RNA–Protein interactions for RNA: ENST00000613296.4

ALMS1-206, Transcript of ALMS1, centrosome and basal body associated protein, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene ALMS1, Length 12,925 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ALMS1-206ENST00000613296 BTBD16Q32M84 506 aa8.29□□□□□ -1.08
ALMS1-206ENST00000613296 IFNA5P01569 189 aa8.29□□□□□ -1.08
ALMS1-206ENST00000613296 ZNF81P51508 661 aa8.29□□□□□ -1.08
ALMS1-206ENST00000613296 POLR2JP52435 117 aaKnown RBP8.29□□□□□ -1.08
ALMS1-206ENST00000613296 PRR5P85299 388 aa8.29□□□□□ -1.08
ALMS1-206ENST00000613296 PMEPA1Q969W9 287 aa8.29□□□□□ -1.08
ALMS1-206ENST00000613296 TMEM176AQ96HP8 235 aa8.29□□□□□ -1.08
ALMS1-206ENST00000613296 PRPF19Q9UMS4 504 aaKnown RBP8.29□□□□□ -1.08
ALMS1-206ENST00000613296 ASXL2Q76L83 1435 aa8.29□□□□□ -1.08
ALMS1-206ENST00000613296 FBP2O00757 339 aa8.29□□□□□ -1.08
ALMS1-206ENST00000613296 ITPKAP23677 461 aa8.29□□□□□ -1.08
ALMS1-206ENST00000613296 ICAM3P32942 547 aa8.29□□□□□ -1.08
ALMS1-206ENST00000613296 PQLC1Q8N2U9 271 aa8.29□□□□□ -1.08
ALMS1-206ENST00000613296 SLC38A4Q969I6 547 aa8.29□□□□□ -1.08
ALMS1-206ENST00000613296 EXOSC8Q96B26 276 aaKnown RBP8.29□□□□□ -1.08
ALMS1-206ENST00000613296 CDT1Q9H211 546 aa8.29□□□□□ -1.08
ALMS1-206ENST00000613296 PLAGL2Q9UPG8 496 aa8.29□□□□□ -1.08
ALMS1-206ENST00000613296 COL15A1P39059 1388 aa8.29□□□□□ -1.08
ALMS1-206ENST00000613296 ZNF132P52740 706 aa8.29□□□□□ -1.08
ALMS1-206ENST00000613296 LIMK2P53671 638 aa8.29□□□□□ -1.08
ALMS1-206ENST00000613296 CRISP1P54107 249 aa8.29□□□□□ -1.08
ALMS1-206ENST00000613296 CAPN13Q6MZZ7 669 aaPredicted RBP8.29□□□□□ -1.08
ALMS1-206ENST00000613296 MFSD2AQ8NA29 543 aa8.29□□□□□ -1.08
ALMS1-206ENST00000613296 TNFRSF25Q93038 417 aa8.29□□□□□ -1.08
ALMS1-206ENST00000613296 ELOVL2Q9NXB9 296 aa8.29□□□□□ -1.08
ALMS1-206ENST00000613296 AGAP5A6NIR3 686 aa8.29□□□□□ -1.08
ALMS1-206ENST00000613296 SLC9A3R1O14745 358 aaPredicted RBP8.29□□□□□ -1.08
ALMS1-206ENST00000613296 CASC3O15234 703 aaKnown RBP8.29□□□□□ -1.08
ALMS1-206ENST00000613296 ITGA10O75578 1167 aa8.29□□□□□ -1.08
ALMS1-206ENST00000613296 ELFN1P0C7U0 828 aa8.29□□□□□ -1.08
ALMS1-206ENST00000613296 CCNHP51946 323 aaPredicted RBP8.29□□□□□ -1.08
ALMS1-206ENST00000613296 MYL6P60660 151 aa8.29□□□□□ -1.08
ALMS1-206ENST00000613296 FAM171A1Q5VUB5 890 aa8.29□□□□□ -1.08
ALMS1-206ENST00000613296 SCIMPQ6UWF3 145 aa8.29□□□□□ -1.08
ALMS1-206ENST00000613296 ABRAQ8N0Z2 381 aa8.29□□□□□ -1.08
ALMS1-206ENST00000613296 NODALQ96S42 347 aa8.29□□□□□ -1.08
ALMS1-206ENST00000613296 RCOR3Q9P2K3 495 aaPredicted RBP8.29□□□□□ -1.08
ALMS1-206ENST00000613296 KCNE2Q9Y6J6 123 aa8.29□□□□□ -1.08
ALMS1-206ENST00000613296 ELOA3DA6NLF2 546 aaPredicted RBP8.29□□□□□ -1.08
ALMS1-206ENST00000613296 ELOA3BQ3SY89 546 aa8.29□□□□□ -1.08
ALMS1-206ENST00000613296 ZDHHC17Q8IUH5 632 aa8.29□□□□□ -1.08
ALMS1-206ENST00000613296 SLC37A3Q8NCC5 494 aa8.29□□□□□ -1.08
ALMS1-206ENST00000613296 ELOA3Q8NG57 546 aa8.29□□□□□ -1.08
ALMS1-206ENST00000613296 BPIFA1Q9NP55 256 aa8.29□□□□□ -1.08
ALMS1-206ENST00000613296 IMP3Q9NV31 184 aaKnown RBP8.29□□□□□ -1.08
ALMS1-206ENST00000613296 VNN3Q9NY84 501 aa8.29□□□□□ -1.08
ALMS1-206ENST00000613296 LRFN1Q9P244 771 aa8.29□□□□□ -1.08
ALMS1-206ENST00000613296 CCDC88CQ9P219 2028 aa8.29□□□□□ -1.08
ALMS1-206ENST00000613296 CROCC2H7BZ55 1655 aa8.29□□□□□ -1.08
ALMS1-206ENST00000613296 C19orf81C9J6K1 198 aa8.29□□□□□ -1.08
ALMS1-206ENST00000613296 ANXA3P12429 323 aa8.29□□□□□ -1.08
ALMS1-206ENST00000613296 IL1R1P14778 569 aa8.29□□□□□ -1.08
ALMS1-206ENST00000613296 CASRP41180 1078 aa8.29□□□□□ -1.08
ALMS1-206ENST00000613296 SREBF2Q12772 1141 aa8.29□□□□□ -1.08
ALMS1-206ENST00000613296 MFSD13AQ14CX5 517 aa8.29□□□□□ -1.08
ALMS1-206ENST00000613296 YTHDF3Q7Z739 585 aaKnown RBP8.29□□□□□ -1.08
ALMS1-206ENST00000613296 SVOPLQ8N434 492 aa8.29□□□□□ -1.08
ALMS1-206ENST00000613296 ZNF676Q8N7Q3 588 aa8.29□□□□□ -1.08
ALMS1-206ENST00000613296 KCTD7Q96MP8 289 aa8.29□□□□□ -1.08
ALMS1-206ENST00000613296 PNO1Q9NRX1 252 aaKnown RBP8.29□□□□□ -1.08
ALMS1-206ENST00000613296 CACNA1CQ13936 2221 aa8.29□□□□□ -1.08
ALMS1-206ENST00000613296 A0A0A0MRY4 1105 aa8.29□□□□□ -1.08
ALMS1-206ENST00000613296 M0QX08 132 aa8.29□□□□□ -1.08
ALMS1-206ENST00000613296 TACSTD2P09758 323 aa8.29□□□□□ -1.08
ALMS1-206ENST00000613296 SLC26A5P58743 744 aa8.29□□□□□ -1.08
ALMS1-206ENST00000613296 SLC22A8Q8TCC7 542 aa8.29□□□□□ -1.08
ALMS1-206ENST00000613296 DQX1Q8TE96 717 aaKnown RBP8.29□□□□□ -1.08
ALMS1-206ENST00000613296 SPATA13Q96N96 652 aa8.29□□□□□ -1.08
ALMS1-206ENST00000613296 SCP2D1Q9UJQ7 156 aa8.29□□□□□ -1.08
ALMS1-206ENST00000613296 NEDD8-MDP1E9PL57 170 aa8.29□□□□□ -1.08
ALMS1-206ENST00000613296 SLC34A2O95436 690 aa8.29□□□□□ -1.08
ALMS1-206ENST00000613296 CSTBP04080 98 aaKnown RBP8.29□□□□□ -1.08
ALMS1-206ENST00000613296 KHKP50053 298 aa8.29□□□□□ -1.08
ALMS1-206ENST00000613296 ABRAXAS2Q15018 415 aa8.29□□□□□ -1.08
ALMS1-206ENST00000613296 DNAJB7Q7Z6W7 309 aaPredicted RBP8.29□□□□□ -1.08
ALMS1-206ENST00000613296 LINGO1Q96FE5 620 aa8.29□□□□□ -1.08
ALMS1-206ENST00000613296 ELOVL4Q9GZR5 314 aa8.29□□□□□ -1.08
ALMS1-206ENST00000613296 CAPN8A6NHC0 703 aa8.28□□□□□ -1.08
ALMS1-206ENST00000613296 GSTT2P0CG29 244 aa8.28□□□□□ -1.08
ALMS1-206ENST00000613296 CDKN2CP42773 168 aa8.28□□□□□ -1.08
ALMS1-206ENST00000613296 TLE3Q04726 772 aa8.28□□□□□ -1.08
ALMS1-206ENST00000613296 ZNF268Q14587 947 aaPredicted RBP8.28□□□□□ -1.08
ALMS1-206ENST00000613296 FAM151BQ6UXP7 276 aa8.28□□□□□ -1.08
ALMS1-206ENST00000613296 USP51Q70EK9 711 aa8.28□□□□□ -1.08
ALMS1-206ENST00000613296 CBR4Q8N4T8 237 aa8.28□□□□□ -1.08
ALMS1-206ENST00000613296 HCAR2Q8TDS4 363 aa8.28□□□□□ -1.08
ALMS1-206ENST00000613296 AENQ8WTP8 325 aaKnown RBP8.28□□□□□ -1.08
ALMS1-206ENST00000613296 NPAS2Q99743 824 aa8.28□□□□□ -1.08
ALMS1-206ENST00000613296 FBRSQ9HAH7 460 aa8.28□□□□□ -1.08
ALMS1-206ENST00000613296 MYO5CQ9NQX4 1742 aa8.28□□□□□ -1.08
ALMS1-206ENST00000613296 TRAF6Q9Y4K3 522 aa8.28□□□□□ -1.08
ALMS1-206ENST00000613296 TEX51A0A1B0GUA7 166 aa8.28□□□□□ -1.08
ALMS1-206ENST00000613296 C1QTNF3-AMACRE9PGA6 284 aa8.28□□□□□ -1.08
ALMS1-206ENST00000613296 KHNYNO15037 678 aaKnown RBP8.28□□□□□ -1.08
ALMS1-206ENST00000613296 BRINP1O60477 761 aa8.28□□□□□ -1.08
ALMS1-206ENST00000613296 AKAP3O75969 853 aa8.28□□□□□ -1.08
ALMS1-206ENST00000613296 CETPP11597 493 aa8.28□□□□□ -1.08
ALMS1-206ENST00000613296 BCKDHAP12694 445 aa8.28□□□□□ -1.08
ALMS1-206ENST00000613296 ZNF45Q02386 682 aa8.28□□□□□ -1.08
ALMS1-206ENST00000613296 CHRFAM7AQ494W8 412 aa8.28□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms