RNA–Protein interactions for RNA: ENST00000615606.4

CLTCL1-208, Transcript of clathrin heavy chain like 1, humanhuman

TSL 1 (best)

Gene CLTCL1, Length 4,994 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-208ENST00000615606 CASP12Q6UXS9 341 aa9.32□□□□□ -0.92
CLTCL1-208ENST00000615606 ARHGAP36Q6ZRI8 547 aa9.32□□□□□ -0.92
CLTCL1-208ENST00000615606 GKN2Q86XP6 184 aa9.32□□□□□ -0.92
CLTCL1-208ENST00000615606 ADHFE1Q8IWW8 467 aa9.32□□□□□ -0.92
CLTCL1-208ENST00000615606 ZNF786Q8N393 782 aa9.32□□□□□ -0.92
CLTCL1-208ENST00000615606 ST13P5Q8NFI4 369 aaPredicted RBP9.32□□□□□ -0.92
CLTCL1-208ENST00000615606 ZNF607Q96SK3 696 aa9.32□□□□□ -0.92
CLTCL1-208ENST00000615606 EIF2B4Q9UI10 523 aaKnown RBP9.32□□□□□ -0.92
CLTCL1-208ENST00000615606 SLC9A8Q9Y2E8 581 aa9.32□□□□□ -0.92
CLTCL1-208ENST00000615606 MYH4Q9Y623 1939 aa9.32□□□□□ -0.92
CLTCL1-208ENST00000615606 FFAR2O15552 330 aa9.31□□□□□ -0.92
CLTCL1-208ENST00000615606 TSPAN6O43657 245 aa9.31□□□□□ -0.92
CLTCL1-208ENST00000615606 LEFTY1O75610 366 aa9.31□□□□□ -0.92
CLTCL1-208ENST00000615606 POP7O75817 140 aaKnown RBP9.31□□□□□ -0.92
CLTCL1-208ENST00000615606 SERPINI2O75830 405 aa9.31□□□□□ -0.92
CLTCL1-208ENST00000615606 ITGA2P17301 1181 aa9.31□□□□□ -0.92
CLTCL1-208ENST00000615606 VARSP26640 1264 aaKnown RBP9.31□□□□□ -0.92
CLTCL1-208ENST00000615606 KIR3DL1P43629 444 aa9.31□□□□□ -0.92
CLTCL1-208ENST00000615606 MRPS35P82673 323 aaKnown RBP9.31□□□□□ -0.92
CLTCL1-208ENST00000615606 ZBTB6Q15916 424 aa9.31□□□□□ -0.92
CLTCL1-208ENST00000615606 SLC8B1Q6J4K2 584 aa9.31□□□□□ -0.92
CLTCL1-208ENST00000615606 KLHDC10Q6PID8 442 aa9.31□□□□□ -0.92
CLTCL1-208ENST00000615606 ZDHHC24Q6UX98 284 aa9.31□□□□□ -0.92
CLTCL1-208ENST00000615606 DNAJB14Q8TBM8 379 aa9.31□□□□□ -0.92
CLTCL1-208ENST00000615606 KLHDC7BQ96G42 594 aa9.31□□□□□ -0.92
CLTCL1-208ENST00000615606 POLR1BQ9H9Y6 1135 aa9.31□□□□□ -0.92
CLTCL1-208ENST00000615606 USP29Q9HBJ7 922 aa9.31□□□□□ -0.92
CLTCL1-208ENST00000615606 CIDEBQ9UHD4 219 aa9.31□□□□□ -0.92
CLTCL1-208ENST00000615606 TCRBV21S2A2A0A5A6 115 aa9.31□□□□□ -0.92
CLTCL1-208ENST00000615606 B4DGG1 531 aa9.31□□□□□ -0.92
CLTCL1-208ENST00000615606 FAM72CH0Y354 149 aa9.31□□□□□ -0.92
CLTCL1-208ENST00000615606 K7EPI3 171 aa9.31□□□□□ -0.92
CLTCL1-208ENST00000615606 NIPSNAP2O75323 286 aa9.31□□□□□ -0.92
CLTCL1-208ENST00000615606 ANXA4P09525 319 aaPredicted RBP9.31□□□□□ -0.92
CLTCL1-208ENST00000615606 HOXD8P13378 290 aaPredicted RBP9.31□□□□□ -0.92
CLTCL1-208ENST00000615606 VIPR2P41587 438 aa9.31□□□□□ -0.92
CLTCL1-208ENST00000615606 MAPK12P53778 367 aa9.31□□□□□ -0.92
CLTCL1-208ENST00000615606 USP46P62068 366 aa9.31□□□□□ -0.92
CLTCL1-208ENST00000615606 RPS21P63220 83 aaKnown RBP9.31□□□□□ -0.92
CLTCL1-208ENST00000615606 DSC3Q14574 896 aa9.31□□□□□ -0.92
CLTCL1-208ENST00000615606 ARL13AQ5H913 290 aaPredicted RBP9.31□□□□□ -0.92
CLTCL1-208ENST00000615606 FAM72AQ5TYM5 149 aa9.31□□□□□ -0.92
CLTCL1-208ENST00000615606 ARMC3Q5W041 872 aa9.31□□□□□ -0.92
CLTCL1-208ENST00000615606 FAM72DQ6L9T8 149 aa9.31□□□□□ -0.92
CLTCL1-208ENST00000615606 IYDQ6PHW0 289 aa9.31□□□□□ -0.92
CLTCL1-208ENST00000615606 ZNF852Q6ZMS4 543 aa9.31□□□□□ -0.92
CLTCL1-208ENST00000615606 FAM72BQ86X60 149 aa9.31□□□□□ -0.92
CLTCL1-208ENST00000615606 FAM46DQ8NEK8 389 aa9.31□□□□□ -0.92
CLTCL1-208ENST00000615606 UTP15Q8TED0 518 aaKnown RBP9.31□□□□□ -0.92
CLTCL1-208ENST00000615606 PGAP3Q96FM1 320 aaPredicted RBP9.31□□□□□ -0.92
CLTCL1-208ENST00000615606 FAM83CQ9BQN1 747 aa9.31□□□□□ -0.92
CLTCL1-208ENST00000615606 ADAM7Q9H2U9 754 aa9.31□□□□□ -0.92
CLTCL1-208ENST00000615606 PIAS3Q9Y6X2 628 aa9.31□□□□□ -0.92
CLTCL1-208ENST00000615606 TCRBV7S3A2A0A539 114 aa9.31□□□□□ -0.92
CLTCL1-208ENST00000615606 GTPBP1O00178 669 aaKnown RBP9.31□□□□□ -0.92
CLTCL1-208ENST00000615606 TRIM38O00635 465 aa9.31□□□□□ -0.92
CLTCL1-208ENST00000615606 LIN7AO14910 233 aaPredicted RBP9.31□□□□□ -0.92
CLTCL1-208ENST00000615606 DCLK1O15075 740 aa9.31□□□□□ -0.92
CLTCL1-208ENST00000615606 AP2A2O94973 939 aa9.31□□□□□ -0.92
CLTCL1-208ENST00000615606 APOA1P02647 267 aa9.31□□□□□ -0.92
CLTCL1-208ENST00000615606 UBTFL6P0CB48 400 aaPredicted RBP9.31□□□□□ -0.92
CLTCL1-208ENST00000615606 DRD4P21917 467 aa9.31□□□□□ -0.92
CLTCL1-208ENST00000615606 AVPR1BP47901 424 aa9.31□□□□□ -0.92
CLTCL1-208ENST00000615606 CLK1P49759 484 aaKnown RBP9.31□□□□□ -0.92
CLTCL1-208ENST00000615606 C2orf80Q0P641 193 aa9.31□□□□□ -0.92
CLTCL1-208ENST00000615606 CCDC142Q17RM4 750 aa9.31□□□□□ -0.92
CLTCL1-208ENST00000615606 TIGD2Q4W5G0 525 aa9.31□□□□□ -0.92
CLTCL1-208ENST00000615606 SAMD14Q8IZD0 417 aaPredicted RBP9.31□□□□□ -0.92
CLTCL1-208ENST00000615606 ZNF276Q8N554 614 aa9.31□□□□□ -0.92
CLTCL1-208ENST00000615606 OR6Y1Q8NGX8 325 aa9.31□□□□□ -0.92
CLTCL1-208ENST00000615606 BTN2A2Q8WVV5 523 aa9.31□□□□□ -0.92
CLTCL1-208ENST00000615606 CNBD2Q96M20 576 aa9.31□□□□□ -0.92
CLTCL1-208ENST00000615606 MCMBPQ9BTE3 642 aa9.31□□□□□ -0.92
CLTCL1-208ENST00000615606 C9orf16Q9BUW7 83 aa9.31□□□□□ -0.92
CLTCL1-208ENST00000615606 ATP6V1HQ9UI12 483 aa9.31□□□□□ -0.92
CLTCL1-208ENST00000615606 TIMM22Q9Y584 194 aa9.31□□□□□ -0.92
CLTCL1-208ENST00000615606 ENO4A6NNW6 628 aa9.31□□□□□ -0.92
CLTCL1-208ENST00000615606 TK2O00142 265 aa9.31□□□□□ -0.92
CLTCL1-208ENST00000615606 ERN1O75460 977 aaKnown RBP9.31□□□□□ -0.92
CLTCL1-208ENST00000615606 FYNP06241 537 aa9.31□□□□□ -0.92
CLTCL1-208ENST00000615606 PRPS2P11908 318 aa9.31□□□□□ -0.92
CLTCL1-208ENST00000615606 VAV1P15498 845 aa9.31□□□□□ -0.92
CLTCL1-208ENST00000615606 PCYT1AP49585 367 aa9.31□□□□□ -0.92
CLTCL1-208ENST00000615606 CLCNKAP51800 687 aa9.31□□□□□ -0.92
CLTCL1-208ENST00000615606 NRLP54845 237 aa9.31□□□□□ -0.92
CLTCL1-208ENST00000615606 NTHL1P78549 312 aa9.31□□□□□ -0.92
CLTCL1-208ENST00000615606 ZNF460Q14592 562 aa9.31□□□□□ -0.92
CLTCL1-208ENST00000615606 PAQR3Q6TCH7 311 aa9.31□□□□□ -0.92
CLTCL1-208ENST00000615606 DPY19L3Q6ZPD9 716 aa9.31□□□□□ -0.92
CLTCL1-208ENST00000615606 DHDDSQ86SQ9 333 aa9.31□□□□□ -0.92
CLTCL1-208ENST00000615606 SCML4Q8N228 414 aa9.31□□□□□ -0.92
CLTCL1-208ENST00000615606 EXO5Q9H790 373 aa9.31□□□□□ -0.92
CLTCL1-208ENST00000615606 MAGEE1Q9HCI5 957 aa9.31□□□□□ -0.92
CLTCL1-208ENST00000615606 ZDHHC18Q9NUE0 388 aa9.31□□□□□ -0.92
CLTCL1-208ENST00000615606 NLE1Q9NVX2 485 aaPredicted RBP9.31□□□□□ -0.92
CLTCL1-208ENST00000615606 DLGAP2Q9P1A6 1054 aa9.31□□□□□ -0.92
CLTCL1-208ENST00000615606 DUSP12Q9UNI6 340 aa9.31□□□□□ -0.92
CLTCL1-208ENST00000615606 AKAP11Q9UKA4 1901 aa9.3□□□□□ -0.92
CLTCL1-208ENST00000615606 H3BN98 237 aa9.3□□□□□ -0.92
CLTCL1-208ENST00000615606 HIST1H2ABP04908 130 aa9.3□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms