RNA–Protein interactions for RNA: ENST00000607805.5

NECAB3-222, Transcript of N-terminal EF-hand calcium binding protein 3, human

TSL 5

Gene NECAB3, Length 969 nt, Biotype nonsense mediated decay.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NECAB3-222	ENST00000607805	ADAMTS17	Q8TE56	1095 aa		20.54	■□□□□ 0.88
NECAB3-222	ENST00000607805	ZNF501	Q96CX3	271 aa	Predicted RBP	20.54	■□□□□ 0.88
NECAB3-222	ENST00000607805	UGT1A7	Q9HAW7	530 aa		20.54	■□□□□ 0.88
NECAB3-222	ENST00000607805	UGT1A10	Q9HAW8	530 aa		20.54	■□□□□ 0.88
NECAB3-222	ENST00000607805	UGT1A8	Q9HAW9	530 aa		20.54	■□□□□ 0.88
NECAB3-222	ENST00000607805	IGF2BP1	Q9NZI8	577 aa	Known RBP eCLIP	20.54	■□□□□ 0.88
NECAB3-222	ENST00000607805	PSMD13	Q9UNM6	376 aa		20.54	■□□□□ 0.88
NECAB3-222	ENST00000607805	SORBS2	O94875	1100 aa	Known RBP	20.53	■□□□□ 0.88
NECAB3-222	ENST00000607805	LPO	P22079	712 aa	Predicted RBP	20.53	■□□□□ 0.88
NECAB3-222	ENST00000607805	SPAM1	P38567	509 aa		20.53	■□□□□ 0.88
NECAB3-222	ENST00000607805	ARHGAP25	P42331	645 aa		20.53	■□□□□ 0.88
NECAB3-222	ENST00000607805	WNT3A	P56704	352 aa		20.53	■□□□□ 0.88
NECAB3-222	ENST00000607805	TUBB4B	P68371	445 aa		20.53	■□□□□ 0.88
NECAB3-222	ENST00000607805	TUBB2A	Q13885	445 aa		20.53	■□□□□ 0.88
NECAB3-222	ENST00000607805	NFE2L1	Q14494	772 aa		20.53	■□□□□ 0.88
NECAB3-222	ENST00000607805	TAZ	Q16635	292 aa		20.53	■□□□□ 0.88
NECAB3-222	ENST00000607805	SIRPB2	Q5JXA9	342 aa		20.53	■□□□□ 0.88
NECAB3-222	ENST00000607805	LDLRAP1	Q5SW96	308 aa		20.53	■□□□□ 0.88
NECAB3-222	ENST00000607805	ZDHHC20	Q5W0Z9	365 aa		20.53	■□□□□ 0.88
NECAB3-222	ENST00000607805	TMEM220	Q6QAJ8	160 aa		20.53	■□□□□ 0.88
NECAB3-222	ENST00000607805	SLC38A9	Q8NBW4	561 aa		20.53	■□□□□ 0.88
NECAB3-222	ENST00000607805	CPT1C	Q8TCG5	803 aa		20.53	■□□□□ 0.88
NECAB3-222	ENST00000607805	MRGPRX2	Q96LB1	330 aa		20.53	■□□□□ 0.88
NECAB3-222	ENST00000607805	TUBB2B	Q9BVA1	445 aa		20.53	■□□□□ 0.88
NECAB3-222	ENST00000607805	MAK16	Q9BXY0	300 aa	Known RBP	20.53	■□□□□ 0.88
NECAB3-222	ENST00000607805	LRRC4C	Q9HCJ2	640 aa		20.53	■□□□□ 0.88
NECAB3-222	ENST00000607805	SMOX	Q9NWM0	555 aa		20.53	■□□□□ 0.88
NECAB3-222	ENST00000607805	FAM153A	Q9UHL3	310 aa		20.53	■□□□□ 0.88
NECAB3-222	ENST00000607805	PCM1	Q15154	2024 aa		20.53	■□□□□ 0.88
NECAB3-222	ENST00000607805	CEACAM4	O75871	244 aa		20.52	■□□□□ 0.88
NECAB3-222	ENST00000607805	MTHFD1	P11586	935 aa	Known RBP	20.52	■□□□□ 0.88
NECAB3-222	ENST00000607805	GNLY	P22749	145 aa		20.52	■□□□□ 0.88
NECAB3-222	ENST00000607805	CHRNA4	P43681	627 aa		20.52	■□□□□ 0.88
NECAB3-222	ENST00000607805	HSD11B2	P80365	405 aa		20.52	■□□□□ 0.88
NECAB3-222	ENST00000607805	GPS2	Q13227	327 aa		20.52	■□□□□ 0.88
NECAB3-222	ENST00000607805	NADK2	Q4G0N4	442 aa		20.52	■□□□□ 0.88
NECAB3-222	ENST00000607805	C4orf17	Q53FE4	359 aa		20.52	■□□□□ 0.88
NECAB3-222	ENST00000607805	DNTTIP2	Q5QJE6	756 aa	Known RBP	20.52	■□□□□ 0.88
NECAB3-222	ENST00000607805	GPRC6A	Q5T6X5	926 aa		20.52	■□□□□ 0.88
NECAB3-222	ENST00000607805	IZUMO3	Q5VZ72	239 aa		20.52	■□□□□ 0.88
NECAB3-222	ENST00000607805	ZFPM2	Q8WW38	1151 aa		20.52	■□□□□ 0.88
NECAB3-222	ENST00000607805	TTC25	Q96NG3	672 aa		20.52	■□□□□ 0.88
NECAB3-222	ENST00000607805	INSM2	Q96T92	566 aa	Predicted RBP	20.52	■□□□□ 0.88
NECAB3-222	ENST00000607805	ZCCHC2	Q9C0B9	1178 aa	Known RBP	20.52	■□□□□ 0.88
NECAB3-222	ENST00000607805	LATS2	Q9NRM7	1088 aa		20.52	■□□□□ 0.88
NECAB3-222	ENST00000607805	FARSA	Q9Y285	508 aa	Known RBP	20.52	■□□□□ 0.88
NECAB3-222	ENST00000607805	BTRC	Q9Y297	605 aa		20.52	■□□□□ 0.88
NECAB3-222	ENST00000607805	MAP4K5	Q9Y4K4	846 aa		20.52	■□□□□ 0.88
NECAB3-222	ENST00000607805	NUP210L	Q5VU65	1888 aa		20.52	■□□□□ 0.87
NECAB3-222	ENST00000607805	SSU72P8	A0A1W2PR75	194 aa		20.51	■□□□□ 0.87
NECAB3-222	ENST00000607805	TTLL8	A6PVC2	850 aa		20.51	■□□□□ 0.87
NECAB3-222	ENST00000607805	CPNE3	O75131	537 aa	Known RBP	20.51	■□□□□ 0.87
NECAB3-222	ENST00000607805	NFKB1	P19838	968 aa		20.51	■□□□□ 0.87
NECAB3-222	ENST00000607805	RPS15	P62841	145 aa	Known RBP	20.51	■□□□□ 0.87
NECAB3-222	ENST00000607805	CHAF1B	Q13112	559 aa		20.51	■□□□□ 0.87
NECAB3-222	ENST00000607805	MFSD7	Q6UXD7	560 aa		20.51	■□□□□ 0.87
NECAB3-222	ENST00000607805	FAM151B	Q6UXP7	276 aa		20.51	■□□□□ 0.87
NECAB3-222	ENST00000607805	RFX6	Q8HWS3	928 aa		20.51	■□□□□ 0.87
NECAB3-222	ENST00000607805	CARF	Q8N187	725 aa		20.51	■□□□□ 0.87
NECAB3-222	ENST00000607805	OR8K5	Q8NH50	307 aa		20.51	■□□□□ 0.87
NECAB3-222	ENST00000607805	RNF25	Q96BH1	459 aa	Predicted RBP	20.51	■□□□□ 0.87
NECAB3-222	ENST00000607805	OXNAD1	Q96HP4	312 aa	Predicted RBP	20.51	■□□□□ 0.87
NECAB3-222	ENST00000607805	LRFN5	Q96NI6	719 aa		20.51	■□□□□ 0.87
NECAB3-222	ENST00000607805	DNAJC7	Q99615	494 aa		20.51	■□□□□ 0.87
NECAB3-222	ENST00000607805	SLC25A23	Q9BV35	468 aa		20.51	■□□□□ 0.87
NECAB3-222	ENST00000607805	KCND1	Q9NSA2	647 aa		20.51	■□□□□ 0.87
NECAB3-222	ENST00000607805	HRASLS2	Q9NWW9	162 aa		20.51	■□□□□ 0.87
NECAB3-222	ENST00000607805	HACD3	Q9P035	362 aa		20.51	■□□□□ 0.87
NECAB3-222	ENST00000607805	SAE1	Q9UBE0	346 aa	Predicted RBP	20.51	■□□□□ 0.87
NECAB3-222	ENST00000607805	CFAP20	Q9Y6A4	193 aa	Known RBP	20.51	■□□□□ 0.87
NECAB3-222	ENST00000607805	ABCA12	Q86UK0	2595 aa		20.5	■□□□□ 0.87
NECAB3-222	ENST00000607805	SVIL	O95425	2214 aa		20.5	■□□□□ 0.87
NECAB3-222	ENST00000607805	ZGRF1	Q86YA3	2104 aa		20.5	■□□□□ 0.87
NECAB3-222	ENST00000607805	GLYATL1P3	A0A0U1RQE8	302 aa		20.5	■□□□□ 0.87
NECAB3-222	ENST00000607805	OR2AG2	A6NM03	316 aa		20.5	■□□□□ 0.87
NECAB3-222	ENST00000607805	VPS4B	O75351	444 aa		20.5	■□□□□ 0.87
NECAB3-222	ENST00000607805	SCRG1	O75711	98 aa		20.5	■□□□□ 0.87
NECAB3-222	ENST00000607805	ZBTB11	O95625	1053 aa	Predicted RBP	20.5	■□□□□ 0.87
NECAB3-222	ENST00000607805	KRT1	P04264	644 aa		20.5	■□□□□ 0.87
NECAB3-222	ENST00000607805	CDKN2B	P42772	138 aa		20.5	■□□□□ 0.87
NECAB3-222	ENST00000607805	NR2C2	P49116	596 aa		20.5	■□□□□ 0.87
NECAB3-222	ENST00000607805	PGD	P52209	483 aa		20.5	■□□□□ 0.87
NECAB3-222	ENST00000607805	DYNLT1	P63172	113 aa		20.5	■□□□□ 0.87
NECAB3-222	ENST00000607805	PLCL1	Q15111	1095 aa		20.5	■□□□□ 0.87
NECAB3-222	ENST00000607805	SLC1A5	Q15758	541 aa		20.5	■□□□□ 0.87
NECAB3-222	ENST00000607805	GPR19	Q15760	415 aa		20.5	■□□□□ 0.87
NECAB3-222	ENST00000607805	HIST2H2BC	Q6DN03	193 aa		20.5	■□□□□ 0.87
NECAB3-222	ENST00000607805	LCN10	Q6JVE6	187 aa		20.5	■□□□□ 0.87
NECAB3-222	ENST00000607805	FCRL5	Q96RD9	977 aa		20.5	■□□□□ 0.87
NECAB3-222	ENST00000607805	ING2	Q9H160	280 aa		20.5	■□□□□ 0.87
NECAB3-222	ENST00000607805	IFNK	Q9P0W0	207 aa		20.5	■□□□□ 0.87
NECAB3-222	ENST00000607805	PLEKHB1	Q9UF11	243 aa	Predicted RBP	20.5	■□□□□ 0.87
NECAB3-222	ENST00000607805	SLC24A2	Q9UI40	661 aa		20.5	■□□□□ 0.87
NECAB3-222	ENST00000607805	VPS4A	Q9UN37	437 aa		20.5	■□□□□ 0.87
NECAB3-222	ENST00000607805	UBA6	A0AVT1	1052 aa	Predicted RBP	20.49	■□□□□ 0.87
NECAB3-222	ENST00000607805	MGAT4D	A6NG13	374 aa		20.49	■□□□□ 0.87
NECAB3-222	ENST00000607805	CAPN1	P07384	714 aa		20.49	■□□□□ 0.87
NECAB3-222	ENST00000607805	PECAM1	P16284	738 aa	Predicted RBP	20.49	■□□□□ 0.87
NECAB3-222	ENST00000607805	KPNA2	P52292	529 aa	Known RBP	20.49	■□□□□ 0.87
NECAB3-222	ENST00000607805	TPM4	P67936	248 aa		20.49	■□□□□ 0.87

Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms