RNA–Protein interactions for RNA: ENST00000612199.4

SRGAP2B-204, Transcript of SLIT-ROBO Rho GTPase activating protein 2B, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SRGAP2B, Length 7,120 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP2B-204ENST00000612199 SYT12Q8IV01 421 aa9.38□□□□□ -0.91
SRGAP2B-204ENST00000612199 NPLOC4Q8TAT6 608 aa9.38□□□□□ -0.91
SRGAP2B-204ENST00000612199 PRR11Q96HE9 360 aaPredicted RBP9.38□□□□□ -0.91
SRGAP2B-204ENST00000612199 C17orf62Q9BQA9 187 aa9.38□□□□□ -0.91
SRGAP2B-204ENST00000612199 RHOJQ9H4E5 214 aa9.38□□□□□ -0.91
SRGAP2B-204ENST00000612199 DMAC2Q9NW81 257 aa9.38□□□□□ -0.91
SRGAP2B-204ENST00000612199 CMTM6Q9NX76 183 aa9.38□□□□□ -0.91
SRGAP2B-204ENST00000612199 TMEM216Q9P0N5 145 aa9.38□□□□□ -0.91
SRGAP2B-204ENST00000612199 MTF2Q9Y483 593 aaPredicted RBP9.38□□□□□ -0.91
SRGAP2B-204ENST00000612199 ENTPD5O75356 428 aa9.37□□□□□ -0.91
SRGAP2B-204ENST00000612199 SCGB1D2O95969 90 aa9.37□□□□□ -0.91
SRGAP2B-204ENST00000612199 CHRNB2P17787 502 aa9.37□□□□□ -0.91
SRGAP2B-204ENST00000612199 MYL12AP19105 171 aa9.37□□□□□ -0.91
SRGAP2B-204ENST00000612199 ICAM3P32942 547 aa9.37□□□□□ -0.91
SRGAP2B-204ENST00000612199 SLC5A3P53794 718 aa9.37□□□□□ -0.91
SRGAP2B-204ENST00000612199 PRKG2Q13237 762 aa9.37□□□□□ -0.91
SRGAP2B-204ENST00000612199 ARMCX4Q5H9R4 360 aa9.37□□□□□ -0.91
SRGAP2B-204ENST00000612199 LIPMQ5VYY2 423 aa9.37□□□□□ -0.91
SRGAP2B-204ENST00000612199 SULT1C3Q6IMI6 304 aa9.37□□□□□ -0.91
SRGAP2B-204ENST00000612199 TXNDC11Q6PKC3 985 aa9.37□□□□□ -0.91
SRGAP2B-204ENST00000612199 DHDDSQ86SQ9 333 aa9.37□□□□□ -0.91
SRGAP2B-204ENST00000612199 LDB1Q86U70 411 aaPredicted RBP9.37□□□□□ -0.91
SRGAP2B-204ENST00000612199 OXR1Q8N573 874 aa9.37□□□□□ -0.91
SRGAP2B-204ENST00000612199 SLC44A1Q8WWI5 657 aa9.37□□□□□ -0.91
SRGAP2B-204ENST00000612199 LIPHQ8WWY8 451 aa9.37□□□□□ -0.91
SRGAP2B-204ENST00000612199 PCED1BQ96HM7 432 aa9.37□□□□□ -0.91
SRGAP2B-204ENST00000612199 PPP3R2Q96LZ3 170 aa9.37□□□□□ -0.91
SRGAP2B-204ENST00000612199 QRFPRQ96P65 431 aa9.37□□□□□ -0.91
SRGAP2B-204ENST00000612199 GRIP2Q9C0E4 1043 aa9.37□□□□□ -0.91
SRGAP2B-204ENST00000612199 GNB4Q9HAV0 340 aa9.37□□□□□ -0.91
SRGAP2B-204ENST00000612199 VSX1Q9NZR4 365 aaPredicted RBP9.37□□□□□ -0.91
SRGAP2B-204ENST00000612199 AGO1Q9UL18 857 aaKnown RBP9.37□□□□□ -0.91
SRGAP2B-204ENST00000612199 PCDHGC3Q9UN70 934 aa9.37□□□□□ -0.91
SRGAP2B-204ENST00000612199 PMF1-BGLAPU3KQ54 211 aa9.37□□□□□ -0.91
SRGAP2B-204ENST00000612199 A8MUA0 341 aa9.37□□□□□ -0.91
SRGAP2B-204ENST00000612199 CXCL14O95715 111 aa9.37□□□□□ -0.91
SRGAP2B-204ENST00000612199 SYN1P17600 705 aa9.37□□□□□ -0.91
SRGAP2B-204ENST00000612199 ZNF280AP59817 542 aaPredicted RBP9.37□□□□□ -0.91
SRGAP2B-204ENST00000612199 SNRPD1P62314 119 aaKnown RBP9.37□□□□□ -0.91
SRGAP2B-204ENST00000612199 PMPCAQ10713 525 aa9.37□□□□□ -0.91
SRGAP2B-204ENST00000612199 SEMA5AQ13591 1074 aa9.37□□□□□ -0.91
SRGAP2B-204ENST00000612199 FAM151BQ6UXP7 276 aa9.37□□□□□ -0.91
SRGAP2B-204ENST00000612199 ANKS1BQ7Z6G8 1248 aa9.37□□□□□ -0.91
SRGAP2B-204ENST00000612199 SAPCD2Q86UD0 394 aa9.37□□□□□ -0.91
SRGAP2B-204ENST00000612199 C10orf107Q8IVU9 208 aa9.37□□□□□ -0.91
SRGAP2B-204ENST00000612199 ADHFE1Q8IWW8 467 aa9.37□□□□□ -0.91
SRGAP2B-204ENST00000612199 SPAG16Q8N0X2 631 aa9.37□□□□□ -0.91
SRGAP2B-204ENST00000612199 BHLHE22Q8NFJ8 381 aaPredicted RBP9.37□□□□□ -0.91
SRGAP2B-204ENST00000612199 SELENOMQ8WWX9 145 aa9.37□□□□□ -0.91
SRGAP2B-204ENST00000612199 SIPA1Q96FS4 1042 aa9.37□□□□□ -0.91
SRGAP2B-204ENST00000612199 TUBGCP5Q96RT8 1024 aa9.37□□□□□ -0.91
SRGAP2B-204ENST00000612199 KCTD15Q96SI1 283 aaPredicted RBP9.37□□□□□ -0.91
SRGAP2B-204ENST00000612199 PDCD1LG2Q9BQ51 273 aa9.37□□□□□ -0.91
SRGAP2B-204ENST00000612199 SPAG4Q9NPE6 437 aa9.37□□□□□ -0.91
SRGAP2B-204ENST00000612199 HCN2Q9UL51 889 aa9.37□□□□□ -0.91
SRGAP2B-204ENST00000612199 DUSP12Q9UNI6 340 aa9.37□□□□□ -0.91
SRGAP2B-204ENST00000612199 QSOX1O00391 747 aa9.37□□□□□ -0.91
SRGAP2B-204ENST00000612199 RPL17P18621 184 aaKnown RBP9.37□□□□□ -0.91
SRGAP2B-204ENST00000612199 CDKN2BP42772 138 aa9.37□□□□□ -0.91
SRGAP2B-204ENST00000612199 MYBPC3Q14896 1274 aa9.37□□□□□ -0.91
SRGAP2B-204ENST00000612199 IQCCQ4KMZ1 466 aa9.37□□□□□ -0.91
SRGAP2B-204ENST00000612199 PIK3R6Q5UE93 754 aa9.37□□□□□ -0.91
SRGAP2B-204ENST00000612199 CASP12Q6UXS9 341 aa9.37□□□□□ -0.91
SRGAP2B-204ENST00000612199 SLC24A5Q71RS6 500 aa9.37□□□□□ -0.91
SRGAP2B-204ENST00000612199 SLC26A9Q7LBE3 791 aa9.37□□□□□ -0.91
SRGAP2B-204ENST00000612199 CLEC4CQ8WTT0 213 aa9.37□□□□□ -0.91
SRGAP2B-204ENST00000612199 EQTNQ9NQ60 294 aa9.37□□□□□ -0.91
SRGAP2B-204ENST00000612199 CLDND1Q9NY35 253 aa9.37□□□□□ -0.91
SRGAP2B-204ENST00000612199 YARS2Q9Y2Z4 477 aaKnown RBP9.37□□□□□ -0.91
SRGAP2B-204ENST00000612199 A0A0G2JLL6 359 aaPredicted RBP9.37□□□□□ -0.91
SRGAP2B-204ENST00000612199 G3V2T6 193 aa9.37□□□□□ -0.91
SRGAP2B-204ENST00000612199 PTDSS1P48651 473 aaKnown RBP9.37□□□□□ -0.91
SRGAP2B-204ENST00000612199 TAS2R50P59544 299 aa9.37□□□□□ -0.91
SRGAP2B-204ENST00000612199 SSTP61278 116 aa9.37□□□□□ -0.91
SRGAP2B-204ENST00000612199 FNBP1LQ5T0N5 605 aa9.37□□□□□ -0.91
SRGAP2B-204ENST00000612199 INTS11Q5TA45 600 aaKnown RBP9.37□□□□□ -0.91
SRGAP2B-204ENST00000612199 PRRT2Q7Z6L0 340 aaPredicted RBP9.37□□□□□ -0.91
SRGAP2B-204ENST00000612199 CLVS1Q8IUQ0 354 aaPredicted RBP9.37□□□□□ -0.91
SRGAP2B-204ENST00000612199 UBE2E3Q969T4 207 aa9.37□□□□□ -0.91
SRGAP2B-204ENST00000612199 LRFN5Q96NI6 719 aa9.37□□□□□ -0.91
SRGAP2B-204ENST00000612199 WDR77Q9BQA1 342 aaPredicted RBP9.37□□□□□ -0.91
SRGAP2B-204ENST00000612199 CST11Q9H112 138 aa9.37□□□□□ -0.91
SRGAP2B-204ENST00000612199 ZNF180Q9UJW8 692 aa9.37□□□□□ -0.91
SRGAP2B-204ENST00000612199 FBXW2Q9UKT8 454 aa9.37□□□□□ -0.91
SRGAP2B-204ENST00000612199 PCDHA2Q9Y5H9 948 aa9.37□□□□□ -0.91
SRGAP2B-204ENST00000612199 TMEM88BA6NKF7 163 aa9.37□□□□□ -0.91
SRGAP2B-204ENST00000612199 C9J4A7 227 aa9.37□□□□□ -0.91
SRGAP2B-204ENST00000612199 SCGB2A1O75556 95 aa9.37□□□□□ -0.91
SRGAP2B-204ENST00000612199 OR5F1O95221 314 aa9.37□□□□□ -0.91
SRGAP2B-204ENST00000612199 APOC1P02654 83 aa9.37□□□□□ -0.91
SRGAP2B-204ENST00000612199 BPGMP07738 259 aa9.37□□□□□ -0.91
SRGAP2B-204ENST00000612199 RGS6P49758 472 aa9.37□□□□□ -0.91
SRGAP2B-204ENST00000612199 SLC14A2Q15849 920 aa9.37□□□□□ -0.91
SRGAP2B-204ENST00000612199 LINGO4Q6UY18 593 aa9.37□□□□□ -0.91
SRGAP2B-204ENST00000612199 ALYREFQ86V81 257 aaKnown RBP9.37□□□□□ -0.91
SRGAP2B-204ENST00000612199 CIR1Q86X95 450 aaPredicted RBP9.37□□□□□ -0.91
SRGAP2B-204ENST00000612199 SLC22A15Q8IZD6 547 aa9.37□□□□□ -0.91
SRGAP2B-204ENST00000612199 GTPBP3Q969Y2 492 aaKnown RBP9.37□□□□□ -0.91
SRGAP2B-204ENST00000612199 COQ8BQ96D53 544 aa9.37□□□□□ -0.91
SRGAP2B-204ENST00000612199 PCDH12Q9NPG4 1184 aa9.37□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms