RNA–Protein interactions for RNA: ENST00000612672.1

MMP28-203, Transcript of matrix metallopeptidase 28, humanhuman

TSL 1 (best) BASIC

Gene MMP28, Length 1,092 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MMP28-203ENST00000612672 UGT1A4P22310 534 aa22.86■■□□□ 1.25
MMP28-203ENST00000612672 RORAP35398 523 aa22.86■■□□□ 1.25
MMP28-203ENST00000612672 HALP42357 657 aa22.86■■□□□ 1.25
MMP28-203ENST00000612672 NR6A1Q15406 480 aa22.86■■□□□ 1.25
MMP28-203ENST00000612672 ANO6Q4KMQ2 910 aa22.86■■□□□ 1.25
MMP28-203ENST00000612672 ZNF789Q5FWF6 425 aa22.86■■□□□ 1.25
MMP28-203ENST00000612672 BPHLQ86WA6 291 aaPredicted RBP22.86■■□□□ 1.25
MMP28-203ENST00000612672 KMT5CQ86Y97 462 aa22.86■■□□□ 1.25
MMP28-203ENST00000612672 DSELQ8IZU8 1212 aa22.86■■□□□ 1.25
MMP28-203ENST00000612672 BEND7Q8N7W2 519 aaPredicted RBP22.86■■□□□ 1.25
MMP28-203ENST00000612672 GDAP1Q8TB36 358 aa22.86■■□□□ 1.25
MMP28-203ENST00000612672 INSM2Q96T92 566 aaPredicted RBP22.86■■□□□ 1.25
MMP28-203ENST00000612672 NRTNQ99748 197 aa22.86■■□□□ 1.25
MMP28-203ENST00000612672 TLR10Q9BXR5 811 aa22.86■■□□□ 1.25
MMP28-203ENST00000612672 SLC25A51Q9H1U9 297 aa22.86■■□□□ 1.25
MMP28-203ENST00000612672 UGT1A7Q9HAW7 530 aa22.86■■□□□ 1.25
MMP28-203ENST00000612672 UGT1A10Q9HAW8 530 aa22.86■■□□□ 1.25
MMP28-203ENST00000612672 UGT1A8Q9HAW9 530 aa22.86■■□□□ 1.25
MMP28-203ENST00000612672 IL26Q9NPH9 171 aa22.86■■□□□ 1.25
MMP28-203ENST00000612672 KCND1Q9NSA2 647 aa22.86■■□□□ 1.25
MMP28-203ENST00000612672 IMP3Q9NV31 184 aaKnown RBP22.86■■□□□ 1.25
MMP28-203ENST00000612672 UBP1Q9NZI7 540 aa22.86■■□□□ 1.25
MMP28-203ENST00000612672 MAP10Q9P2G4 905 aa22.86■■□□□ 1.25
MMP28-203ENST00000612672 HEY1Q9Y5J3 304 aa22.86■■□□□ 1.25
MMP28-203ENST00000612672 UBA6A0AVT1 1052 aaPredicted RBP22.85■■□□□ 1.25
MMP28-203ENST00000612672 OR2AG2A6NM03 316 aa22.85■■□□□ 1.25
MMP28-203ENST00000612672 ENO4A6NNW6 628 aa22.85■■□□□ 1.25
MMP28-203ENST00000612672 DPM1O60762 260 aa22.85■■□□□ 1.25
MMP28-203ENST00000612672 MTHFD1P11586 935 aaKnown RBP22.85■■□□□ 1.25
MMP28-203ENST00000612672 KDELR1P24390 212 aa22.85■■□□□ 1.25
MMP28-203ENST00000612672 PBLDP30039 288 aaPredicted RBP22.85■■□□□ 1.25
MMP28-203ENST00000612672 AP1B1Q10567 949 aa22.85■■□□□ 1.25
MMP28-203ENST00000612672 AMZ2Q86W34 360 aa22.85■■□□□ 1.25
MMP28-203ENST00000612672 SPDYE1Q8NFV5 336 aaPredicted RBP22.85■■□□□ 1.25
MMP28-203ENST00000612672 PNPLA2Q96AD5 504 aa22.85■■□□□ 1.25
MMP28-203ENST00000612672 OLFM3Q96PB7 478 aa22.85■■□□□ 1.25
MMP28-203ENST00000612672 RANBP9Q96S59 729 aa22.85■■□□□ 1.25
MMP28-203ENST00000612672 CD180Q99467 661 aa22.85■■□□□ 1.25
MMP28-203ENST00000612672 SLAMF7Q9NQ25 335 aa22.85■■□□□ 1.25
MMP28-203ENST00000612672 HRASLS2Q9NWW9 162 aa22.85■■□□□ 1.25
MMP28-203ENST00000612672 TCFL5Q9UL49 500 aa22.85■■□□□ 1.25
MMP28-203ENST00000612672 SNX7Q9UNH6 387 aa22.85■■□□□ 1.25
MMP28-203ENST00000612672 AKAP9Q99996 3911 aa22.85■■□□□ 1.25
MMP28-203ENST00000612672 MDC1Q14676 2089 aaKnown RBP22.85■■□□□ 1.25
MMP28-203ENST00000612672 C3orf70A6NLC5 250 aaPredicted RBP22.84■■□□□ 1.25
MMP28-203ENST00000612672 MEN1O00255 615 aa22.84■■□□□ 1.25
MMP28-203ENST00000612672 NDST3O95803 873 aa22.84■■□□□ 1.25
MMP28-203ENST00000612672 VCLP18206 1134 aa22.84■■□□□ 1.25
MMP28-203ENST00000612672 ARL4DP49703 201 aa22.84■■□□□ 1.25
MMP28-203ENST00000612672 ATP1A4Q13733 1029 aa22.84■■□□□ 1.25
MMP28-203ENST00000612672 GTF2H3Q13889 308 aa22.84■■□□□ 1.25
MMP28-203ENST00000612672 TMEM220Q6QAJ8 160 aa22.84■■□□□ 1.25
MMP28-203ENST00000612672 SNRNP40Q96DI7 357 aaKnown RBP22.84■■□□□ 1.25
MMP28-203ENST00000612672 PACSIN1Q9BY11 444 aa22.84■■□□□ 1.25
MMP28-203ENST00000612672 CBX8Q9HC52 389 aa22.84■■□□□ 1.25
MMP28-203ENST00000612672 PCMTD2Q9NV79 361 aa22.84■■□□□ 1.25
MMP28-203ENST00000612672 BTRCQ9Y297 605 aa22.84■■□□□ 1.25
MMP28-203ENST00000612672 PCDHGB7Q9Y5F8 929 aa22.84■■□□□ 1.25
MMP28-203ENST00000612672 POLEQ07864 2286 aa22.83■■□□□ 1.25
MMP28-203ENST00000612672 SSU72P8A0A1W2PR75 194 aa22.83■■□□□ 1.25
MMP28-203ENST00000612672 PMPCBO75439 489 aa22.83■■□□□ 1.25
MMP28-203ENST00000612672 ZBTB11O95625 1053 aaPredicted RBP22.83■■□□□ 1.25
MMP28-203ENST00000612672 RAB40ALP0C0E4 278 aa22.83■■□□□ 1.25
MMP28-203ENST00000612672 CHRNA4P43681 627 aa22.83■■□□□ 1.25
MMP28-203ENST00000612672 PDE1BQ01064 536 aa22.83■■□□□ 1.25
MMP28-203ENST00000612672 NR1I3Q14994 352 aa22.83■■□□□ 1.25
MMP28-203ENST00000612672 PLEKHN1Q494U1 663 aaPredicted RBP22.83■■□□□ 1.25
MMP28-203ENST00000612672 SLC9A4Q6AI14 798 aa22.83■■□□□ 1.25
MMP28-203ENST00000612672 ALKBH5Q6P6C2 394 aaKnown RBP22.83■■□□□ 1.25
MMP28-203ENST00000612672 FAM151BQ6UXP7 276 aa22.83■■□□□ 1.25
MMP28-203ENST00000612672 GLIS1Q8NBF1 620 aa22.83■■□□□ 1.25
MMP28-203ENST00000612672 OR1L3Q8NH93 324 aa22.83■■□□□ 1.25
MMP28-203ENST00000612672 LRFN5Q96NI6 719 aa22.83■■□□□ 1.25
MMP28-203ENST00000612672 SMAD5Q99717 465 aaKnown RBP22.83■■□□□ 1.25
MMP28-203ENST00000612672 WWP1Q9H0M0 922 aa22.83■■□□□ 1.25
MMP28-203ENST00000612672 GLOD4Q9HC38 313 aa22.83■■□□□ 1.25
MMP28-203ENST00000612672 LATS2Q9NRM7 1088 aa22.83■■□□□ 1.25
MMP28-203ENST00000612672 ASF1BQ9NVP2 202 aa22.83■■□□□ 1.25
MMP28-203ENST00000612672 FBN2P35556 2912 aa22.83■■□□□ 1.24
MMP28-203ENST00000612672 OR6C74A6NCV1 312 aa22.82■■□□□ 1.24
MMP28-203ENST00000612672 BUD23O43709 281 aaKnown RBP22.82■■□□□ 1.24
MMP28-203ENST00000612672 CBX6O95503 412 aa22.82■■□□□ 1.24
MMP28-203ENST00000612672 HNRNPH3P31942 346 aaKnown RBP22.82■■□□□ 1.24
MMP28-203ENST00000612672 CD68P34810 354 aaPredicted RBP22.82■■□□□ 1.24
MMP28-203ENST00000612672 HMGCLP35914 325 aa22.82■■□□□ 1.24
MMP28-203ENST00000612672 VAV2P52735 878 aa22.82■■□□□ 1.24
MMP28-203ENST00000612672 SLC14A2Q15849 920 aa22.82■■□□□ 1.24
MMP28-203ENST00000612672 PTCHD3Q3KNS1 767 aa22.82■■□□□ 1.24
MMP28-203ENST00000612672 FIGNQ5HY92 759 aa22.82■■□□□ 1.24
MMP28-203ENST00000612672 GPRC6AQ5T6X5 926 aa22.82■■□□□ 1.24
MMP28-203ENST00000612672 KLHL35Q6PF15 583 aa22.82■■□□□ 1.24
MMP28-203ENST00000612672 MAP7D3Q8IWC1 876 aa22.82■■□□□ 1.24
MMP28-203ENST00000612672 RHOT1Q8IXI2 618 aa22.82■■□□□ 1.24
MMP28-203ENST00000612672 LILRA3Q8N6C8 439 aaPredicted RBP22.82■■□□□ 1.24
MMP28-203ENST00000612672 DDHD1Q8NEL9 900 aa22.82■■□□□ 1.24
MMP28-203ENST00000612672 INPP5DQ92835 1189 aa22.82■■□□□ 1.24
MMP28-203ENST00000612672 ZNF830Q96NB3 372 aaPredicted RBP22.82■■□□□ 1.24
MMP28-203ENST00000612672 NLNQ9BYT8 704 aa22.82■■□□□ 1.24
MMP28-203ENST00000612672 SLC29A3Q9BZD2 475 aa22.82■■□□□ 1.24
MMP28-203ENST00000612672 SLC24A2Q9UI40 661 aa22.82■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms