RNA–Protein interactions for RNA: ENST00000613099.4

VPS13D-213, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VPS13D, Length 16,245 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-213ENST00000613099 PER2O15055 1255 aa4.9□□□□□ -1.63
VPS13D-213ENST00000613099 SLC26A2P50443 739 aa4.9□□□□□ -1.63
VPS13D-213ENST00000613099 MC2RQ01718 297 aa4.9□□□□□ -1.63
VPS13D-213ENST00000613099 MOB2Q70IA6 237 aa4.9□□□□□ -1.63
VPS13D-213ENST00000613099 CHMP1BQ7LBR1 199 aa4.9□□□□□ -1.63
VPS13D-213ENST00000613099 OR5K1Q8NHB7 308 aa4.9□□□□□ -1.63
VPS13D-213ENST00000613099 RAD51AP1Q96B01 352 aa4.9□□□□□ -1.63
VPS13D-213ENST00000613099 FEM1CQ96JP0 617 aa4.9□□□□□ -1.63
VPS13D-213ENST00000613099 RBCK1Q9BYM8 510 aa4.9□□□□□ -1.63
VPS13D-213ENST00000613099 PCIF1Q9H4Z3 704 aa4.9□□□□□ -1.63
VPS13D-213ENST00000613099 CASS4Q9NQ75 786 aa4.9□□□□□ -1.63
VPS13D-213ENST00000613099 CNOT6Q9ULM6 557 aaKnown RBP4.9□□□□□ -1.63
VPS13D-213ENST00000613099 SMCO3A2RU48 225 aa4.9□□□□□ -1.63
VPS13D-213ENST00000613099 LRRC14BA6NHZ5 514 aa4.9□□□□□ -1.63
VPS13D-213ENST00000613099 ABL1P00519 1130 aa4.9□□□□□ -1.63
VPS13D-213ENST00000613099 CYP2C8P10632 490 aa4.9□□□□□ -1.63
VPS13D-213ENST00000613099 EFHC2Q5JST6 749 aa4.9□□□□□ -1.63
VPS13D-213ENST00000613099 C6orf141Q5SZD1 244 aa4.9□□□□□ -1.63
VPS13D-213ENST00000613099 LRRN1Q6UXK5 716 aa4.9□□□□□ -1.63
VPS13D-213ENST00000613099 FAM124AQ86V42 546 aa4.9□□□□□ -1.63
VPS13D-213ENST00000613099 NUDT15Q9NV35 164 aa4.9□□□□□ -1.63
VPS13D-213ENST00000613099 A3GALT2U3KPV4 340 aa4.9□□□□□ -1.63
VPS13D-213ENST00000613099 GSTM1P09488 218 aa4.9□□□□□ -1.63
VPS13D-213ENST00000613099 UCHL1P09936 223 aa4.9□□□□□ -1.63
VPS13D-213ENST00000613099 AP1S3Q96PC3 154 aa4.9□□□□□ -1.63
VPS13D-213ENST00000613099 KIAA1257Q9ULG3 409 aa4.9□□□□□ -1.63
VPS13D-213ENST00000613099 OAZ3Q9UMX2 235 aa4.9□□□□□ -1.63
VPS13D-213ENST00000613099 STUB1Q9UNE7 303 aa4.9□□□□□ -1.63
VPS13D-213ENST00000613099 CORO2BQ9UQ03 480 aa4.9□□□□□ -1.63
VPS13D-213ENST00000613099 PCDHB12Q9Y5F1 795 aa4.9□□□□□ -1.63
VPS13D-213ENST00000613099 EFCAB7A8K855 629 aa4.9□□□□□ -1.63
VPS13D-213ENST00000613099 OAZ2O95190 189 aa4.9□□□□□ -1.63
VPS13D-213ENST00000613099 FTH1P02794 183 aa4.9□□□□□ -1.63
VPS13D-213ENST00000613099 CYP11A1P05108 521 aa4.9□□□□□ -1.63
VPS13D-213ENST00000613099 SERPINF1P36955 418 aa4.9□□□□□ -1.63
VPS13D-213ENST00000613099 BRCC3P46736 316 aa4.9□□□□□ -1.63
VPS13D-213ENST00000613099 NR0B1P51843 470 aaKnown RBP4.9□□□□□ -1.63
VPS13D-213ENST00000613099 DAG1Q14118 895 aa4.9□□□□□ -1.63
VPS13D-213ENST00000613099 MED22Q15528 200 aa4.9□□□□□ -1.63
VPS13D-213ENST00000613099 TPGS1Q6ZTW0 290 aa4.9□□□□□ -1.63
VPS13D-213ENST00000613099 NPAS2Q99743 824 aa4.9□□□□□ -1.63
VPS13D-213ENST00000613099 PLA2G12BQ9BX93 195 aa4.9□□□□□ -1.63
VPS13D-213ENST00000613099 RGCCQ9H4X1 137 aa4.9□□□□□ -1.63
VPS13D-213ENST00000613099 LRRC4Q9HBW1 653 aa4.9□□□□□ -1.63
VPS13D-213ENST00000613099 TMEM39AQ9NV64 488 aa4.9□□□□□ -1.63
VPS13D-213ENST00000613099 GINS2Q9Y248 185 aa4.9□□□□□ -1.63
VPS13D-213ENST00000613099 INVSQ9Y283 1065 aa4.9□□□□□ -1.63
VPS13D-213ENST00000613099 DOCK2Q92608 1830 aa4.9□□□□□ -1.63
VPS13D-213ENST00000613099 MSCO60682 206 aa4.9□□□□□ -1.63
VPS13D-213ENST00000613099 MYL3P08590 195 aa4.9□□□□□ -1.63
VPS13D-213ENST00000613099 HUNKP57058 714 aa4.9□□□□□ -1.63
VPS13D-213ENST00000613099 PEA15Q15121 130 aa4.9□□□□□ -1.63
VPS13D-213ENST00000613099 ARHGAP15Q53QZ3 475 aa4.9□□□□□ -1.63
VPS13D-213ENST00000613099 PID1Q7Z2X4 250 aa4.9□□□□□ -1.63
VPS13D-213ENST00000613099 CACUL1Q86Y37 369 aa4.9□□□□□ -1.63
VPS13D-213ENST00000613099 DCUN1D3Q8IWE4 304 aa4.9□□□□□ -1.63
VPS13D-213ENST00000613099 LPAR1Q92633 364 aa4.9□□□□□ -1.63
VPS13D-213ENST00000613099 TARS2Q9BW92 718 aaKnown RBP4.9□□□□□ -1.63
VPS13D-213ENST00000613099 DNAJB9Q9UBS3 223 aa4.9□□□□□ -1.63
VPS13D-213ENST00000613099 PCDHA6Q9UN73 950 aa4.9□□□□□ -1.63
VPS13D-213ENST00000613099 PCDHA8Q9Y5H6 950 aa4.9□□□□□ -1.63
VPS13D-213ENST00000613099 SPDYE2BA6NHP3 402 aa4.9□□□□□ -1.63
VPS13D-213ENST00000613099 IL1BP01584 269 aa4.9□□□□□ -1.63
VPS13D-213ENST00000613099 SPDYE6P0CI01 402 aa4.9□□□□□ -1.63
VPS13D-213ENST00000613099 BMP1P13497 986 aa4.9□□□□□ -1.63
VPS13D-213ENST00000613099 DNASE1P24855 282 aa4.9□□□□□ -1.63
VPS13D-213ENST00000613099 EPHA3P29320 983 aa4.9□□□□□ -1.63
VPS13D-213ENST00000613099 SPDYE2Q495Y8 402 aa4.9□□□□□ -1.63
VPS13D-213ENST00000613099 GLYATQ6IB77 296 aa4.9□□□□□ -1.63
VPS13D-213ENST00000613099 C3P1Q6ZMU1 363 aa4.9□□□□□ -1.63
VPS13D-213ENST00000613099 ZNF704Q6ZNC4 412 aaPredicted RBP4.9□□□□□ -1.63
VPS13D-213ENST00000613099 PPP1R3FQ6ZSY5 799 aaPredicted RBP4.9□□□□□ -1.63
VPS13D-213ENST00000613099 ABI1Q8IZP0 508 aa4.9□□□□□ -1.63
VPS13D-213ENST00000613099 DDX51Q8N8A6 666 aaKnown RBP eCLIP4.9□□□□□ -1.63
VPS13D-213ENST00000613099 ALG3Q92685 438 aa4.9□□□□□ -1.63
VPS13D-213ENST00000613099 KLHL11Q9NVR0 708 aa4.9□□□□□ -1.63
VPS13D-213ENST00000613099 C14orf119Q9NWQ9 140 aa4.9□□□□□ -1.63
VPS13D-213ENST00000613099 NOSIPQ9Y314 301 aaKnown RBP4.9□□□□□ -1.63
VPS13D-213ENST00000613099 MEMO1Q9Y316 297 aa4.9□□□□□ -1.63
VPS13D-213ENST00000613099 A0A0B4J203 849 aa4.89□□□□□ -1.63
VPS13D-213ENST00000613099 CABYRO75952 493 aa4.89□□□□□ -1.63
VPS13D-213ENST00000613099 ALDH4A1P30038 563 aa4.89□□□□□ -1.63
VPS13D-213ENST00000613099 PADI6Q6TGC4 694 aa4.89□□□□□ -1.63
VPS13D-213ENST00000613099 FIP1L1Q6UN15 594 aaKnown RBP4.89□□□□□ -1.63
VPS13D-213ENST00000613099 PTCHD4Q6ZW05 846 aa4.89□□□□□ -1.63
VPS13D-213ENST00000613099 OR4D10Q8NGI6 311 aa4.89□□□□□ -1.63
VPS13D-213ENST00000613099 MCEEQ96PE7 176 aa4.89□□□□□ -1.63
VPS13D-213ENST00000613099 EMC7Q9NPA0 242 aa4.89□□□□□ -1.63
VPS13D-213ENST00000613099 PNPOQ9NVS9 261 aa4.89□□□□□ -1.63
VPS13D-213ENST00000613099 IL37Q9NZH6 218 aa4.89□□□□□ -1.63
VPS13D-213ENST00000613099 ZNF638Q14966 1978 aaKnown RBP4.89□□□□□ -1.63
VPS13D-213ENST00000613099 IRS4O14654 1257 aaPredicted RBP4.89□□□□□ -1.63
VPS13D-213ENST00000613099 CHST10O43529 356 aa4.89□□□□□ -1.63
VPS13D-213ENST00000613099 ANXA5P08758 320 aa4.89□□□□□ -1.63
VPS13D-213ENST00000613099 HNRNPLP14866 589 aaKnown RBP eCLIP4.89□□□□□ -1.637e-7■■■■■ 31.3
VPS13D-213ENST00000613099 LIMK2P53671 638 aa4.89□□□□□ -1.63
VPS13D-213ENST00000613099 MRPS10P82664 201 aaKnown RBP4.89□□□□□ -1.63
VPS13D-213ENST00000613099 CYP24A1Q07973 514 aa4.89□□□□□ -1.63
VPS13D-213ENST00000613099 PKN3Q6P5Z2 889 aa4.89□□□□□ -1.63
VPS13D-213ENST00000613099 NLRX1Q86UT6 975 aa4.89□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 57.9 ms