RNA–Protein interactions for RNA: ENST00000613459.4

HMGXB3-206, Transcript of HMG-box containing 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene HMGXB3, Length 5,567 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3-206ENST00000613459 GNA12Q03113 381 aa17.22■□□□□ 0.35
HMGXB3-206ENST00000613459 UBR7Q8N806 425 aa17.22■□□□□ 0.35
HMGXB3-206ENST00000613459 TTYH1Q9H313 450 aaPredicted RBP17.22■□□□□ 0.35
HMGXB3-206ENST00000613459 FAM83DQ9H4H8 585 aa17.22■□□□□ 0.35
HMGXB3-206ENST00000613459 DENND2DQ9H6A0 471 aaPredicted RBP17.22■□□□□ 0.35
HMGXB3-206ENST00000613459 CXorf21Q9HAI6 301 aa17.22■□□□□ 0.35
HMGXB3-206ENST00000613459 ARHGEF4Q9NR80 690 aa17.22■□□□□ 0.35
HMGXB3-206ENST00000613459 IMP3Q9NV31 184 aaKnown RBP17.22■□□□□ 0.35
HMGXB3-206ENST00000613459 DEC1Q9P2X7 70 aa17.22■□□□□ 0.35
HMGXB3-206ENST00000613459 ZNF282Q9UDV7 671 aaPredicted RBP17.22■□□□□ 0.35
HMGXB3-206ENST00000613459 WTIPA6NIX2 430 aaPredicted RBP17.21■□□□□ 0.35
HMGXB3-206ENST00000613459 ORC5O43913 435 aa17.21■□□□□ 0.35
HMGXB3-206ENST00000613459 GATBO75879 557 aaKnown RBP17.21■□□□□ 0.35
HMGXB3-206ENST00000613459 SRPRAP08240 638 aaKnown RBP17.21■□□□□ 0.35
HMGXB3-206ENST00000613459 OR1D2P34982 312 aa17.21■□□□□ 0.35
HMGXB3-206ENST00000613459 CA9Q16790 459 aa17.21■□□□□ 0.35
HMGXB3-206ENST00000613459 RUVBL1Q9Y265 456 aaKnown RBP17.21■□□□□ 0.35
HMGXB3-206ENST00000613459 PMF1-BGLAPU3KQ54 211 aa17.21■□□□□ 0.35
HMGXB3-206ENST00000613459 CXCL14O95715 111 aa17.21■□□□□ 0.35
HMGXB3-206ENST00000613459 PRKAR2AP13861 404 aaKnown RBP17.21■□□□□ 0.35
HMGXB3-206ENST00000613459 STXBP1P61764 594 aaKnown RBP17.21■□□□□ 0.35
HMGXB3-206ENST00000613459 PPP2R2BQ00005 443 aa17.21■□□□□ 0.35
HMGXB3-206ENST00000613459 TAF1AQ15573 450 aaPredicted RBP17.21■□□□□ 0.35
HMGXB3-206ENST00000613459 CYP1B1Q16678 543 aa17.21■□□□□ 0.35
HMGXB3-206ENST00000613459 IFI44LQ53G44 452 aa17.21■□□□□ 0.35
HMGXB3-206ENST00000613459 KLHL22Q53GT1 634 aa17.21■□□□□ 0.35
HMGXB3-206ENST00000613459 UTS2BQ765I0 119 aa17.21■□□□□ 0.35
HMGXB3-206ENST00000613459 OTOP3Q7RTS5 596 aa17.21■□□□□ 0.35
HMGXB3-206ENST00000613459 CERS5Q8N5B7 392 aa17.21■□□□□ 0.35
HMGXB3-206ENST00000613459 OR10G6Q8NH81 332 aa17.21■□□□□ 0.35
HMGXB3-206ENST00000613459 YTHDF1Q9BYJ9 559 aaKnown RBP17.21■□□□□ 0.35
HMGXB3-206ENST00000613459 PDZD7Q9H5P4 517 aa17.21■□□□□ 0.35
HMGXB3-206ENST00000613459 PDE10AQ9Y233 779 aa17.21■□□□□ 0.35
HMGXB3-206ENST00000613459 PCDHGA10Q9Y5H3 936 aa17.21■□□□□ 0.35
HMGXB3-206ENST00000613459 U3KQV3 271 aa17.21■□□□□ 0.35
HMGXB3-206ENST00000613459 INSIG1O15503 277 aa17.21■□□□□ 0.35
HMGXB3-206ENST00000613459 NOL4O94818 638 aa17.21■□□□□ 0.35
HMGXB3-206ENST00000613459 CDK14O94921 469 aa17.21■□□□□ 0.35
HMGXB3-206ENST00000613459 APOC1P02654 83 aa17.21■□□□□ 0.35
HMGXB3-206ENST00000613459 RPLP0P05388 317 aaKnown RBP17.21■□□□□ 0.35
HMGXB3-206ENST00000613459 ITPKBP27987 946 aa17.21■□□□□ 0.35
HMGXB3-206ENST00000613459 SLC5A3P53794 718 aa17.21■□□□□ 0.35
HMGXB3-206ENST00000613459 HEPACAMQ14CZ8 416 aa17.21■□□□□ 0.35
HMGXB3-206ENST00000613459 ZBTB6Q15916 424 aa17.21■□□□□ 0.35
HMGXB3-206ENST00000613459 FAAH2Q6GMR7 532 aa17.21■□□□□ 0.35
HMGXB3-206ENST00000613459 SNX20Q7Z614 316 aa17.21■□□□□ 0.35
HMGXB3-206ENST00000613459 ACOT12Q8WYK0 555 aa17.21■□□□□ 0.35
HMGXB3-206ENST00000613459 EHD1Q9H4M9 534 aa17.21■□□□□ 0.35
HMGXB3-206ENST00000613459 FNIP2Q9P278 1114 aa17.21■□□□□ 0.35
HMGXB3-206ENST00000613459 HEBP2Q9Y5Z4 205 aa17.21■□□□□ 0.35
HMGXB3-206ENST00000613459 GSTT2BP0CG30 244 aa17.21■□□□□ 0.35
HMGXB3-206ENST00000613459 SAGP10523 405 aaPredicted RBP17.21■□□□□ 0.35
HMGXB3-206ENST00000613459 SCNN1AP37088 669 aa17.21■□□□□ 0.35
HMGXB3-206ENST00000613459 PITPNAQ00169 270 aa17.21■□□□□ 0.35
HMGXB3-206ENST00000613459 GPATCH1Q9BRR8 931 aaKnown RBP17.21■□□□□ 0.35
HMGXB3-206ENST00000613459 ABCB9Q9NP78 766 aa17.21■□□□□ 0.35
HMGXB3-206ENST00000613459 CD320Q9NPF0 282 aa17.21■□□□□ 0.35
HMGXB3-206ENST00000613459 MGAT4AQ9UM21 535 aa17.21■□□□□ 0.35
HMGXB3-206ENST00000613459 NOS1APO75052 506 aaPredicted RBP17.21■□□□□ 0.34
HMGXB3-206ENST00000613459 DNAJB1P25685 340 aa17.21■□□□□ 0.34
HMGXB3-206ENST00000613459 GBE1Q04446 702 aa17.21■□□□□ 0.34
HMGXB3-206ENST00000613459 FAM110CQ1W6H9 321 aa17.21■□□□□ 0.34
HMGXB3-206ENST00000613459 PRR23BQ6ZRT6 265 aa17.21■□□□□ 0.34
HMGXB3-206ENST00000613459 KCTD8Q6ZWB6 473 aa17.21■□□□□ 0.34
HMGXB3-206ENST00000613459 CBR4Q8N4T8 237 aa17.21■□□□□ 0.34
HMGXB3-206ENST00000613459 VANGL1Q8TAA9 524 aaPredicted RBP17.21■□□□□ 0.34
HMGXB3-206ENST00000613459 MAFBQ9Y5Q3 323 aaPredicted RBP17.21■□□□□ 0.34
HMGXB3-206ENST00000613459 NEDD8-MDP1E9PL57 170 aa17.2■□□□□ 0.34
HMGXB3-206ENST00000613459 CCR10P46092 362 aa17.2■□□□□ 0.34
HMGXB3-206ENST00000613459 KHKP50053 298 aa17.2■□□□□ 0.34
HMGXB3-206ENST00000613459 SIM2Q14190 667 aaPredicted RBP17.2■□□□□ 0.34
HMGXB3-206ENST00000613459 ADGRE1Q14246 886 aa17.2■□□□□ 0.34
HMGXB3-206ENST00000613459 BRSK1Q8TDC3 778 aa17.2■□□□□ 0.34
HMGXB3-206ENST00000613459 NEK7Q8TDX7 302 aa17.2■□□□□ 0.34
HMGXB3-206ENST00000613459 RNF31Q96EP0 1072 aa17.2■□□□□ 0.34
HMGXB3-206ENST00000613459 C5orf34Q96MH7 638 aa17.2■□□□□ 0.34
HMGXB3-206ENST00000613459 PAK6Q9NQU5 681 aaPredicted RBP17.2■□□□□ 0.34
HMGXB3-206ENST00000613459 CHRAC1Q9NRG0 131 aa17.2■□□□□ 0.34
HMGXB3-206ENST00000613459 PCDHGA11Q9Y5H2 935 aa17.2■□□□□ 0.34
HMGXB3-206ENST00000613459 SELPP16109 830 aa17.2■□□□□ 0.34
HMGXB3-206ENST00000613459 ATF6P18850 670 aa17.2■□□□□ 0.34
HMGXB3-206ENST00000613459 NR4A1P22736 598 aa17.2■□□□□ 0.34
HMGXB3-206ENST00000613459 MAPK12P53778 367 aa17.2■□□□□ 0.34
HMGXB3-206ENST00000613459 ZNF155Q12901 538 aaPredicted RBP17.2■□□□□ 0.34
HMGXB3-206ENST00000613459 SF1Q15637 639 aaKnown RBP17.2■□□□□ 0.34
HMGXB3-206ENST00000613459 ESRP1Q6NXG1 681 aaKnown RBP17.2■□□□□ 0.34
HMGXB3-206ENST00000613459 OR5K1Q8NHB7 308 aa17.2■□□□□ 0.34
HMGXB3-206ENST00000613459 LRTOMTQ8WZ04 291 aa17.2■□□□□ 0.34
HMGXB3-206ENST00000613459 BHLHE41Q9C0J9 482 aaPredicted RBP17.2■□□□□ 0.34
HMGXB3-206ENST00000613459 TFB2MQ9H5Q4 396 aaKnown RBP17.2■□□□□ 0.34
HMGXB3-206ENST00000613459 IKZF2Q9UKS7 526 aa17.2■□□□□ 0.34
HMGXB3-206ENST00000613459 MAGEB17A8MXT2 336 aa17.2■□□□□ 0.34
HMGXB3-206ENST00000613459 TP73O15350 636 aa17.2■□□□□ 0.34
HMGXB3-206ENST00000613459 FKTNO75072 461 aa17.2■□□□□ 0.34
HMGXB3-206ENST00000613459 RSL1D1O76021 490 aaKnown RBP17.2■□□□□ 0.34
HMGXB3-206ENST00000613459 SERPINA3P01011 423 aa17.2■□□□□ 0.34
HMGXB3-206ENST00000613459 PTGIRP43119 386 aa17.2■□□□□ 0.34
HMGXB3-206ENST00000613459 EML3Q32P44 896 aa17.2■□□□□ 0.34
HMGXB3-206ENST00000613459 ZNF567Q8N184 647 aa17.2■□□□□ 0.34
HMGXB3-206ENST00000613459 NIPA2Q8N8Q9 360 aa17.2■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 56.9 ms