RNA–Protein interactions for RNA: ENST00000617185.4

TP53-222, Transcript of tumor protein p53, human

TSL 1 (best) BASIC

Gene TP53, Length 2,724 nt, Biotype protein coding, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TP53-222	ENST00000617185	SLAMF1	Q13291	335 aa		11.43	□□□□□ -0.58
TP53-222	ENST00000617185	EFR3A	Q14156	821 aa		11.43	□□□□□ -0.58
TP53-222	ENST00000617185	SPATS1	Q496A3	300 aa		11.43	□□□□□ -0.58
TP53-222	ENST00000617185	PM20D1	Q6GTS8	502 aa		11.43	□□□□□ -0.58
TP53-222	ENST00000617185	RPL3L	Q92901	407 aa	Known RBP	11.43	□□□□□ -0.58
TP53-222	ENST00000617185	TBRG4	Q969Z0	631 aa	Known RBP eCLIP	11.43	□□□□□ -0.58	2e-7	■■■■■ 62.8
TP53-222	ENST00000617185	HPDL	Q96IR7	371 aa		11.43	□□□□□ -0.58
TP53-222	ENST00000617185	FEM1A	Q9BSK4	669 aa		11.43	□□□□□ -0.58
TP53-222	ENST00000617185	CCDC32	Q9BV29	185 aa		11.43	□□□□□ -0.58
TP53-222	ENST00000617185	GOLGA2P5	Q9HBQ8	144 aa		11.43	□□□□□ -0.58
TP53-222	ENST00000617185	PRMT7	Q9NVM4	692 aa	Predicted RBP	11.43	□□□□□ -0.58
TP53-222	ENST00000617185	CCDC59	Q9P031	241 aa	Known RBP	11.43	□□□□□ -0.58
TP53-222	ENST00000617185	CNTN6	Q9UQ52	1028 aa		11.43	□□□□□ -0.58
TP53-222	ENST00000617185	SI	P14410	1827 aa		11.42	□□□□□ -0.58
TP53-222	ENST00000617185	TRIP11	Q15643	1979 aa		11.42	□□□□□ -0.58
TP53-222	ENST00000617185	TCRBV5S2	A0A599	114 aa		11.42	□□□□□ -0.58
TP53-222	ENST00000617185	PAH	P00439	452 aa		11.42	□□□□□ -0.58
TP53-222	ENST00000617185	ACADM	P11310	421 aa		11.42	□□□□□ -0.58
TP53-222	ENST00000617185	DBP	Q10586	325 aa	Predicted RBP	11.42	□□□□□ -0.58
TP53-222	ENST00000617185	COX10	Q12887	443 aa		11.42	□□□□□ -0.58
TP53-222	ENST00000617185	GALE	Q14376	348 aa		11.42	□□□□□ -0.58
TP53-222	ENST00000617185	SPANXN2	Q5MJ10	180 aa		11.42	□□□□□ -0.58
TP53-222	ENST00000617185	MINDY1	Q8N5J2	469 aa		11.42	□□□□□ -0.58
TP53-222	ENST00000617185	OR10T2	Q8NGX3	314 aa		11.42	□□□□□ -0.58
TP53-222	ENST00000617185	PPTC7	Q8NI37	304 aa		11.42	□□□□□ -0.58
TP53-222	ENST00000617185	MCOLN3	Q8TDD5	553 aa		11.42	□□□□□ -0.58
TP53-222	ENST00000617185	RBBP8	Q99708	897 aa		11.42	□□□□□ -0.58
TP53-222	ENST00000617185	KATNBL1	Q9H079	304 aa		11.42	□□□□□ -0.58
TP53-222	ENST00000617185	RRAGC	Q9HB90	399 aa		11.42	□□□□□ -0.58
TP53-222	ENST00000617185	STAP1	Q9ULZ2	295 aa		11.42	□□□□□ -0.58
TP53-222	ENST00000617185	ZNF175	Q9Y473	711 aa		11.42	□□□□□ -0.58
TP53-222	ENST00000617185	ATP6AP2	A0A1C7CYW4	349 aa		11.42	□□□□□ -0.58
TP53-222	ENST00000617185		A8MUA0	341 aa		11.42	□□□□□ -0.58
TP53-222	ENST00000617185	ZNF487	B1APH4	448 aa		11.42	□□□□□ -0.58
TP53-222	ENST00000617185	TMEM233	B4DJY2	109 aa		11.42	□□□□□ -0.58
TP53-222	ENST00000617185	UGT2B17	O75795	530 aa		11.42	□□□□□ -0.58
TP53-222	ENST00000617185	METTL18	O95568	372 aa		11.42	□□□□□ -0.58
TP53-222	ENST00000617185	C2	P06681	752 aa		11.42	□□□□□ -0.58
TP53-222	ENST00000617185	MMP3	P08254	477 aa		11.42	□□□□□ -0.58
TP53-222	ENST00000617185	ZNF30	P17039	623 aa		11.42	□□□□□ -0.58
TP53-222	ENST00000617185	PGAM1	P18669	254 aa		11.42	□□□□□ -0.58
TP53-222	ENST00000617185	DDC	P20711	480 aa		11.42	□□□□□ -0.58
TP53-222	ENST00000617185	EVI2B	P34910	448 aa		11.42	□□□□□ -0.58
TP53-222	ENST00000617185	TGFBR1	P36897	503 aa		11.42	□□□□□ -0.58
TP53-222	ENST00000617185	HNF4A	P41235	474 aa		11.42	□□□□□ -0.58
TP53-222	ENST00000617185	UGT2B15	P54855	530 aa		11.42	□□□□□ -0.58
TP53-222	ENST00000617185	POU5F1B	Q06416	359 aa		11.42	□□□□□ -0.58
TP53-222	ENST00000617185	ZNF267	Q14586	743 aa	Predicted RBP	11.42	□□□□□ -0.58
TP53-222	ENST00000617185	TMEM132D	Q14C87	1099 aa		11.42	□□□□□ -0.58
TP53-222	ENST00000617185	RAP1GAP2	Q684P5	730 aa		11.42	□□□□□ -0.58
TP53-222	ENST00000617185	LAIR2	Q6ISS4	152 aa		11.42	□□□□□ -0.58
TP53-222	ENST00000617185	CES5A	Q6NT32	575 aa		11.42	□□□□□ -0.58
TP53-222	ENST00000617185	METTL3	Q86U44	580 aa	Known RBP	11.42	□□□□□ -0.58
TP53-222	ENST00000617185	STK32C	Q86UX6	486 aa		11.42	□□□□□ -0.58
TP53-222	ENST00000617185	FAM35A	Q86V20	835 aa		11.42	□□□□□ -0.58
TP53-222	ENST00000617185	MICU2	Q8IYU8	434 aa		11.42	□□□□□ -0.58
TP53-222	ENST00000617185	TCTE3	Q8IZS6	198 aa		11.42	□□□□□ -0.58
TP53-222	ENST00000617185	PQLC3	Q8N755	202 aa		11.42	□□□□□ -0.58
TP53-222	ENST00000617185	PAF1	Q8N7H5	531 aa		11.42	□□□□□ -0.58
TP53-222	ENST00000617185	OR7D4	Q8NG98	312 aa		11.42	□□□□□ -0.58
TP53-222	ENST00000617185	OR4M2	Q8NGB6	313 aa		11.42	□□□□□ -0.58
TP53-222	ENST00000617185	BLOC1S5	Q8TDH9	187 aa		11.42	□□□□□ -0.58
TP53-222	ENST00000617185	BCL7C	Q8WUZ0	217 aa	Predicted RBP	11.42	□□□□□ -0.58
TP53-222	ENST00000617185	ANKRD49	Q8WVL7	239 aa		11.42	□□□□□ -0.58
TP53-222	ENST00000617185	ZNF566	Q969W8	418 aa		11.42	□□□□□ -0.58
TP53-222	ENST00000617185	TESC	Q96BS2	214 aa		11.42	□□□□□ -0.58
TP53-222	ENST00000617185	NEDD4L	Q96PU5	975 aa		11.42	□□□□□ -0.58
TP53-222	ENST00000617185	USB1	Q9BQ65	265 aa	Known RBP	11.42	□□□□□ -0.58
TP53-222	ENST00000617185	NAT9	Q9BTE0	207 aa		11.42	□□□□□ -0.58
TP53-222	ENST00000617185	ZNF518B	Q9C0D4	1074 aa		11.42	□□□□□ -0.58
TP53-222	ENST00000617185	NXF2	Q9GZY0	626 aa	Known RBP	11.42	□□□□□ -0.58
TP53-222	ENST00000617185	FLRT1	Q9NZU1	646 aa		11.42	□□□□□ -0.58
TP53-222	ENST00000617185	NUFIP1	Q9UHK0	495 aa	Known RBP	11.42	□□□□□ -0.58
TP53-222	ENST00000617185	GMEB2	Q9UKD1	530 aa		11.42	□□□□□ -0.58
TP53-222	ENST00000617185	PCDHGB2	Q9Y5G2	931 aa		11.42	□□□□□ -0.58
TP53-222	ENST00000617185	PEX16	Q9Y5Y5	336 aa		11.42	□□□□□ -0.58
TP53-222	ENST00000617185	OR2B3	O76000	313 aa		11.41	□□□□□ -0.58
TP53-222	ENST00000617185	MICAL2	O94851	1124 aa		11.41	□□□□□ -0.58
TP53-222	ENST00000617185	LRIG2	O94898	1065 aa		11.41	□□□□□ -0.58
TP53-222	ENST00000617185	MT-ND1	P03886	318 aa		11.41	□□□□□ -0.58
TP53-222	ENST00000617185	MTHFD1	P11586	935 aa	Known RBP	11.41	□□□□□ -0.58
TP53-222	ENST00000617185	MLN	P12872	115 aa		11.41	□□□□□ -0.58
TP53-222	ENST00000617185	CYP2B6	P20813	491 aa		11.41	□□□□□ -0.58
TP53-222	ENST00000617185	CYP3A5	P20815	502 aa		11.41	□□□□□ -0.58
TP53-222	ENST00000617185	CSTF2	P33240	577 aa	Known RBP eCLIP	11.41	□□□□□ -0.58
TP53-222	ENST00000617185	GZMK	P49863	264 aa		11.41	□□□□□ -0.58
TP53-222	ENST00000617185	LIMK2	P53671	638 aa		11.41	□□□□□ -0.58
TP53-222	ENST00000617185	CD83	Q01151	205 aa		11.41	□□□□□ -0.58
TP53-222	ENST00000617185	IL1RL1	Q01638	556 aa		11.41	□□□□□ -0.58
TP53-222	ENST00000617185	PTPN11	Q06124	597 aa	Predicted RBP	11.41	□□□□□ -0.58
TP53-222	ENST00000617185	FRG1	Q14331	258 aa	Known RBP	11.41	□□□□□ -0.58
TP53-222	ENST00000617185	NFE2L1	Q14494	772 aa		11.41	□□□□□ -0.58
TP53-222	ENST00000617185	VARS2	Q5ST30	1063 aa	Known RBP	11.41	□□□□□ -0.58
TP53-222	ENST00000617185	FSTL4	Q6MZW2	842 aa		11.41	□□□□□ -0.58
TP53-222	ENST00000617185	C7orf31	Q8N865	590 aa		11.41	□□□□□ -0.58
TP53-222	ENST00000617185	FNDC5	Q8NAU1	212 aa		11.41	□□□□□ -0.58
TP53-222	ENST00000617185	ST13P5	Q8NFI4	369 aa	Predicted RBP	11.41	□□□□□ -0.58
TP53-222	ENST00000617185	MSANTD3	Q96H12	275 aa		11.41	□□□□□ -0.58
TP53-222	ENST00000617185	PPA2	Q9H2U2	334 aa		11.41	□□□□□ -0.58
TP53-222	ENST00000617185	NXF3	Q9H4D5	531 aa	Known RBP	11.41	□□□□□ -0.58

Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms