RNA–Protein interactions for RNA: ENST00000611833.4

NEK3-206, Transcript of NIMA related kinase 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene NEK3, Length 2,345 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-206ENST00000611833 PCDHB1Q9Y5F3 818 aa16.99■□□□□ 0.31
NEK3-206ENST00000611833 ANAPC1Q9H1A4 1944 aa16.98■□□□□ 0.31
NEK3-206ENST00000611833 A0A087WXM4 84 aa16.98■□□□□ 0.31
NEK3-206ENST00000611833 ACOX3O15254 700 aa16.98■□□□□ 0.31
NEK3-206ENST00000611833 FZD6O60353 706 aa16.98■□□□□ 0.31
NEK3-206ENST00000611833 CNPP09543 421 aaKnown RBP16.98■□□□□ 0.31
NEK3-206ENST00000611833 CHRM1P11229 460 aaPredicted RBP16.98■□□□□ 0.31
NEK3-206ENST00000611833 HTR1EP28566 365 aa16.98■□□□□ 0.31
NEK3-206ENST00000611833 HTR6P50406 440 aa16.98■□□□□ 0.31
NEK3-206ENST00000611833 NOGQ13253 232 aa16.98■□□□□ 0.31
NEK3-206ENST00000611833 GTF2H2Q13888 395 aa16.98■□□□□ 0.31
NEK3-206ENST00000611833 PCBP2Q15366 365 aaKnown RBP eCLIP16.98■□□□□ 0.31
NEK3-206ENST00000611833 SLC36A3Q495N2 470 aa16.98■□□□□ 0.31
NEK3-206ENST00000611833 KCTD21Q4G0X4 260 aa16.98■□□□□ 0.31
NEK3-206ENST00000611833 GTF2H2CQ6P1K8 395 aa16.98■□□□□ 0.31
NEK3-206ENST00000611833 RALGPS2Q86X27 583 aaPredicted RBP16.98■□□□□ 0.31
NEK3-206ENST00000611833 PAF1Q8N7H5 531 aa16.98■□□□□ 0.31
NEK3-206ENST00000611833 OR4F6Q8NGB9 312 aa16.98■□□□□ 0.31
NEK3-206ENST00000611833 BIRC7Q96CA5 298 aa16.98■□□□□ 0.31
NEK3-206ENST00000611833 CCDC97Q96F63 343 aaPredicted RBP16.98■□□□□ 0.31
NEK3-206ENST00000611833 CLPBQ9H078 707 aa16.98■□□□□ 0.31
NEK3-206ENST00000611833 DYTNA2CJ06 578 aa16.98■□□□□ 0.31
NEK3-206ENST00000611833 PITPNM1O00562 1244 aa16.98■□□□□ 0.31
NEK3-206ENST00000611833 RAD51BO15315 384 aa16.98■□□□□ 0.31
NEK3-206ENST00000611833 BMP10O95393 424 aa16.98■□□□□ 0.31
NEK3-206ENST00000611833 LDLRP01130 860 aa16.98■□□□□ 0.31
NEK3-206ENST00000611833 MT-ND1P03886 318 aa16.98■□□□□ 0.31
NEK3-206ENST00000611833 ALPIP09923 528 aa16.98■□□□□ 0.31
NEK3-206ENST00000611833 G6PDP11413 515 aa16.98■□□□□ 0.31
NEK3-206ENST00000611833 ITGB6P18564 788 aa16.98■□□□□ 0.31
NEK3-206ENST00000611833 HMOX2P30519 316 aa16.98■□□□□ 0.31
NEK3-206ENST00000611833 HMGCLP35914 325 aa16.98■□□□□ 0.31
NEK3-206ENST00000611833 INO80DQ53TQ3 878 aaPredicted RBP16.98■□□□□ 0.31
NEK3-206ENST00000611833 FAM151BQ6UXP7 276 aa16.98■□□□□ 0.31
NEK3-206ENST00000611833 CERS6Q6ZMG9 384 aa16.98■□□□□ 0.31
NEK3-206ENST00000611833 PDLIM5Q96HC4 596 aaKnown RBP16.98■□□□□ 0.31
NEK3-206ENST00000611833 PPM1MQ96MI6 270 aa16.98■□□□□ 0.31
NEK3-206ENST00000611833 FEM1AQ9BSK4 669 aa16.98■□□□□ 0.31
NEK3-206ENST00000611833 CIPCQ9C0C6 399 aa16.98■□□□□ 0.31
NEK3-206ENST00000611833 RPF2Q9H7B2 306 aaKnown RBP16.98■□□□□ 0.31
NEK3-206ENST00000611833 HEBP1Q9NRV9 189 aa16.98■□□□□ 0.31
NEK3-206ENST00000611833 ZMYM5Q9UJ78 669 aa16.98■□□□□ 0.31
NEK3-206ENST00000611833 YIPF1Q9Y548 306 aa16.98■□□□□ 0.31
NEK3-206ENST00000611833 OR7A17O14581 309 aa16.97■□□□□ 0.31
NEK3-206ENST00000611833 CLOCKO15516 846 aa16.97■□□□□ 0.31
NEK3-206ENST00000611833 FFAR2O15552 330 aa16.97■□□□□ 0.31
NEK3-206ENST00000611833 ABLIM3O94929 683 aa16.97■□□□□ 0.31
NEK3-206ENST00000611833 GUCA1CO95843 209 aa16.97■□□□□ 0.31
NEK3-206ENST00000611833 C7P10643 843 aa16.97■□□□□ 0.31
NEK3-206ENST00000611833 BMP1P13497 986 aa16.97■□□□□ 0.31
NEK3-206ENST00000611833 ZNF7P17097 686 aaPredicted RBP16.97■□□□□ 0.31
NEK3-206ENST00000611833 CDK9P50750 372 aaKnown RBP16.97■□□□□ 0.31
NEK3-206ENST00000611833 ESRRGP62508 458 aa16.97■□□□□ 0.31
NEK3-206ENST00000611833 AP5B1Q2VPB7 878 aa16.97■□□□□ 0.31
NEK3-206ENST00000611833 ARMC12Q5T9G4 340 aa16.97■□□□□ 0.31
NEK3-206ENST00000611833 GLYATQ6IB77 296 aa16.97■□□□□ 0.31
NEK3-206ENST00000611833 CYP20A1Q6UW02 462 aa16.97■□□□□ 0.31
NEK3-206ENST00000611833 ZNF783Q6ZMS7 281 aa16.97■□□□□ 0.31
NEK3-206ENST00000611833 PAPD5Q8NDF8 572 aaKnown RBP16.97■□□□□ 0.31
NEK3-206ENST00000611833 MAGEE2Q8TD90 523 aaPredicted RBP16.97■□□□□ 0.31
NEK3-206ENST00000611833 IGSF21Q96ID5 467 aa16.97■□□□□ 0.31
NEK3-206ENST00000611833 VPS50Q96JG6 964 aa16.97■□□□□ 0.31
NEK3-206ENST00000611833 NSMCE2Q96MF7 247 aa16.97■□□□□ 0.31
NEK3-206ENST00000611833 RNF145Q96MT1 663 aa16.97■□□□□ 0.31
NEK3-206ENST00000611833 IPPKQ9H8X2 491 aa16.97■□□□□ 0.31
NEK3-206ENST00000611833 MAGEE1Q9HCI5 957 aa16.97■□□□□ 0.31
NEK3-206ENST00000611833 STOML2Q9UJZ1 356 aa16.97■□□□□ 0.31
NEK3-206ENST00000611833 OTCP00480 354 aa16.97■□□□□ 0.31
NEK3-206ENST00000611833 HRH2P25021 359 aa16.97■□□□□ 0.31
NEK3-206ENST00000611833 OR4D2P58180 307 aa16.97■□□□□ 0.31
NEK3-206ENST00000611833 SBSNQ6UWP8 590 aa16.97■□□□□ 0.31
NEK3-206ENST00000611833 ARHGAP22Q7Z5H3 698 aa16.97■□□□□ 0.31
NEK3-206ENST00000611833 MILR1Q7Z6M3 343 aa16.97■□□□□ 0.31
NEK3-206ENST00000611833 SERPINA9Q86WD7 417 aa16.97■□□□□ 0.31
NEK3-206ENST00000611833 DHRSXQ8N5I4 330 aa16.97■□□□□ 0.31
NEK3-206ENST00000611833 DPP10Q8N608 796 aa16.97■□□□□ 0.31
NEK3-206ENST00000611833 WFDC5Q8TCV5 224 aa16.97■□□□□ 0.31
NEK3-206ENST00000611833 OSCP1Q8WVF1 389 aa16.97■□□□□ 0.31
NEK3-206ENST00000611833 FBXL20Q96IG2 436 aa16.97■□□□□ 0.31
NEK3-206ENST00000611833 SLC22A12Q96S37 553 aa16.97■□□□□ 0.31
NEK3-206ENST00000611833 CHID1Q9BWS9 393 aa16.97■□□□□ 0.31
NEK3-206ENST00000611833 OCEL1Q9H607 264 aa16.97■□□□□ 0.31
NEK3-206ENST00000611833 SMPD3Q9NY59 655 aaPredicted RBP16.97■□□□□ 0.31
NEK3-206ENST00000611833 TUBA8Q9NY65 449 aaPredicted RBP16.97■□□□□ 0.31
NEK3-206ENST00000611833 ATXN10Q9UBB4 475 aa16.97■□□□□ 0.31
NEK3-206ENST00000611833 VPS51Q9UID3 782 aa16.97■□□□□ 0.31
NEK3-206ENST00000611833 PTBP2Q9UKA9 531 aaKnown RBP16.97■□□□□ 0.31
NEK3-206ENST00000611833 POLR3HQ9Y535 204 aaPredicted RBP16.97■□□□□ 0.31
NEK3-206ENST00000611833 OR51B4Q9Y5P0 310 aa16.97■□□□□ 0.31
NEK3-206ENST00000611833 FADS3Q9Y5Q0 445 aa16.97■□□□□ 0.31
NEK3-206ENST00000611833 LSM1O15116 133 aaKnown RBP16.96■□□□□ 0.31
NEK3-206ENST00000611833 PRAMEF1O95521 474 aa16.96■□□□□ 0.31
NEK3-206ENST00000611833 CLIC3O95833 236 aa16.96■□□□□ 0.31
NEK3-206ENST00000611833 MBL2P11226 248 aaPredicted RBP16.96■□□□□ 0.31
NEK3-206ENST00000611833 RPS9P46781 194 aaKnown RBP16.96■□□□□ 0.31
NEK3-206ENST00000611833 RGS4P49798 205 aa16.96■□□□□ 0.31
NEK3-206ENST00000611833 SMAD3P84022 425 aaKnown RBP16.96■□□□□ 0.31
NEK3-206ENST00000611833 ABRAXAS2Q15018 415 aa16.96■□□□□ 0.31
NEK3-206ENST00000611833 GPR141Q7Z602 305 aa16.96■□□□□ 0.31
NEK3-206ENST00000611833 MYO19Q96H55 970 aa16.96■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 76.3 ms