RNA–Protein interactions for RNA: ENST00000617054.1

NEK3-207, Transcript of NIMA related kinase 3, humanhuman

TSL 5

Gene NEK3, Length 3,256 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-207ENST00000617054 HGH1Q9BTY7 390 aa7.67□□□□□ -1.18
NEK3-207ENST00000617054 S1PR5Q9H228 398 aa7.67□□□□□ -1.18
NEK3-207ENST00000617054 TUBB1Q9H4B7 451 aa7.67□□□□□ -1.18
NEK3-207ENST00000617054 POPDC3Q9HBV1 291 aa7.67□□□□□ -1.18
NEK3-207ENST00000617054 CD248Q9HCU0 757 aa7.67□□□□□ -1.18
NEK3-207ENST00000617054 SDAD1Q9NVU7 687 aaKnown RBP eCLIP7.67□□□□□ -1.18
NEK3-207ENST00000617054 ZDHHC3Q9NYG2 299 aa7.67□□□□□ -1.18
NEK3-207ENST00000617054 SOBPA7XYQ1 873 aa7.67□□□□□ -1.18
NEK3-207ENST00000617054 VGLL3A8MV65 326 aa7.67□□□□□ -1.18
NEK3-207ENST00000617054 PIP5K1BO14986 540 aa7.67□□□□□ -1.18
NEK3-207ENST00000617054 GALK1P51570 392 aa7.67□□□□□ -1.18
NEK3-207ENST00000617054 ATP6V0D1P61421 351 aa7.67□□□□□ -1.18
NEK3-207ENST00000617054 FCHO2Q0JRZ9 810 aa7.67□□□□□ -1.18
NEK3-207ENST00000617054 KLF10Q13118 480 aa7.67□□□□□ -1.18
NEK3-207ENST00000617054 ADAM15Q13444 863 aa7.67□□□□□ -1.18
NEK3-207ENST00000617054 KRT72Q14CN4 511 aa7.67□□□□□ -1.18
NEK3-207ENST00000617054 PROX2Q3B8N5 592 aa7.67□□□□□ -1.18
NEK3-207ENST00000617054 UGT3A2Q3SY77 523 aa7.67□□□□□ -1.18
NEK3-207ENST00000617054 TTC31Q49AM3 519 aaPredicted RBP7.67□□□□□ -1.18
NEK3-207ENST00000617054 RIPOR1Q6ZS17 1223 aa7.67□□□□□ -1.18
NEK3-207ENST00000617054 RAB44Q7Z6P3 723 aaPredicted RBP7.67□□□□□ -1.18
NEK3-207ENST00000617054 MYLK4Q86YV6 388 aaPredicted RBP7.67□□□□□ -1.18
NEK3-207ENST00000617054 CBARPQ8N350 705 aaPredicted RBP7.67□□□□□ -1.18
NEK3-207ENST00000617054 CDYL2Q8N8U2 506 aa7.67□□□□□ -1.18
NEK3-207ENST00000617054 WDR60Q8WVS4 1066 aa7.67□□□□□ -1.18
NEK3-207ENST00000617054 INPP5DQ92835 1189 aa7.67□□□□□ -1.18
NEK3-207ENST00000617054 MCUR1Q96AQ8 359 aa7.67□□□□□ -1.18
NEK3-207ENST00000617054 AP2M1Q96CW1 435 aa7.67□□□□□ -1.18
NEK3-207ENST00000617054 DENND2DQ9H6A0 471 aaPredicted RBP7.67□□□□□ -1.18
NEK3-207ENST00000617054 NOL11Q9H8H0 719 aaKnown RBP7.67□□□□□ -1.18
NEK3-207ENST00000617054 EML4Q9HC35 981 aaKnown RBP7.67□□□□□ -1.18
NEK3-207ENST00000617054 PKD2L2Q9NZM6 624 aa7.67□□□□□ -1.18
NEK3-207ENST00000617054 SERGEFQ9UGK8 458 aa7.67□□□□□ -1.18
NEK3-207ENST00000617054 PPM1HQ9ULR3 514 aa7.67□□□□□ -1.18
NEK3-207ENST00000617054 PCDHB1Q9Y5F3 818 aa7.67□□□□□ -1.18
NEK3-207ENST00000617054 COPG1Q9Y678 874 aaKnown RBP7.67□□□□□ -1.18
NEK3-207ENST00000617054 DNMT3AQ9Y6K1 912 aaPredicted RBP7.67□□□□□ -1.18
NEK3-207ENST00000617054 NUP210Q8TEM1 1887 aaPredicted RBP7.67□□□□□ -1.18
NEK3-207ENST00000617054 PLXNB3Q9ULL4 1909 aa7.67□□□□□ -1.18
NEK3-207ENST00000617054 RGSL1A5PLK6 1076 aa7.67□□□□□ -1.18
NEK3-207ENST00000617054 AGAP14A8MT82 685 aa7.67□□□□□ -1.18
NEK3-207ENST00000617054 SPECC1L-ADORA2AF8WAN1 911 aa7.67□□□□□ -1.18
NEK3-207ENST00000617054 FFAR2O15552 330 aa7.67□□□□□ -1.18
NEK3-207ENST00000617054 CCNT2O60583 730 aaKnown RBP7.67□□□□□ -1.18
NEK3-207ENST00000617054 ATP5HO75947 161 aa7.67□□□□□ -1.18
NEK3-207ENST00000617054 PDE5AO76074 875 aa7.67□□□□□ -1.18
NEK3-207ENST00000617054 OR4F21O95013 312 aa7.67□□□□□ -1.18
NEK3-207ENST00000617054 ATP6V1G2O95670 118 aa7.67□□□□□ -1.18
NEK3-207ENST00000617054 SRPRAP08240 638 aaKnown RBP7.67□□□□□ -1.18
NEK3-207ENST00000617054 ATP1B2P14415 290 aaPredicted RBP7.67□□□□□ -1.18
NEK3-207ENST00000617054 CD72P21854 359 aa7.67□□□□□ -1.18
NEK3-207ENST00000617054 PPARGP37231 505 aaPredicted RBP7.67□□□□□ -1.18
NEK3-207ENST00000617054 MMP12P39900 470 aa7.67□□□□□ -1.18
NEK3-207ENST00000617054 PREPP48147 710 aa7.67□□□□□ -1.18
NEK3-207ENST00000617054 RASSF2P50749 326 aa7.67□□□□□ -1.18
NEK3-207ENST00000617054 CUL3Q13618 768 aa7.67□□□□□ -1.18
NEK3-207ENST00000617054 GRB7Q14451 532 aa7.67□□□□□ -1.18
NEK3-207ENST00000617054 CCDC85BQ15834 202 aaPredicted RBP7.67□□□□□ -1.18
NEK3-207ENST00000617054 GPR33Q49SQ1 333 aa7.67□□□□□ -1.18
NEK3-207ENST00000617054 CHRDL2Q6WN34 429 aa7.67□□□□□ -1.18
NEK3-207ENST00000617054 ACAD11Q709F0 780 aa7.67□□□□□ -1.18
NEK3-207ENST00000617054 SYVN1Q86TM6 617 aa7.67□□□□□ -1.18
NEK3-207ENST00000617054 JAZF1Q86VZ6 243 aa7.67□□□□□ -1.18
NEK3-207ENST00000617054 TDHQ8IZJ6 230 aa7.67□□□□□ -1.18
NEK3-207ENST00000617054 RNF148Q8N7C7 305 aa7.67□□□□□ -1.18
NEK3-207ENST00000617054 SUSD6Q92537 303 aa7.67□□□□□ -1.18
NEK3-207ENST00000617054 PPP2R3CQ969Q6 453 aa7.67□□□□□ -1.18
NEK3-207ENST00000617054 TRMT61BQ9BVS5 477 aaKnown RBP7.67□□□□□ -1.18
NEK3-207ENST00000617054 TMEM245Q9H330 911 aa7.67□□□□□ -1.18
NEK3-207ENST00000617054 CAPN10Q9HC96 672 aa7.67□□□□□ -1.18
NEK3-207ENST00000617054 PRSS16Q9NQE7 514 aa7.67□□□□□ -1.18
NEK3-207ENST00000617054 SPATS2LQ9NUQ6 558 aaKnown RBP7.67□□□□□ -1.18
NEK3-207ENST00000617054 CCDC167Q9P0B6 97 aa7.67□□□□□ -1.18
NEK3-207ENST00000617054 LNPEPQ9UIQ6 1025 aa7.67□□□□□ -1.18
NEK3-207ENST00000617054 CFAP73A6NFT4 308 aa7.66□□□□□ -1.18
NEK3-207ENST00000617054 E2F3O00716 465 aa7.66□□□□□ -1.18
NEK3-207ENST00000617054 TAPBPO15533 448 aa7.66□□□□□ -1.18
NEK3-207ENST00000617054 MGRN1O60291 552 aa7.66□□□□□ -1.18
NEK3-207ENST00000617054 PEX11AO75192 247 aa7.66□□□□□ -1.18
NEK3-207ENST00000617054 RECQL5O94762 991 aaPredicted RBP7.66□□□□□ -1.18
NEK3-207ENST00000617054 CYP2A6P11509 494 aaPredicted RBP7.66□□□□□ -1.18
NEK3-207ENST00000617054 HOXB8P17481 243 aaPredicted RBP7.66□□□□□ -1.18
NEK3-207ENST00000617054 PGM1P36871 562 aa7.66□□□□□ -1.18
NEK3-207ENST00000617054 ATXN3P54252 364 aaPredicted RBP7.66□□□□□ -1.18
NEK3-207ENST00000617054 RAB15P59190 212 aa7.66□□□□□ -1.18
NEK3-207ENST00000617054 ABRQ12979 859 aa7.66□□□□□ -1.18
NEK3-207ENST00000617054 PDGFRLQ15198 375 aa7.66□□□□□ -1.18
NEK3-207ENST00000617054 AAK1Q2M2I8 961 aa7.66□□□□□ -1.18
NEK3-207ENST00000617054 ZXDCQ2QGD7 858 aaPredicted RBP7.66□□□□□ -1.18
NEK3-207ENST00000617054 HABP4Q5JVS0 413 aaKnown RBP7.66□□□□□ -1.18
NEK3-207ENST00000617054 ANKS6Q68DC2 871 aa7.66□□□□□ -1.18
NEK3-207ENST00000617054 KIAA1211LQ6NV74 962 aa7.66□□□□□ -1.18
NEK3-207ENST00000617054 GK5Q6ZS86 529 aa7.66□□□□□ -1.18
NEK3-207ENST00000617054 SNX32Q86XE0 403 aa7.66□□□□□ -1.18
NEK3-207ENST00000617054 MYO1HQ8N1T3 1032 aa7.66□□□□□ -1.18
NEK3-207ENST00000617054 ZNF557Q8N988 423 aaPredicted RBP7.66□□□□□ -1.18
NEK3-207ENST00000617054 EZH1Q92800 747 aaPredicted RBP7.66□□□□□ -1.18
NEK3-207ENST00000617054 CCDC124Q96CT7 223 aaKnown RBP7.66□□□□□ -1.18
NEK3-207ENST00000617054 MTFMTQ96DP5 389 aaKnown RBP7.66□□□□□ -1.18
NEK3-207ENST00000617054 PCTPQ9UKL6 214 aa7.66□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms