RNA–Protein interactions for RNA: ENST00000613758.4

TMEM254-213, Transcript of transmembrane protein 254, humanhuman

TSL 1 (best) BASIC

Gene TMEM254, Length 2,154 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM254-213ENST00000613758 MAP3K13O43283 966 aa13.54□□□□□ -0.24
TMEM254-213ENST00000613758 NUAK1O60285 661 aa13.54□□□□□ -0.24
TMEM254-213ENST00000613758 HOXC4P09017 264 aaPredicted RBP13.54□□□□□ -0.24
TMEM254-213ENST00000613758 GLRBP48167 497 aa13.54□□□□□ -0.24
TMEM254-213ENST00000613758 IRX4P78413 519 aa13.54□□□□□ -0.24
TMEM254-213ENST00000613758 RPL6Q02878 288 aaKnown RBP13.54□□□□□ -0.24
TMEM254-213ENST00000613758 SLC36A4Q6YBV0 504 aa13.54□□□□□ -0.24
TMEM254-213ENST00000613758 GCNT7Q6ZNI0 430 aa13.54□□□□□ -0.24
TMEM254-213ENST00000613758 TRAPPC5Q8IUR0 188 aa13.54□□□□□ -0.24
TMEM254-213ENST00000613758 CADM4Q8NFZ8 388 aa13.54□□□□□ -0.24
TMEM254-213ENST00000613758 SNX19Q92543 992 aa13.54□□□□□ -0.24
TMEM254-213ENST00000613758 ELMO1Q92556 727 aa13.54□□□□□ -0.24
TMEM254-213ENST00000613758 GPR34Q9UPC5 381 aa13.54□□□□□ -0.24
TMEM254-213ENST00000613758 CCDC163A0A0D9SF12 145 aa13.54□□□□□ -0.24
TMEM254-213ENST00000613758 A0A1W2PPC4 97 aa13.54□□□□□ -0.24
TMEM254-213ENST00000613758 KLF11O14901 512 aa13.54□□□□□ -0.24
TMEM254-213ENST00000613758 KPNA5O15131 536 aa13.54□□□□□ -0.24
TMEM254-213ENST00000613758 BIRC5O15392 142 aa13.54□□□□□ -0.24
TMEM254-213ENST00000613758 LILRB5O75023 590 aa13.54□□□□□ -0.24
TMEM254-213ENST00000613758 TSPAN12O95859 305 aa13.54□□□□□ -0.24
TMEM254-213ENST00000613758 CD1DP15813 335 aa13.54□□□□□ -0.24
TMEM254-213ENST00000613758 DGKAP23743 735 aa13.54□□□□□ -0.24
TMEM254-213ENST00000613758 FNTBP49356 437 aa13.54□□□□□ -0.24
TMEM254-213ENST00000613758 PFN3P60673 137 aa13.54□□□□□ -0.24
TMEM254-213ENST00000613758 ACAP2Q15057 778 aa13.54□□□□□ -0.24
TMEM254-213ENST00000613758 TTLL9Q3SXZ7 439 aa13.54□□□□□ -0.24
TMEM254-213ENST00000613758 CCDC153Q494R4 210 aa13.54□□□□□ -0.24
TMEM254-213ENST00000613758 ACSBG2Q5FVE4 666 aa13.54□□□□□ -0.24
TMEM254-213ENST00000613758 KLC3Q6P597 504 aa13.54□□□□□ -0.24
TMEM254-213ENST00000613758 TMEM105Q8N8V8 129 aa13.54□□□□□ -0.24
TMEM254-213ENST00000613758 CCDC63Q8NA47 563 aa13.54□□□□□ -0.24
TMEM254-213ENST00000613758 TMEM145Q8NBT3 493 aa13.54□□□□□ -0.24
TMEM254-213ENST00000613758 CCDC197Q8NCU1 140 aa13.54□□□□□ -0.24
TMEM254-213ENST00000613758 LINGO1Q96FE5 620 aa13.54□□□□□ -0.24
TMEM254-213ENST00000613758 FAM126AQ9BYI3 521 aaPredicted RBP13.54□□□□□ -0.24
TMEM254-213ENST00000613758 DERL2Q9GZP9 239 aa13.54□□□□□ -0.24
TMEM254-213ENST00000613758 TMEM202A6NGA9 273 aa13.53□□□□□ -0.24
TMEM254-213ENST00000613758 CHUKO15111 745 aa13.53□□□□□ -0.24
TMEM254-213ENST00000613758 RGS4P49798 205 aa13.53□□□□□ -0.24
TMEM254-213ENST00000613758 KPNA2P52292 529 aaKnown RBP13.53□□□□□ -0.24
TMEM254-213ENST00000613758 KIAA1024LP59773 190 aa13.53□□□□□ -0.24
TMEM254-213ENST00000613758 CSTF1Q05048 431 aaKnown RBP13.53□□□□□ -0.24
TMEM254-213ENST00000613758 PCLAFQ15004 111 aa13.53□□□□□ -0.24
TMEM254-213ENST00000613758 LRRC8EQ6NSJ5 796 aa13.53□□□□□ -0.24
TMEM254-213ENST00000613758 CRTC3Q6UUV7 619 aa13.53□□□□□ -0.24
TMEM254-213ENST00000613758 SPATA21Q7Z572 469 aa13.53□□□□□ -0.24
TMEM254-213ENST00000613758 ZNF547Q8IVP9 402 aa13.53□□□□□ -0.24
TMEM254-213ENST00000613758 C1orf210Q8IVY1 113 aa13.53□□□□□ -0.24
TMEM254-213ENST00000613758 FSTL5Q8N475 847 aaPredicted RBP13.53□□□□□ -0.24
TMEM254-213ENST00000613758 GRAMD1AQ96CP6 724 aa13.53□□□□□ -0.24
TMEM254-213ENST00000613758 PDLIM5Q96HC4 596 aaKnown RBP13.53□□□□□ -0.24
TMEM254-213ENST00000613758 PRKAB1Q9Y478 270 aa13.53□□□□□ -0.24
TMEM254-213ENST00000613758 GPR89AB7ZAQ6 455 aa13.52□□□□□ -0.24
TMEM254-213ENST00000613758 ZBTB14O43829 449 aa13.52□□□□□ -0.24
TMEM254-213ENST00000613758 POP7O75817 140 aaKnown RBP13.52□□□□□ -0.24
TMEM254-213ENST00000613758 APOA4P06727 396 aa13.52□□□□□ -0.24
TMEM254-213ENST00000613758 CEACAM5P06731 702 aa13.52□□□□□ -0.24
TMEM254-213ENST00000613758 GPR89BP0CG08 455 aa13.52□□□□□ -0.24
TMEM254-213ENST00000613758 CBSLP0DN79 551 aa13.52□□□□□ -0.24
TMEM254-213ENST00000613758 TDGF1P13385 188 aa13.52□□□□□ -0.24
TMEM254-213ENST00000613758 TFEBP19484 476 aa13.52□□□□□ -0.24
TMEM254-213ENST00000613758 BCKDHBP21953 392 aa13.52□□□□□ -0.24
TMEM254-213ENST00000613758 PBLDP30039 288 aaPredicted RBP13.52□□□□□ -0.24
TMEM254-213ENST00000613758 ALDH3A1P30838 453 aa13.52□□□□□ -0.24
TMEM254-213ENST00000613758 CBSP35520 551 aa13.52□□□□□ -0.24
TMEM254-213ENST00000613758 ATP6V0D1P61421 351 aa13.52□□□□□ -0.24
TMEM254-213ENST00000613758 YPEL5P62699 121 aa13.52□□□□□ -0.24
TMEM254-213ENST00000613758 HSPA14Q0VDF9 509 aa13.52□□□□□ -0.24
TMEM254-213ENST00000613758 BOP1Q14137 746 aaKnown RBP13.52□□□□□ -0.24
TMEM254-213ENST00000613758 PLEKHS1Q5SXH7 462 aa13.52□□□□□ -0.24
TMEM254-213ENST00000613758 ISCA2Q86U28 154 aa13.52□□□□□ -0.24
TMEM254-213ENST00000613758 LRRTM4Q86VH4 590 aa13.52□□□□□ -0.24
TMEM254-213ENST00000613758 NUDCD3Q8IVD9 361 aa13.52□□□□□ -0.24
TMEM254-213ENST00000613758 TMEM151AQ8N4L1 468 aa13.52□□□□□ -0.24
TMEM254-213ENST00000613758 LINC00615Q96LM1 132 aaPredicted RBP13.52□□□□□ -0.24
TMEM254-213ENST00000613758 MRPL57Q9BQC6 102 aaKnown RBP13.52□□□□□ -0.24
TMEM254-213ENST00000613758 ORAI3Q9BRQ5 295 aa13.52□□□□□ -0.24
TMEM254-213ENST00000613758 ZNHIT2Q9UHR6 403 aa13.52□□□□□ -0.24
TMEM254-213ENST00000613758 TSR3Q9UJK0 312 aaKnown RBP13.52□□□□□ -0.24
TMEM254-213ENST00000613758 SLC17A4Q9Y2C5 497 aa13.52□□□□□ -0.24
TMEM254-213ENST00000613758 PCYT1BQ9Y5K3 369 aaPredicted RBP13.52□□□□□ -0.24
TMEM254-213ENST00000613758 PIKFYVEQ9Y2I7 2098 aa13.52□□□□□ -0.24
TMEM254-213ENST00000613758 TOR1BO14657 336 aa13.52□□□□□ -0.25
TMEM254-213ENST00000613758 GRID2O43424 1007 aa13.52□□□□□ -0.25
TMEM254-213ENST00000613758 FUCA1P04066 466 aa13.52□□□□□ -0.25
TMEM254-213ENST00000613758 RBP1P09455 135 aa13.52□□□□□ -0.25
TMEM254-213ENST00000613758 CD27P26842 260 aa13.52□□□□□ -0.25
TMEM254-213ENST00000613758 NFATC4Q14934 902 aa13.52□□□□□ -0.25
TMEM254-213ENST00000613758 Q6ZSR6 202 aa13.52□□□□□ -0.25
TMEM254-213ENST00000613758 ABI3BPQ7Z7G0 1075 aa13.52□□□□□ -0.25
TMEM254-213ENST00000613758 WDR5BQ86VZ2 330 aa13.52□□□□□ -0.25
TMEM254-213ENST00000613758 MAML2Q8IZL2 1156 aaPredicted RBP13.52□□□□□ -0.25
TMEM254-213ENST00000613758 DTWD2Q8NBA8 298 aa13.52□□□□□ -0.25
TMEM254-213ENST00000613758 ASZ1Q8WWH4 475 aa13.52□□□□□ -0.25
TMEM254-213ENST00000613758 ALG9Q9H6U8 611 aa13.52□□□□□ -0.25
TMEM254-213ENST00000613758 CPSF2Q9P2I0 782 aaKnown RBP13.52□□□□□ -0.25
TMEM254-213ENST00000613758 FAM8A1Q9UBU6 413 aa13.52□□□□□ -0.25
TMEM254-213ENST00000613758 NCOR1O75376 2440 aa13.52□□□□□ -0.25
TMEM254-213ENST00000613758 CACNA1IQ9P0X4 2223 aa13.51□□□□□ -0.25
TMEM254-213ENST00000613758 GPC4O75487 556 aa13.51□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms