RNA–Protein interactions for RNA: ENST00000612856.4

FAM3A-221, Transcript of family with sequence similarity 3 member A, humanhuman

TSL 2

Gene FAM3A, Length 3,995 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM3A-221ENST00000612856 CCDC167Q9P0B6 97 aa10.72□□□□□ -0.69
FAM3A-221ENST00000612856 DKK3Q9UBP4 350 aa10.72□□□□□ -0.69
FAM3A-221ENST00000612856 CNTN6Q9UQ52 1028 aa10.72□□□□□ -0.69
FAM3A-221ENST00000612856 CCL26Q9Y258 94 aa10.72□□□□□ -0.69
FAM3A-221ENST00000612856 PSME4Q14997 1843 aa10.72□□□□□ -0.69
FAM3A-221ENST00000612856 A0A1W2PP55 124 aa10.72□□□□□ -0.69
FAM3A-221ENST00000612856 ANGPT2O15123 496 aa10.72□□□□□ -0.69
FAM3A-221ENST00000612856 SMIM18P0DKX4 95 aa10.72□□□□□ -0.69
FAM3A-221ENST00000612856 HOXD11P31277 338 aaPredicted RBP10.72□□□□□ -0.69
FAM3A-221ENST00000612856 PRKAG1P54619 331 aa10.72□□□□□ -0.69
FAM3A-221ENST00000612856 ZNF423Q2M1K9 1284 aa10.72□□□□□ -0.69
FAM3A-221ENST00000612856 AAK1Q2M2I8 961 aa10.72□□□□□ -0.69
FAM3A-221ENST00000612856 PARP15Q460N3 678 aa10.72□□□□□ -0.69
FAM3A-221ENST00000612856 TMEM198Q66K66 360 aa10.72□□□□□ -0.69
FAM3A-221ENST00000612856 C4orf22Q6V702 233 aa10.72□□□□□ -0.69
FAM3A-221ENST00000612856 DPY19L3Q6ZPD9 716 aa10.72□□□□□ -0.69
FAM3A-221ENST00000612856 BNIPLQ7Z465 357 aa10.72□□□□□ -0.69
FAM3A-221ENST00000612856 UBR7Q8N806 425 aa10.72□□□□□ -0.69
FAM3A-221ENST00000612856 CEP295NLQ96MC4 621 aa10.72□□□□□ -0.69
FAM3A-221ENST00000612856 SYTL2Q9HCH5 934 aa10.72□□□□□ -0.69
FAM3A-221ENST00000612856 HEBP1Q9NRV9 189 aa10.72□□□□□ -0.69
FAM3A-221ENST00000612856 PNPLA3Q9NST1 481 aa10.72□□□□□ -0.69
FAM3A-221ENST00000612856 TBCCD1Q9NVR7 557 aa10.72□□□□□ -0.69
FAM3A-221ENST00000612856 SCN1AP35498 2009 aa10.72□□□□□ -0.69
FAM3A-221ENST00000612856 DEAF1O75398 565 aaPredicted RBP10.72□□□□□ -0.69
FAM3A-221ENST00000612856 NDST3O95803 873 aa10.72□□□□□ -0.69
FAM3A-221ENST00000612856 ACP5P13686 325 aa10.72□□□□□ -0.69
FAM3A-221ENST00000612856 SLC2A4P14672 509 aa10.72□□□□□ -0.69
FAM3A-221ENST00000612856 IRF8Q02556 426 aa10.72□□□□□ -0.69
FAM3A-221ENST00000612856 WASHC5Q12768 1159 aa10.72□□□□□ -0.69
FAM3A-221ENST00000612856 PON2Q15165 354 aa10.72□□□□□ -0.69
FAM3A-221ENST00000612856 ZNF648Q5T619 568 aaPredicted RBP10.72□□□□□ -0.69
FAM3A-221ENST00000612856 UGT3A1Q6NUS8 523 aa10.72□□□□□ -0.69
FAM3A-221ENST00000612856 KYAT3Q6YP21 454 aaKnown RBP10.72□□□□□ -0.69
FAM3A-221ENST00000612856 Q8N9G6 341 aaPredicted RBP10.72□□□□□ -0.69
FAM3A-221ENST00000612856 ADCY4Q8NFM4 1077 aa10.72□□□□□ -0.69
FAM3A-221ENST00000612856 TMEM174Q8WUU8 243 aa10.72□□□□□ -0.69
FAM3A-221ENST00000612856 SLC44A1Q8WWI5 657 aa10.72□□□□□ -0.69
FAM3A-221ENST00000612856 ISOC1Q96CN7 298 aa10.72□□□□□ -0.69
FAM3A-221ENST00000612856 THUMPD3Q9BV44 507 aaKnown RBP10.72□□□□□ -0.69
FAM3A-221ENST00000612856 OSBPL10Q9BXB5 764 aa10.72□□□□□ -0.69
FAM3A-221ENST00000612856 SEZ6LQ9BYH1 1024 aa10.72□□□□□ -0.69
FAM3A-221ENST00000612856 ILKAPQ9H0C8 392 aaPredicted RBP10.72□□□□□ -0.69
FAM3A-221ENST00000612856 MAGEH1Q9H213 219 aa10.72□□□□□ -0.69
FAM3A-221ENST00000612856 CRISPLD1Q9H336 500 aa10.72□□□□□ -0.69
FAM3A-221ENST00000612856 CROTQ9UKG9 612 aa10.72□□□□□ -0.69
FAM3A-221ENST00000612856 TMEM98Q9Y2Y6 226 aa10.72□□□□□ -0.69
FAM3A-221ENST00000612856 NME7Q9Y5B8 376 aa10.72□□□□□ -0.69
FAM3A-221ENST00000612856 SNX8Q9Y5X2 465 aa10.72□□□□□ -0.69
FAM3A-221ENST00000612856 CEPT1Q9Y6K0 416 aa10.72□□□□□ -0.69
FAM3A-221ENST00000612856 ZNFX1Q9P2E3 1918 aaKnown RBP10.71□□□□□ -0.69
FAM3A-221ENST00000612856 GLYATL1P3A0A0U1RQE8 302 aa10.71□□□□□ -0.69
FAM3A-221ENST00000612856 MATN3O15232 486 aa10.71□□□□□ -0.69
FAM3A-221ENST00000612856 SERPINE1P05121 402 aa10.71□□□□□ -0.69
FAM3A-221ENST00000612856 CCNA2P20248 432 aa10.71□□□□□ -0.69
FAM3A-221ENST00000612856 GRIA3P42263 894 aa10.71□□□□□ -0.69
FAM3A-221ENST00000612856 TGFBIQ15582 683 aa10.71□□□□□ -0.69
FAM3A-221ENST00000612856 PITRM1Q5JRX3 1037 aa10.71□□□□□ -0.69
FAM3A-221ENST00000612856 GPSM1Q86YR5 675 aa10.71□□□□□ -0.69
FAM3A-221ENST00000612856 MARVELD2Q8N4S9 558 aa10.71□□□□□ -0.69
FAM3A-221ENST00000612856 PTGR2Q8N8N7 351 aaPredicted RBP10.71□□□□□ -0.69
FAM3A-221ENST00000612856 TXNDC5Q8NBS9 432 aaKnown RBP10.71□□□□□ -0.69
FAM3A-221ENST00000612856 GLMNQ92990 594 aa10.71□□□□□ -0.69
FAM3A-221ENST00000612856 LINGO1Q96FE5 620 aa10.71□□□□□ -0.69
FAM3A-221ENST00000612856 C7orf26Q96N11 449 aa10.71□□□□□ -0.69
FAM3A-221ENST00000612856 CITED4Q96RK1 184 aa10.71□□□□□ -0.69
FAM3A-221ENST00000612856 NMRAL1Q9HBL8 299 aa10.71□□□□□ -0.69
FAM3A-221ENST00000612856 NCKIPSDQ9NZQ3 722 aa10.71□□□□□ -0.69
FAM3A-221ENST00000612856 CYP8B1Q9UNU6 501 aa10.71□□□□□ -0.69
FAM3A-221ENST00000612856 VPS9D1Q9Y2B5 631 aa10.71□□□□□ -0.69
FAM3A-221ENST00000612856 PIAS3Q9Y6X2 628 aa10.71□□□□□ -0.69
FAM3A-221ENST00000612856 TRIP12Q14669 1992 aaPredicted RBP10.71□□□□□ -0.69
FAM3A-221ENST00000612856 CPED1A4D0V7 1026 aa10.71□□□□□ -0.69
FAM3A-221ENST00000612856 NEMP2A6NFY4 417 aa10.71□□□□□ -0.69
FAM3A-221ENST00000612856 TP73O15350 636 aa10.71□□□□□ -0.69
FAM3A-221ENST00000612856 POP4O95707 220 aaKnown RBP10.71□□□□□ -0.69
FAM3A-221ENST00000612856 FUCA1P04066 466 aa10.71□□□□□ -0.69
FAM3A-221ENST00000612856 CCDC159P0C7I6 412 aa10.71□□□□□ -0.69
FAM3A-221ENST00000612856 ZNF12P17014 697 aa10.71□□□□□ -0.69
FAM3A-221ENST00000612856 ITGB8P26012 769 aa10.71□□□□□ -0.69
FAM3A-221ENST00000612856 PRKAA1Q13131 559 aa10.71□□□□□ -0.69
FAM3A-221ENST00000612856 PLEKHG6Q3KR16 790 aa10.71□□□□□ -0.69
FAM3A-221ENST00000612856 TBCELQ5QJ74 424 aa10.71□□□□□ -0.69
FAM3A-221ENST00000612856 ZFP1Q6P2D0 407 aa10.71□□□□□ -0.69
FAM3A-221ENST00000612856 SCD5Q86SK9 330 aa10.71□□□□□ -0.69
FAM3A-221ENST00000612856 PSMA8Q8TAA3 256 aa10.71□□□□□ -0.69
FAM3A-221ENST00000612856 MAGEE2Q8TD90 523 aaPredicted RBP10.71□□□□□ -0.69
FAM3A-221ENST00000612856 TEKT5Q96M29 485 aa10.71□□□□□ -0.69
FAM3A-221ENST00000612856 GPR21Q99679 349 aa10.71□□□□□ -0.69
FAM3A-221ENST00000612856 CCDC106Q9BWC9 280 aa10.71□□□□□ -0.69
FAM3A-221ENST00000612856 DNAJC28Q9NX36 388 aa10.71□□□□□ -0.69
FAM3A-221ENST00000612856 XPR1Q9UBH6 696 aa10.71□□□□□ -0.69
FAM3A-221ENST00000612856 SNX5Q9Y5X3 404 aa10.71□□□□□ -0.69
FAM3A-221ENST00000612856 TTC34A8MYJ7 566 aa10.71□□□□□ -0.7
FAM3A-221ENST00000612856 CACNB4O00305 520 aaPredicted RBP10.71□□□□□ -0.7
FAM3A-221ENST00000612856 GLRA3O75311 464 aa10.71□□□□□ -0.7
FAM3A-221ENST00000612856 TULP3O75386 442 aa10.71□□□□□ -0.7
FAM3A-221ENST00000612856 SERPINB7O75635 380 aa10.71□□□□□ -0.7
FAM3A-221ENST00000612856 OAZ2O95190 189 aa10.71□□□□□ -0.7
FAM3A-221ENST00000612856 ENO2P09104 434 aaPredicted RBP10.71□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms