RNA–Protein interactions for RNA: ENST00000615230.4

TNFRSF9-204, Transcript of TNF receptor superfamily member 9, humanhuman

APPRIS P1 TSL 5 BASIC

Gene TNFRSF9, Length 5,970 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF9-204ENST00000615230 SSU72Q9NP77 194 aaKnown RBP9.62□□□□□ -0.87
TNFRSF9-204ENST00000615230 FKBPLQ9UIM3 349 aa9.62□□□□□ -0.87
TNFRSF9-204ENST00000615230 TPRKBQ9Y3C4 175 aa9.62□□□□□ -0.87
TNFRSF9-204ENST00000615230 PCDHGC4Q9Y5F7 938 aa9.62□□□□□ -0.87
TNFRSF9-204ENST00000615230 MYH1P12882 1939 aa9.62□□□□□ -0.87
TNFRSF9-204ENST00000615230 STX11O75558 287 aa9.62□□□□□ -0.87
TNFRSF9-204ENST00000615230 FGFR3P22607 806 aa9.62□□□□□ -0.87
TNFRSF9-204ENST00000615230 RPL4P36578 427 aaKnown RBP9.62□□□□□ -0.87
TNFRSF9-204ENST00000615230 CCNHP51946 323 aaPredicted RBP9.62□□□□□ -0.87
TNFRSF9-204ENST00000615230 ABATP80404 500 aa9.62□□□□□ -0.87
TNFRSF9-204ENST00000615230 MRPL28Q13084 256 aaKnown RBP9.62□□□□□ -0.87
TNFRSF9-204ENST00000615230 SLC13A2Q13183 592 aa9.62□□□□□ -0.87
TNFRSF9-204ENST00000615230 ARHGAP40Q5TG30 622 aa9.62□□□□□ -0.87
TNFRSF9-204ENST00000615230 KLHDC9Q8NEP7 349 aa9.62□□□□□ -0.87
TNFRSF9-204ENST00000615230 RPL10LQ96L21 214 aaKnown RBP9.62□□□□□ -0.87
TNFRSF9-204ENST00000615230 ZNF576Q9H609 170 aa9.62□□□□□ -0.87
TNFRSF9-204ENST00000615230 PIH1D1Q9NWS0 290 aaKnown RBP9.62□□□□□ -0.87
TNFRSF9-204ENST00000615230 USE1Q9NZ43 259 aa9.62□□□□□ -0.87
TNFRSF9-204ENST00000615230 WRAP73Q9P2S5 460 aaPredicted RBP9.62□□□□□ -0.87
TNFRSF9-204ENST00000615230 TAF4O00268 1085 aa9.61□□□□□ -0.87
TNFRSF9-204ENST00000615230 LYPLA1O75608 230 aaPredicted RBP9.61□□□□□ -0.87
TNFRSF9-204ENST00000615230 CFHP08603 1231 aa9.61□□□□□ -0.87
TNFRSF9-204ENST00000615230 PIRTP0C851 137 aa9.61□□□□□ -0.87
TNFRSF9-204ENST00000615230 C4BPBP20851 252 aa9.61□□□□□ -0.87
TNFRSF9-204ENST00000615230 ITPKBP27987 946 aa9.61□□□□□ -0.87
TNFRSF9-204ENST00000615230 PIK3CBP42338 1070 aa9.61□□□□□ -0.87
TNFRSF9-204ENST00000615230 CTSOP43234 321 aaPredicted RBP9.61□□□□□ -0.87
TNFRSF9-204ENST00000615230 TRIP10Q15642 601 aa9.61□□□□□ -0.87
TNFRSF9-204ENST00000615230 HKDC1Q2TB90 917 aa9.61□□□□□ -0.87
TNFRSF9-204ENST00000615230 MINDY4Q4G0A6 757 aa9.61□□□□□ -0.87
TNFRSF9-204ENST00000615230 GCNT6Q5T4J0 391 aa9.61□□□□□ -0.87
TNFRSF9-204ENST00000615230 ANKRD54Q6NXT1 300 aa9.61□□□□□ -0.87
TNFRSF9-204ENST00000615230 TTC33Q6PID6 262 aaPredicted RBP9.61□□□□□ -0.87
TNFRSF9-204ENST00000615230 ARMCX6Q7L4S7 300 aa9.61□□□□□ -0.87
TNFRSF9-204ENST00000615230 RAB43Q86YS6 212 aa9.61□□□□□ -0.87
TNFRSF9-204ENST00000615230 FUKQ8N0W3 1084 aa9.61□□□□□ -0.87
TNFRSF9-204ENST00000615230 BHLHE22Q8NFJ8 381 aaPredicted RBP9.61□□□□□ -0.87
TNFRSF9-204ENST00000615230 GDPD5Q8WTR4 605 aa9.61□□□□□ -0.87
TNFRSF9-204ENST00000615230 SLC2A13Q96QE2 648 aa9.61□□□□□ -0.87
TNFRSF9-204ENST00000615230 ACTL8Q9H568 366 aa9.61□□□□□ -0.87
TNFRSF9-204ENST00000615230 MCCC2Q9HCC0 563 aa9.61□□□□□ -0.87
TNFRSF9-204ENST00000615230 TIAM2Q8IVF5 1701 aa9.61□□□□□ -0.87
TNFRSF9-204ENST00000615230 RFXANKO14593 260 aa9.61□□□□□ -0.87
TNFRSF9-204ENST00000615230 DFNA5O60443 496 aa9.61□□□□□ -0.87
TNFRSF9-204ENST00000615230 EPOP01588 193 aa9.61□□□□□ -0.87
TNFRSF9-204ENST00000615230 ACP5P13686 325 aa9.61□□□□□ -0.87
TNFRSF9-204ENST00000615230 ACADSP16219 412 aa9.61□□□□□ -0.87
TNFRSF9-204ENST00000615230 CLK1P49759 484 aaKnown RBP9.61□□□□□ -0.87
TNFRSF9-204ENST00000615230 TAS2R41P59536 307 aa9.61□□□□□ -0.87
TNFRSF9-204ENST00000615230 TNK2Q07912 1038 aa9.61□□□□□ -0.87
TNFRSF9-204ENST00000615230 PRAMEF14Q5SWL7 426 aa9.61□□□□□ -0.87
TNFRSF9-204ENST00000615230 PRAMEF13Q5VWM6 474 aa9.61□□□□□ -0.87
TNFRSF9-204ENST00000615230 PANX1Q96RD7 426 aa9.61□□□□□ -0.87
TNFRSF9-204ENST00000615230 SMOQ99835 787 aa9.61□□□□□ -0.87
TNFRSF9-204ENST00000615230 SAMD4AQ9UPU9 718 aaKnown RBP9.61□□□□□ -0.87
TNFRSF9-204ENST00000615230 SEC24DO94855 1032 aaPredicted RBP9.61□□□□□ -0.87
TNFRSF9-204ENST00000615230 OAS1P00973 400 aaKnown RBP9.61□□□□□ -0.87
TNFRSF9-204ENST00000615230 MPC1LP0DKB6 136 aa9.61□□□□□ -0.87
TNFRSF9-204ENST00000615230 BLVRAP53004 296 aa9.61□□□□□ -0.87
TNFRSF9-204ENST00000615230 LIMK2P53671 638 aa9.61□□□□□ -0.87
TNFRSF9-204ENST00000615230 SPIN4Q56A73 249 aa9.61□□□□□ -0.87
TNFRSF9-204ENST00000615230 LIN28BQ6ZN17 250 aaKnown RBP eCLIP9.61□□□□□ -0.87
TNFRSF9-204ENST00000615230 ZNF605Q86T29 641 aa9.61□□□□□ -0.87
TNFRSF9-204ENST00000615230 PLXDC1Q8IUK5 500 aa9.61□□□□□ -0.87
TNFRSF9-204ENST00000615230 CPXM2Q8N436 756 aa9.61□□□□□ -0.87
TNFRSF9-204ENST00000615230 TEX47Q8TBZ9 253 aa9.61□□□□□ -0.87
TNFRSF9-204ENST00000615230 NDRG1Q92597 394 aaKnown RBP9.61□□□□□ -0.87
TNFRSF9-204ENST00000615230 ZNF75CPQ92670 426 aaPredicted RBP9.61□□□□□ -0.87
TNFRSF9-204ENST00000615230 MOAP1Q96BY2 351 aa9.61□□□□□ -0.87
TNFRSF9-204ENST00000615230 TSGA13Q96PP4 275 aa9.61□□□□□ -0.87
TNFRSF9-204ENST00000615230 SLC29A3Q9BZD2 475 aa9.61□□□□□ -0.87
TNFRSF9-204ENST00000615230 MAT2BQ9NZL9 334 aa9.61□□□□□ -0.87
TNFRSF9-204ENST00000615230 B4GALT7Q9UBV7 327 aa9.61□□□□□ -0.87
TNFRSF9-204ENST00000615230 AP4S1Q9Y587 144 aa9.61□□□□□ -0.87
TNFRSF9-204ENST00000615230 COPG1Q9Y678 874 aaKnown RBP9.61□□□□□ -0.87
TNFRSF9-204ENST00000615230 DGKBQ9Y6T7 804 aa9.61□□□□□ -0.87
TNFRSF9-204ENST00000615230 GPR89AB7ZAQ6 455 aa9.61□□□□□ -0.87
TNFRSF9-204ENST00000615230 PAPSS2O95340 614 aaPredicted RBP9.61□□□□□ -0.87
TNFRSF9-204ENST00000615230 GPR89BP0CG08 455 aa9.61□□□□□ -0.87
TNFRSF9-204ENST00000615230 PTX3P26022 381 aaPredicted RBP9.61□□□□□ -0.87
TNFRSF9-204ENST00000615230 POU1F1P28069 291 aa9.61□□□□□ -0.87
TNFRSF9-204ENST00000615230 VHLP40337 213 aa9.61□□□□□ -0.87
TNFRSF9-204ENST00000615230 PON2Q15165 354 aa9.61□□□□□ -0.87
TNFRSF9-204ENST00000615230 MACC1Q6ZN28 852 aa9.61□□□□□ -0.87
TNFRSF9-204ENST00000615230 DAW1Q8N136 415 aa9.61□□□□□ -0.87
TNFRSF9-204ENST00000615230 CDYL2Q8N8U2 506 aa9.61□□□□□ -0.87
TNFRSF9-204ENST00000615230 PIWIL2Q8TC59 973 aaKnown RBP9.61□□□□□ -0.87
TNFRSF9-204ENST00000615230 KCNV2Q8TDN2 545 aa9.61□□□□□ -0.87
TNFRSF9-204ENST00000615230 ZBED6CLQ96FA7 236 aaPredicted RBP9.61□□□□□ -0.87
TNFRSF9-204ENST00000615230 C5orf34Q96MH7 638 aa9.61□□□□□ -0.87
TNFRSF9-204ENST00000615230 HOPXQ9BPY8 73 aaPredicted RBP9.61□□□□□ -0.87
TNFRSF9-204ENST00000615230 LMAN1LQ9HAT1 526 aa9.61□□□□□ -0.87
TNFRSF9-204ENST00000615230 SPATA7Q9P0W8 599 aa9.61□□□□□ -0.87
TNFRSF9-204ENST00000615230 DNAJB4Q9UDY4 337 aa9.61□□□□□ -0.87
TNFRSF9-204ENST00000615230 EPHA6Q9UF33 1036 aa9.61□□□□□ -0.87
TNFRSF9-204ENST00000615230 ZNF840PA6NDX5 716 aa9.6□□□□□ -0.87
TNFRSF9-204ENST00000615230 PSMD11O00231 422 aa9.6□□□□□ -0.87
TNFRSF9-204ENST00000615230 MYL12BO14950 172 aa9.6□□□□□ -0.87
TNFRSF9-204ENST00000615230 AXIN1O15169 862 aa9.6□□□□□ -0.87
TNFRSF9-204ENST00000615230 NPHS1O60500 1241 aa9.6□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms