□ -0.45
CIITA-212ENST00000618207 GRIA3P42263 894 aa12.21□□□□□ -0.45
CIITA-212ENST00000618207 CAPRIN2Q6IMN6 1127 aaKnown RBP12.21□□□□□ -0.45
CIITA-212ENST00000618207 IRGCQ6NXR0 463 aa12.21□□□□□ -0.45
CIITA-212ENST00000618207 TXNDC11Q6PKC3 985 aa12.21□□□□□ -0.45
CIITA-212ENST00000618207 USP45Q70EL2 814 aa12.21□□□□□ -0.45
CIITA-212ENST00000618207 ADAMTSL2Q86TH1 951 aa12.21□□□□□ -0.45
CIITA-212ENST00000618207 ZBTB2Q8N680 514 aa12.21□□□□□ -0.45
CIITA-212ENST00000618207 PCYOX1LQ8NBM8 494 aa12.21□□□□□ -0.45
CIITA-212ENST00000618207 SCRN2Q96FV2 425 aa12.21□□□□□ -0.45
CIITA-212ENST00000618207 TMEM74Q96NL1 305 aa12.21□□□□□ -0.45
CIITA-212ENST00000618207 TUBGCP5Q96RT8 1024 aa12.21□□□□□ -0.45
CIITA-212ENST00000618207 SPATA16Q9BXB7 569 aa12.21□□□□□ -0.45
CIITA-212ENST00000618207 FAM126AQ9BYI3 521 aaPredicted RBP12.21□□□□□ -0.45
CIITA-212ENST00000618207 CERS4Q9HA82 394 aa12.21□□□□□ -0.45
CIITA-212ENST00000618207 PRM3Q9NNZ6 103 aa12.21□□□□□ -0.45
CIITA-212ENST00000618207 ZDHHC4Q9NPG8 344 aa12.21□□□□□ -0.45
CIITA-212ENST00000618207 BATF3Q9NR55 127 aa12.21□□□□□ -0.45
CIITA-212ENST00000618207 SUN2Q9UH99 717 aa12.21□□□□□ -0.45
CIITA-212ENST00000618207 AURKCQ9UQB9 309 aa12.21□□□□□ -0.45
CIITA-212ENST00000618207 ZNF510Q9Y2H8 683 aa12.21□□□□□ -0.45
CIITA-212ENST00000618207 SNX13Q9Y5W8 968 aa12.21□□□□□ -0.45
CIITA-212ENST00000618207 SOCS5O75159 536 aa12.21□□□□□ -0.46
CIITA-212ENST00000618207 PSMC3P17980 439 aa12.21□□□□□ -0.46
CIITA-212ENST00000618207 PSMA3P25788 255 aa12.21□□□□□ -0.46
CIITA-212ENST00000618207 RECQLP46063 649 aaPredicted RBP12.21□□□□□ -0.46
CIITA-212ENST00000618207 HMGCS1Q01581 520 aa12.21□□□□□ -0.46
CIITA-212ENST00000618207 ABRAXAS2Q15018 415 aa12.21□□□□□ -0.46
CIITA-212ENST00000618207 PAGE3Q5JUK9 113 aa12.21□□□□□ -0.46
CIITA-212ENST00000618207 SERPINA13PQ6UXR4 307 aa12.21□□□□□ -0.46
CIITA-212ENST00000618207 Q6ZSR9 355 aa12.21□□□□□ -0.46
CIITA-212ENST00000618207 TPRG1Q6ZUI0 275 aa12.21□□□□□ -0.46
CIITA-212ENST00000618207 MILR1Q7Z6M3 343 aa12.21□□□□□ -0.46
CIITA-212ENST00000618207 C12orf76Q8N812 135 aaPredicted RBP12.21□□□□□ -0.46
CIITA-212ENST00000618207 MRPL43Q8N983 215 aaKnown RBP12.21□□□□□ -0.46
CIITA-212ENST00000618207 ICA1LQ8NDH6 482 aa12.21□□□□□ -0.46
CIITA-212ENST00000618207 LRTOMTQ8WZ04 291 aa12.21□□□□□ -0.46
CIITA-212ENST00000618207 IRF7Q92985 503 aa12.21□□□□□ -0.46
CIITA-212ENST00000618207 ASB9Q96DX5 294 aa12.21□□□□□ -0.46
CIITA-212ENST00000618207 ZFP14Q9HCL3 533 aa12.21□□□□□ -0.46
CIITA-212ENST00000618207 USP22Q9UPT9 525 aa12.21□□□□□ -0.46
CIITA-212ENST00000618207 EYSQ5T1H1 3165 aa12.21□□□□□ -0.46
CIITA-212ENST00000618207 ZFC3H1O60293 1989 aaKnown RBP12.21□□□□□ -0.46
CIITA-212ENST00000618207 NME4O00746 187 aa12.2□□□□□ -0.46
CIITA-212ENST00000618207 OR7A17O14581 309 aa12.2□□□□□ -0.46
CIITA-212ENST00000618207 KIAA0355O15063 1070 aa12.2□□□□□ -0.46
CIITA-212ENST00000618207 GRM6O15303 877 aa12.2□□□□□ -0.46
CIITA-212ENST00000618207 TAPBPO15533 448 aa12.2□□□□□ -0.46
CIITA-212ENST00000618207 MOSPD3O75425 235 aa12.2□□□□□ -0.46
CIITA-212ENST00000618207 DGKAP23743 735 aa12.2□□□□□ -0.46
CIITA-212ENST00000618207 KCNK10P57789 538 aa12.2□□□□□ -0.46
CIITA-212ENST00000618207 NFYCQ13952 458 aa12.2□□□□□ -0.46
CIITA-212ENST00000618207 ATP6AP1LQ52LC2 224 aa12.2□□□□□ -0.46
CIITA-212ENST00000618207 CARD16Q5EG05 197 aa12.2□□□□□ -0.46
CIITA-212ENST00000618207 C6orf136Q5SQH8 315 aa12.2□□□□□ -0.46
CIITA-212ENST00000618207 MPP7Q5T2T1 576 aa12.2□□□□□ -0.46
CIITA-212ENST00000618207 RNF220Q5VTB9 566 aa12.2□□□□□ -0.46
CIITA-212ENST00000618207 GRAMD4Q6IC98 578 aa12.2□□□□□ -0.46
CIITA-212ENST00000618207 VOPP1Q96AW1 172 aa12.2□□□□□ -0.46
CIITA-212ENST00000618207 DCUN1D1Q96GG9 259 aa12.2□□□□□ -0.46
CIITA-212ENST00000618207 ZFYVE19Q96K21 471 aa12.2□□□□□ -0.46
CIITA-212ENST00000618207 COPS8Q99627 209 aa12.2□□□□□ -0.46
CIITA-212ENST00000618207 SPHK2Q9NRA0 654 aa12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms