RNA–Protein interactions for RNA: ENST00000610828.4

NEK3-205, Transcript of NIMA related kinase 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene NEK3, Length 2,396 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-205ENST00000610828 ZNF641Q96N77 438 aaPredicted RBP13.41□□□□□ -0.26
NEK3-205ENST00000610828 MCCC1Q96RQ3 725 aaPredicted RBP13.41□□□□□ -0.26
NEK3-205ENST00000610828 COPS8Q99627 209 aa13.41□□□□□ -0.26
NEK3-205ENST00000610828 CEP44Q9C0F1 390 aa13.41□□□□□ -0.26
NEK3-205ENST00000610828 AIG1Q9NVV5 245 aa13.41□□□□□ -0.26
NEK3-205ENST00000610828 ELOVL2Q9NXB9 296 aa13.41□□□□□ -0.26
NEK3-205ENST00000610828 B4GALT6Q9UBX8 382 aa13.41□□□□□ -0.26
NEK3-205ENST00000610828 CD300AQ9UGN4 299 aa13.41□□□□□ -0.26
NEK3-205ENST00000610828 HCFC2Q9Y5Z7 792 aa13.41□□□□□ -0.26
NEK3-205ENST00000610828 DNAJA2O60884 412 aa13.4□□□□□ -0.26
NEK3-205ENST00000610828 UBTFL6P0CB48 400 aaPredicted RBP13.4□□□□□ -0.26
NEK3-205ENST00000610828 VCLP18206 1134 aa13.4□□□□□ -0.26
NEK3-205ENST00000610828 GDF5P43026 501 aa13.4□□□□□ -0.26
NEK3-205ENST00000610828 PTPN5P54829 565 aa13.4□□□□□ -0.26
NEK3-205ENST00000610828 KCNK10P57789 538 aa13.4□□□□□ -0.26
NEK3-205ENST00000610828 ERVK-8P63133 956 aa13.4□□□□□ -0.26
NEK3-205ENST00000610828 PPIGQ13427 754 aaKnown RBP eCLIP13.4□□□□□ -0.262e-7■■■□□ 17.9
NEK3-205ENST00000610828 ADGRE1Q14246 886 aa13.4□□□□□ -0.26
NEK3-205ENST00000610828 TTLL9Q3SXZ7 439 aa13.4□□□□□ -0.26
NEK3-205ENST00000610828 RARS2Q5T160 578 aaKnown RBP13.4□□□□□ -0.26
NEK3-205ENST00000610828 ZNF697Q5TEC3 545 aa13.4□□□□□ -0.26
NEK3-205ENST00000610828 ELMSAN1Q6PJG2 1045 aa13.4□□□□□ -0.26
NEK3-205ENST00000610828 CYP2R1Q6VVX0 501 aa13.4□□□□□ -0.26
NEK3-205ENST00000610828 ADIPOR2Q86V24 386 aa13.4□□□□□ -0.26
NEK3-205ENST00000610828 LILRA2Q8N149 483 aa13.4□□□□□ -0.26
NEK3-205ENST00000610828 ICA1LQ8NDH6 482 aa13.4□□□□□ -0.26
NEK3-205ENST00000610828 VPS33AQ96AX1 596 aa13.4□□□□□ -0.26
NEK3-205ENST00000610828 SPDL1Q96EA4 605 aa13.4□□□□□ -0.26
NEK3-205ENST00000610828 CCT7Q99832 543 aa13.4□□□□□ -0.26
NEK3-205ENST00000610828 ZDHHC7Q9NXF8 308 aa13.4□□□□□ -0.26
NEK3-205ENST00000610828 ZDHHC3Q9NYG2 299 aa13.4□□□□□ -0.26
NEK3-205ENST00000610828 WWOXQ9NZC7 414 aa13.4□□□□□ -0.26
NEK3-205ENST00000610828 DLGAP2Q9P1A6 1054 aa13.4□□□□□ -0.26
NEK3-205ENST00000610828 CD84Q9UIB8 345 aa13.4□□□□□ -0.26
NEK3-205ENST00000610828 ZMYM5Q9UJ78 669 aa13.4□□□□□ -0.26
NEK3-205ENST00000610828 PTBP2Q9UKA9 531 aaKnown RBP13.4□□□□□ -0.26
NEK3-205ENST00000610828 LZTS1Q9Y250 596 aa13.4□□□□□ -0.26
NEK3-205ENST00000610828 DTNAQ9Y4J8 743 aa13.4□□□□□ -0.26
NEK3-205ENST00000610828 WNT6Q9Y6F9 365 aa13.4□□□□□ -0.26
NEK3-205ENST00000610828 TAPBPO15533 448 aa13.4□□□□□ -0.26
NEK3-205ENST00000610828 SYNCRIPO60506 623 aaKnown RBP13.4□□□□□ -0.26
NEK3-205ENST00000610828 OTCP00480 354 aa13.4□□□□□ -0.26
NEK3-205ENST00000610828 C1SP09871 688 aa13.4□□□□□ -0.26
NEK3-205ENST00000610828 EPCAMP16422 314 aa13.4□□□□□ -0.26
NEK3-205ENST00000610828 RECQLP46063 649 aaPredicted RBP13.4□□□□□ -0.26
NEK3-205ENST00000610828 HTR6P50406 440 aa13.4□□□□□ -0.26
NEK3-205ENST00000610828 UFM1P61960 85 aa13.4□□□□□ -0.26
NEK3-205ENST00000610828 FPGSQ05932 587 aa13.4□□□□□ -0.26
NEK3-205ENST00000610828 CAPRIN1Q14444 709 aaKnown RBP13.4□□□□□ -0.26
NEK3-205ENST00000610828 C6orf136Q5SQH8 315 aa13.4□□□□□ -0.26
NEK3-205ENST00000610828 Q6ZSR9 355 aa13.4□□□□□ -0.26
NEK3-205ENST00000610828 OR2A12Q8NGT7 310 aa13.4□□□□□ -0.26
NEK3-205ENST00000610828 SPPL3Q8TCT6 385 aa13.4□□□□□ -0.26
NEK3-205ENST00000610828 GATA6Q92908 595 aa13.4□□□□□ -0.26
NEK3-205ENST00000610828 ZSWIM3Q96MP5 696 aa13.4□□□□□ -0.26
NEK3-205ENST00000610828 HOPXQ9BPY8 73 aaPredicted RBP13.4□□□□□ -0.26
NEK3-205ENST00000610828 PRKAG2Q9UGJ0 569 aa13.4□□□□□ -0.26
NEK3-205ENST00000610828 SCOCQ9UIL1 159 aa13.4□□□□□ -0.26
NEK3-205ENST00000610828 RIMS3Q9UJD0 308 aa13.4□□□□□ -0.26
NEK3-205ENST00000610828 ANGPTL3Q9Y5C1 460 aa13.4□□□□□ -0.26
NEK3-205ENST00000610828 PRSS51A0A1B0GVH4 220 aa13.39□□□□□ -0.27
NEK3-205ENST00000610828 MAGEA13PA6NCF6 341 aa13.39□□□□□ -0.27
NEK3-205ENST00000610828 PEX1O43933 1283 aa13.39□□□□□ -0.27
NEK3-205ENST00000610828 SLC22A3O75751 556 aa13.39□□□□□ -0.27
NEK3-205ENST00000610828 WEE1P30291 646 aa13.39□□□□□ -0.27
NEK3-205ENST00000610828 HMOX2P30519 316 aa13.39□□□□□ -0.27
NEK3-205ENST00000610828 POLR2LP62875 67 aaKnown RBP13.39□□□□□ -0.27
NEK3-205ENST00000610828 B4GALNT1Q00973 533 aa13.39□□□□□ -0.27
NEK3-205ENST00000610828 TRAP1Q12931 704 aaKnown RBP13.39□□□□□ -0.27
NEK3-205ENST00000610828 CBX2Q14781 532 aaPredicted RBP13.39□□□□□ -0.27
NEK3-205ENST00000610828 ZNF77Q15935 545 aa13.39□□□□□ -0.27
NEK3-205ENST00000610828 C6orf10Q5SRN2 563 aa13.39□□□□□ -0.27
NEK3-205ENST00000610828 IL23RQ5VWK5 629 aa13.39□□□□□ -0.27
NEK3-205ENST00000610828 TMEM215Q68D42 235 aa13.39□□□□□ -0.27
NEK3-205ENST00000610828 GDPD4Q6W3E5 623 aa13.39□□□□□ -0.27
NEK3-205ENST00000610828 SPRED2Q7Z698 418 aa13.39□□□□□ -0.27
NEK3-205ENST00000610828 MILR1Q7Z6M3 343 aa13.39□□□□□ -0.27
NEK3-205ENST00000610828 CYB5D2Q8WUJ1 264 aa13.39□□□□□ -0.27
NEK3-205ENST00000610828 SORCS1Q8WY21 1168 aa13.39□□□□□ -0.27
NEK3-205ENST00000610828 ING5Q8WYH8 240 aa13.39□□□□□ -0.27
NEK3-205ENST00000610828 NR1H4Q96RI1 486 aaPredicted RBP13.39□□□□□ -0.27
NEK3-205ENST00000610828 PKP2Q99959 881 aa13.39□□□□□ -0.27
NEK3-205ENST00000610828 GPATCH1Q9BRR8 931 aaKnown RBP13.39□□□□□ -0.27
NEK3-205ENST00000610828 BRINP2Q9C0B6 783 aa13.39□□□□□ -0.27
NEK3-205ENST00000610828 VCXQ9H320 206 aa13.39□□□□□ -0.27
NEK3-205ENST00000610828 GID8Q9NWU2 228 aa13.39□□□□□ -0.27
NEK3-205ENST00000610828 TBC1D14Q9P2M4 693 aa13.39□□□□□ -0.27
NEK3-205ENST00000610828 GMPR2Q9P2T1 348 aaKnown RBP13.39□□□□□ -0.27
NEK3-205ENST00000610828 C5orf42Q9H799 3197 aa13.39□□□□□ -0.27
NEK3-205ENST00000610828 DPPA5A6NC42 116 aa13.39□□□□□ -0.27
NEK3-205ENST00000610828 NME4O00746 187 aa13.39□□□□□ -0.27
NEK3-205ENST00000610828 STAMBPO95630 424 aa13.39□□□□□ -0.27
NEK3-205ENST00000610828 UQCRBP14927 111 aa13.39□□□□□ -0.27
NEK3-205ENST00000610828 POLR2EP19388 210 aaKnown RBP13.39□□□□□ -0.27
NEK3-205ENST00000610828 IRS1P35568 1242 aa13.39□□□□□ -0.27
NEK3-205ENST00000610828 SPINT3P49223 89 aa13.39□□□□□ -0.27
NEK3-205ENST00000610828 IRX1P78414 480 aaPredicted RBP13.39□□□□□ -0.27
NEK3-205ENST00000610828 CREB5Q02930 508 aa13.39□□□□□ -0.27
NEK3-205ENST00000610828 TRAF3Q13114 568 aa13.39□□□□□ -0.27
NEK3-205ENST00000610828 MED21Q13503 144 aa13.39□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms