RNA–Protein interactions for RNA: ENST00000615061.4

CBWD3-211, Transcript of COBW domain containing 3, humanhuman

TSL 1 (best)

Gene CBWD3, Length 1,771 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-211ENST00000615061 AGGF1Q8N302 714 aaeCLIP16.39■□□□□ 0.21
CBWD3-211ENST00000615061 RCBTB1Q8NDN9 531 aa16.39■□□□□ 0.21
CBWD3-211ENST00000615061 GPR150Q8NGU9 434 aa16.39■□□□□ 0.21
CBWD3-211ENST00000615061 PEX13Q92968 403 aa16.39■□□□□ 0.21
CBWD3-211ENST00000615061 KIFC1Q9BW19 673 aa16.39■□□□□ 0.21
CBWD3-211ENST00000615061 WWP1Q9H0M0 922 aa16.39■□□□□ 0.21
CBWD3-211ENST00000615061 ASIC3Q9UHC3 531 aa16.39■□□□□ 0.21
CBWD3-211ENST00000615061 PTPRQQ9UMZ3 2332 aa16.39■□□□□ 0.21
CBWD3-211ENST00000615061 GOLGA8KD6RF30 607 aa16.38■□□□□ 0.21
CBWD3-211ENST00000615061 GOLGA8TH3BQL2 631 aa16.38■□□□□ 0.21
CBWD3-211ENST00000615061 AP3B1O00203 1094 aa16.38■□□□□ 0.21
CBWD3-211ENST00000615061 CCKBRP32239 447 aa16.38■□□□□ 0.21
CBWD3-211ENST00000615061 ETF1P62495 437 aaKnown RBP16.38■□□□□ 0.21
CBWD3-211ENST00000615061 SARNPP82979 210 aaKnown RBP16.38■□□□□ 0.21
CBWD3-211ENST00000615061 PTK6Q13882 451 aa16.38■□□□□ 0.21
CBWD3-211ENST00000615061 RPE65Q16518 533 aa16.38■□□□□ 0.21
CBWD3-211ENST00000615061 FASTKD1Q53R41 847 aaKnown RBP16.38■□□□□ 0.21
CBWD3-211ENST00000615061 PHF19Q5T6S3 580 aa16.38■□□□□ 0.21
CBWD3-211ENST00000615061 RNASEH2BQ5TBB1 312 aaKnown RBP16.38■□□□□ 0.21
CBWD3-211ENST00000615061 DUS1LQ6P1R4 473 aaKnown RBP16.38■□□□□ 0.21
CBWD3-211ENST00000615061 JPH3Q8WXH2 748 aaPredicted RBP16.38■□□□□ 0.21
CBWD3-211ENST00000615061 SLCO2A1Q92959 643 aa16.38■□□□□ 0.21
CBWD3-211ENST00000615061 CXorf40BQ96DE9 158 aa16.38■□□□□ 0.21
CBWD3-211ENST00000615061 PRR11Q96HE9 360 aaPredicted RBP16.38■□□□□ 0.21
CBWD3-211ENST00000615061 INSM2Q96T92 566 aaPredicted RBP16.38■□□□□ 0.21
CBWD3-211ENST00000615061 POLR1BQ9H9Y6 1135 aa16.38■□□□□ 0.21
CBWD3-211ENST00000615061 SLC40A1Q9NP59 571 aa16.38■□□□□ 0.21
CBWD3-211ENST00000615061 SOX13Q9UN79 622 aa16.38■□□□□ 0.21
CBWD3-211ENST00000615061 IGHV5-10-1A0A0J9YXX1 117 aa16.38■□□□□ 0.21
CBWD3-211ENST00000615061 CASQ1P31415 396 aa16.38■□□□□ 0.21
CBWD3-211ENST00000615061 HALP42357 657 aa16.38■□□□□ 0.21
CBWD3-211ENST00000615061 NSG1P42857 185 aa16.38■□□□□ 0.21
CBWD3-211ENST00000615061 LSSP48449 732 aa16.38■□□□□ 0.21
CBWD3-211ENST00000615061 GPLD1P80108 840 aa16.38■□□□□ 0.21
CBWD3-211ENST00000615061 GPR18Q14330 331 aa16.38■□□□□ 0.21
CBWD3-211ENST00000615061 ITIH4Q14624 930 aa16.38■□□□□ 0.21
CBWD3-211ENST00000615061 ZNF658BQ4V348 819 aaPredicted RBP16.38■□□□□ 0.21
CBWD3-211ENST00000615061 CASC4Q6P4E1 433 aa16.38■□□□□ 0.21
CBWD3-211ENST00000615061 NAPRTQ6XQN6 538 aa16.38■□□□□ 0.21
CBWD3-211ENST00000615061 TMEM26Q6ZUK4 368 aa16.38■□□□□ 0.21
CBWD3-211ENST00000615061 MCUQ8NE86 351 aa16.38■□□□□ 0.21
CBWD3-211ENST00000615061 HM13Q8TCT9 377 aa16.38■□□□□ 0.21
CBWD3-211ENST00000615061 TBRG4Q969Z0 631 aaKnown RBP eCLIP16.38■□□□□ 0.21
CBWD3-211ENST00000615061 SH3KBP1Q96B97 665 aa16.38■□□□□ 0.21
CBWD3-211ENST00000615061 LIN37Q96GY3 246 aaPredicted RBP16.38■□□□□ 0.21
CBWD3-211ENST00000615061 AHCYL2Q96HN2 611 aaKnown RBP16.38■□□□□ 0.21
CBWD3-211ENST00000615061 TMEM74Q96NL1 305 aa16.38■□□□□ 0.21
CBWD3-211ENST00000615061 ZMYND15Q9H091 742 aa16.38■□□□□ 0.21
CBWD3-211ENST00000615061 CATSPERZQ9NTU4 200 aa16.38■□□□□ 0.21
CBWD3-211ENST00000615061 POT1Q9NUX5 634 aa16.38■□□□□ 0.21
CBWD3-211ENST00000615061 IMP3Q9NV31 184 aaKnown RBP16.38■□□□□ 0.21
CBWD3-211ENST00000615061 IL1RAPL1Q9NZN1 696 aa16.38■□□□□ 0.21
CBWD3-211ENST00000615061 DKK4Q9UBT3 224 aa16.38■□□□□ 0.21
CBWD3-211ENST00000615061 RAXQ9Y2V3 346 aa16.38■□□□□ 0.21
CBWD3-211ENST00000615061 LOC400499M0QZD8 3231 aa16.38■□□□□ 0.21
CBWD3-211ENST00000615061 CCDC187A0A096LP49 1063 aa16.37■□□□□ 0.21
CBWD3-211ENST00000615061 ZW10O43264 779 aa16.37■□□□□ 0.21
CBWD3-211ENST00000615061 TLX3O43711 291 aaPredicted RBP16.37■□□□□ 0.21
CBWD3-211ENST00000615061 VAPBO95292 243 aa16.37■□□□□ 0.21
CBWD3-211ENST00000615061 IVDP26440 423 aa16.37■□□□□ 0.21
CBWD3-211ENST00000615061 PDHA2P29803 388 aa16.37■□□□□ 0.21
CBWD3-211ENST00000615061 PAFAH1B1P43034 410 aa16.37■□□□□ 0.21
CBWD3-211ENST00000615061 MRPS25P82663 173 aaKnown RBP16.37■□□□□ 0.21
CBWD3-211ENST00000615061 C16orf72Q14CZ0 275 aa16.37■□□□□ 0.21
CBWD3-211ENST00000615061 PACS1Q6VY07 963 aa16.37■□□□□ 0.21
CBWD3-211ENST00000615061 RAB11FIP2Q7L804 512 aa16.37■□□□□ 0.21
CBWD3-211ENST00000615061 PPIL6Q8IXY8 311 aa16.37■□□□□ 0.21
CBWD3-211ENST00000615061 OR10G6Q8NH81 332 aa16.37■□□□□ 0.21
CBWD3-211ENST00000615061 WDR36Q8NI36 951 aaKnown RBP16.37■□□□□ 0.21
CBWD3-211ENST00000615061 NCSTNQ92542 709 aa16.37■□□□□ 0.21
CBWD3-211ENST00000615061 GRAMD1AQ96CP6 724 aa16.37■□□□□ 0.21
CBWD3-211ENST00000615061 SGSM3Q96HU1 749 aa16.37■□□□□ 0.21
CBWD3-211ENST00000615061 CCDC74BQ96LY2 380 aa16.37■□□□□ 0.21
CBWD3-211ENST00000615061 RMDN2Q96LZ7 410 aa16.37■□□□□ 0.21
CBWD3-211ENST00000615061 TRIM51Q9BSJ1 452 aa16.37■□□□□ 0.21
CBWD3-211ENST00000615061 CCM2Q9BSQ5 444 aa16.37■□□□□ 0.21
CBWD3-211ENST00000615061 COG4Q9H9E3 785 aa16.37■□□□□ 0.21
CBWD3-211ENST00000615061 MRM3Q9HC36 420 aaKnown RBP16.37■□□□□ 0.21
CBWD3-211ENST00000615061 OGFRQ9NZT2 677 aa16.37■□□□□ 0.21
CBWD3-211ENST00000615061 MGAQ8IWI9 3026 aa16.37■□□□□ 0.21
CBWD3-211ENST00000615061 LILRA5A6NI73 299 aa16.36■□□□□ 0.21
CBWD3-211ENST00000615061 DNALI1O14645 258 aaPredicted RBP16.36■□□□□ 0.21
CBWD3-211ENST00000615061 CD3EAPO15446 510 aaKnown RBP16.36■□□□□ 0.21
CBWD3-211ENST00000615061 TTI1O43156 1089 aa16.36■□□□□ 0.21
CBWD3-211ENST00000615061 DUX1O43812 170 aa16.36■□□□□ 0.21
CBWD3-211ENST00000615061 MLNP12872 115 aa16.36■□□□□ 0.21
CBWD3-211ENST00000615061 TYRP1P17643 537 aa16.36■□□□□ 0.21
CBWD3-211ENST00000615061 ITIH1P19827 911 aa16.36■□□□□ 0.21
CBWD3-211ENST00000615061 MAGEA3P43357 314 aa16.36■□□□□ 0.21
CBWD3-211ENST00000615061 PREPP48147 710 aa16.36■□□□□ 0.21
CBWD3-211ENST00000615061 DR1Q01658 176 aa16.36■□□□□ 0.21
CBWD3-211ENST00000615061 SQSTM1Q13501 440 aa16.36■□□□□ 0.21
CBWD3-211ENST00000615061 JAMLQ86YT9 394 aa16.36■□□□□ 0.21
CBWD3-211ENST00000615061 C12orf66Q96MD2 445 aa16.36■□□□□ 0.21
CBWD3-211ENST00000615061 FCRL3Q96P31 734 aaPredicted RBP16.36■□□□□ 0.21
CBWD3-211ENST00000615061 LDHAL6BQ9BYZ2 381 aaPredicted RBP16.36■□□□□ 0.21
CBWD3-211ENST00000615061 XAB2Q9HCS7 855 aaKnown RBP16.36■□□□□ 0.21
CBWD3-211ENST00000615061 ACSL5Q9ULC5 683 aa16.36■□□□□ 0.21
CBWD3-211ENST00000615061 C17orf113A0A1B0GUU1 675 aa16.36■□□□□ 0.21
CBWD3-211ENST00000615061 SRRM3A6NNA2 597 aaPredicted RBP16.36■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms