RNA–Protein interactions for RNA: ENST00000616395.4

TRAPPC3-209, Transcript of trafficking protein particle complex 3, humanhuman

TSL 3 BASIC

Gene TRAPPC3, Length 1,336 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC3-209ENST00000616395 SEC31AO94979 1220 aaKnown RBP17.34■□□□□ 0.37
TRAPPC3-209ENST00000616395 AMPD1P23109 780 aa17.34■□□□□ 0.37
TRAPPC3-209ENST00000616395 PAPOLAP51003 745 aaKnown RBP17.34■□□□□ 0.37
TRAPPC3-209ENST00000616395 PLTPP55058 493 aa17.34■□□□□ 0.37
TRAPPC3-209ENST00000616395 HHEXQ03014 270 aa17.34■□□□□ 0.37
TRAPPC3-209ENST00000616395 CHAF1BQ13112 559 aa17.34■□□□□ 0.37
TRAPPC3-209ENST00000616395 MMRN1Q13201 1228 aa17.34■□□□□ 0.37
TRAPPC3-209ENST00000616395 DNASE1L3Q13609 305 aa17.34■□□□□ 0.37
TRAPPC3-209ENST00000616395 PARP15Q460N3 678 aa17.34■□□□□ 0.37
TRAPPC3-209ENST00000616395 ALS2CLQ60I27 953 aa17.34■□□□□ 0.37
TRAPPC3-209ENST00000616395 Q8NA96 180 aa17.34■□□□□ 0.37
TRAPPC3-209ENST00000616395 C5orf34Q96MH7 638 aa17.34■□□□□ 0.37
TRAPPC3-209ENST00000616395 CSPG4P5Q96PW8 444 aa17.34■□□□□ 0.37
TRAPPC3-209ENST00000616395 B4GALT6Q9UBX8 382 aa17.34■□□□□ 0.37
TRAPPC3-209ENST00000616395 SLC5A6Q9Y289 635 aa17.34■□□□□ 0.37
TRAPPC3-209ENST00000616395 R3HDM2Q9Y2K5 976 aaKnown RBP17.34■□□□□ 0.37
TRAPPC3-209ENST00000616395 PCDHGA9Q9Y5G4 932 aaKnown RBP17.34■□□□□ 0.37
TRAPPC3-209ENST00000616395 HEY1Q9Y5J3 304 aa17.34■□□□□ 0.37
TRAPPC3-209ENST00000616395 POLQO75417 2590 aa17.34■□□□□ 0.37
TRAPPC3-209ENST00000616395 GOLGA6CA6NDK9 693 aa17.33■□□□□ 0.36
TRAPPC3-209ENST00000616395 GOLGA6BA6NDN3 693 aa17.33■□□□□ 0.36
TRAPPC3-209ENST00000616395 KIAA0754O94854 1291 aa17.33■□□□□ 0.36
TRAPPC3-209ENST00000616395 RECKO95980 971 aa17.33■□□□□ 0.36
TRAPPC3-209ENST00000616395 GOLGA6DP0CG33 693 aa17.33■□□□□ 0.36
TRAPPC3-209ENST00000616395 MX2P20592 715 aa17.33■□□□□ 0.36
TRAPPC3-209ENST00000616395 POLR2LP62875 67 aaKnown RBP17.33■□□□□ 0.36
TRAPPC3-209ENST00000616395 BCL2L1Q07817 233 aa17.33■□□□□ 0.36
TRAPPC3-209ENST00000616395 PDK1Q15118 436 aa17.33■□□□□ 0.36
TRAPPC3-209ENST00000616395 DENND2CQ68D51 928 aa17.33■□□□□ 0.36
TRAPPC3-209ENST00000616395 JMJD6Q6NYC1 403 aaPredicted RBP17.33■□□□□ 0.36
TRAPPC3-209ENST00000616395 CROCCP2Q86T23 111 aa17.33■□□□□ 0.36
TRAPPC3-209ENST00000616395 MREGQ8N565 214 aa17.33■□□□□ 0.36
TRAPPC3-209ENST00000616395 PLD5Q8N7P1 536 aa17.33■□□□□ 0.36
TRAPPC3-209ENST00000616395 TSEN2Q8NCE0 465 aaKnown RBP17.33■□□□□ 0.36
TRAPPC3-209ENST00000616395 SCARF2Q96GP6 870 aaPredicted RBP17.33■□□□□ 0.36
TRAPPC3-209ENST00000616395 ELMO2Q96JJ3 720 aa17.33■□□□□ 0.36
TRAPPC3-209ENST00000616395 FUT8Q9BYC5 575 aa17.33■□□□□ 0.36
TRAPPC3-209ENST00000616395 SLAMF7Q9NQ25 335 aa17.33■□□□□ 0.36
TRAPPC3-209ENST00000616395 GOLGA6AQ9NYA3 693 aa17.33■□□□□ 0.36
TRAPPC3-209ENST00000616395 TMEM98Q9Y2Y6 226 aa17.33■□□□□ 0.36
TRAPPC3-209ENST00000616395 BHMG1C9JSJ3 638 aaPredicted RBP17.32■□□□□ 0.36
TRAPPC3-209ENST00000616395 IFNB1P01574 187 aa17.32■□□□□ 0.36
TRAPPC3-209ENST00000616395 ETV3P41162 512 aa17.32■□□□□ 0.36
TRAPPC3-209ENST00000616395 CSNK1DP48730 415 aa17.32■□□□□ 0.36
TRAPPC3-209ENST00000616395 CCL11P51671 97 aa17.32■□□□□ 0.36
TRAPPC3-209ENST00000616395 NDST2P52849 883 aa17.32■□□□□ 0.36
TRAPPC3-209ENST00000616395 NR6A1Q15406 480 aa17.32■□□□□ 0.36
TRAPPC3-209ENST00000616395 OASLQ15646 514 aaKnown RBP17.32■□□□□ 0.36
TRAPPC3-209ENST00000616395 CNGA3Q16281 694 aa17.32■□□□□ 0.36
TRAPPC3-209ENST00000616395 RAET1GQ6H3X3 334 aa17.32■□□□□ 0.36
TRAPPC3-209ENST00000616395 PPP1R21Q6ZMI0 780 aa17.32■□□□□ 0.36
TRAPPC3-209ENST00000616395 SLC34A3Q8N130 599 aa17.32■□□□□ 0.36
TRAPPC3-209ENST00000616395 CT55Q8WUE5 264 aa17.32■□□□□ 0.36
TRAPPC3-209ENST00000616395 HERPUD2Q9BSE4 406 aa17.32■□□□□ 0.36
TRAPPC3-209ENST00000616395 MFRPQ9BY79 579 aa17.32■□□□□ 0.36
TRAPPC3-209ENST00000616395 ACTL8Q9H568 366 aa17.32■□□□□ 0.36
TRAPPC3-209ENST00000616395 GOLGA6L10A6NI86 522 aa17.31■□□□□ 0.36
TRAPPC3-209ENST00000616395 TRAFD1O14545 582 aaPredicted RBP17.31■□□□□ 0.36
TRAPPC3-209ENST00000616395 PRAMEF11O60813 436 aa17.31■□□□□ 0.36
TRAPPC3-209ENST00000616395 ANKRD34CP0C6C1 535 aa17.31■□□□□ 0.36
TRAPPC3-209ENST00000616395 CCNYL3P0C7X3 344 aa17.31■□□□□ 0.36
TRAPPC3-209ENST00000616395 GARSP41250 739 aaKnown RBP17.31■□□□□ 0.36
TRAPPC3-209ENST00000616395 RPL21P46778 160 aaKnown RBP17.31■□□□□ 0.36
TRAPPC3-209ENST00000616395 SH3BP2P78314 561 aa17.31■□□□□ 0.36
TRAPPC3-209ENST00000616395 PYCR3Q53H96 274 aa17.31■□□□□ 0.36
TRAPPC3-209ENST00000616395 MARK2Q7KZI7 788 aaKnown RBP17.31■□□□□ 0.36
TRAPPC3-209ENST00000616395 HSD11B1LQ7Z5J1 315 aa17.31■□□□□ 0.36
TRAPPC3-209ENST00000616395 RASGRP3Q8IV61 690 aa17.31■□□□□ 0.36
TRAPPC3-209ENST00000616395 LZTR1Q8N653 840 aa17.31■□□□□ 0.36
TRAPPC3-209ENST00000616395 TFB1MQ8WVM0 346 aaKnown RBP17.31■□□□□ 0.36
TRAPPC3-209ENST00000616395 MARVELD3Q96A59 401 aa17.31■□□□□ 0.36
TRAPPC3-209ENST00000616395 C19orf60Q96EN9 201 aa17.31■□□□□ 0.36
TRAPPC3-209ENST00000616395 DTD2Q96FN9 168 aa17.31■□□□□ 0.36
TRAPPC3-209ENST00000616395 NSMCE3Q96MG7 304 aa17.31■□□□□ 0.36
TRAPPC3-209ENST00000616395 OR6C1Q96RD1 312 aa17.31■□□□□ 0.36
TRAPPC3-209ENST00000616395 SP110Q9HB58 689 aa17.31■□□□□ 0.36
TRAPPC3-209ENST00000616395 SARS2Q9NP81 518 aaKnown RBP17.31■□□□□ 0.36
TRAPPC3-209ENST00000616395 OGFRQ9NZT2 677 aa17.31■□□□□ 0.36
TRAPPC3-209ENST00000616395 PAK5Q9P286 719 aa17.31■□□□□ 0.36
TRAPPC3-209ENST00000616395 LNPEPQ9UIQ6 1025 aa17.31■□□□□ 0.36
TRAPPC3-209ENST00000616395 PADI1Q9ULC6 663 aa17.31■□□□□ 0.36
TRAPPC3-209ENST00000616395 APCP25054 2843 aa17.31■□□□□ 0.36
TRAPPC3-209ENST00000616395 ADGRG4Q8IZF6 3080 aa17.3■□□□□ 0.36
TRAPPC3-209ENST00000616395 ARHGAP10A1A4S6 786 aa17.3■□□□□ 0.36
TRAPPC3-209ENST00000616395 ARHGAP42A6NI28 874 aa17.3■□□□□ 0.36
TRAPPC3-209ENST00000616395 ARGFXA6NJG6 315 aa17.3■□□□□ 0.36
TRAPPC3-209ENST00000616395 NFKBIAP25963 317 aa17.3■□□□□ 0.36
TRAPPC3-209ENST00000616395 LEPRP48357 1165 aaKnown RBP17.3■□□□□ 0.36
TRAPPC3-209ENST00000616395 GFERP55789 205 aa17.3■□□□□ 0.36
TRAPPC3-209ENST00000616395 GPS1Q13098 491 aa17.3■□□□□ 0.36
TRAPPC3-209ENST00000616395 MORF4L2Q15014 288 aa17.3■□□□□ 0.36
TRAPPC3-209ENST00000616395 IZUMO3Q5VZ72 239 aa17.3■□□□□ 0.36
TRAPPC3-209ENST00000616395 Q6ZVL8 140 aa17.3■□□□□ 0.36
TRAPPC3-209ENST00000616395 TRIM74Q86UV6 250 aa17.3■□□□□ 0.36
TRAPPC3-209ENST00000616395 ZC3H18Q86VM9 953 aaKnown RBP17.3■□□□□ 0.36
TRAPPC3-209ENST00000616395 GSPT2Q8IYD1 628 aaKnown RBP17.3■□□□□ 0.36
TRAPPC3-209ENST00000616395 THAP4Q8WY91 577 aa17.3■□□□□ 0.36
TRAPPC3-209ENST00000616395 TMEM121Q9BTD3 319 aa17.3■□□□□ 0.36
TRAPPC3-209ENST00000616395 TBC1D10AQ9BXI6 508 aa17.3■□□□□ 0.36
TRAPPC3-209ENST00000616395 ING2Q9H160 280 aa17.3■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms