RNA–Protein interactions for RNA: ENST00000606000.1

CTSA-210, Transcript of cathepsin A, humanhuman

TSL 3

Gene CTSA, Length 644 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-210ENST00000606000 CCDC162PA2VCL2 907 aa12.03□□□□□ -0.48
CTSA-210ENST00000606000 MROH6A6NGR9 719 aa12.03□□□□□ -0.48
CTSA-210ENST00000606000 E7EVH7 732 aa12.03□□□□□ -0.48
CTSA-210ENST00000606000 H7C0S8 307 aa12.03□□□□□ -0.48
CTSA-210ENST00000606000 CAPN5O15484 640 aaPredicted RBP12.03□□□□□ -0.48
CTSA-210ENST00000606000 PSMD3O43242 534 aa12.03□□□□□ -0.48
CTSA-210ENST00000606000 CEP104O60308 925 aa12.03□□□□□ -0.48
CTSA-210ENST00000606000 SUN1O94901 812 aa12.03□□□□□ -0.48
CTSA-210ENST00000606000 C9P02748 559 aa12.03□□□□□ -0.48
CTSA-210ENST00000606000 POLBP06746 335 aa12.03□□□□□ -0.48
CTSA-210ENST00000606000 MTHFD1P11586 935 aaKnown RBP12.03□□□□□ -0.48
CTSA-210ENST00000606000 AMD1P17707 334 aa12.03□□□□□ -0.48
CTSA-210ENST00000606000 MSNP26038 577 aaKnown RBP12.03□□□□□ -0.48
CTSA-210ENST00000606000 STIP1P31948 543 aaKnown RBP12.03□□□□□ -0.48
CTSA-210ENST00000606000 FDFT1P37268 417 aa12.03□□□□□ -0.48
CTSA-210ENST00000606000 CAPZBP47756 277 aa12.03□□□□□ -0.48
CTSA-210ENST00000606000 LMAN1P49257 510 aa12.03□□□□□ -0.48
CTSA-210ENST00000606000 TERF1P54274 439 aa12.03□□□□□ -0.48
CTSA-210ENST00000606000 VAC14Q08AM6 782 aa12.03□□□□□ -0.48
CTSA-210ENST00000606000 SEMA5AQ13591 1074 aa12.03□□□□□ -0.48
CTSA-210ENST00000606000 CCNG2Q16589 344 aa12.03□□□□□ -0.48
CTSA-210ENST00000606000 DBN1Q16643 649 aa12.03□□□□□ -0.48
CTSA-210ENST00000606000 METRNLQ641Q3 311 aa12.03□□□□□ -0.48
CTSA-210ENST00000606000 PPP1R21Q6ZMI0 780 aa12.03□□□□□ -0.48
CTSA-210ENST00000606000 FAM92BQ6ZTR7 304 aa12.03□□□□□ -0.48
CTSA-210ENST00000606000 TAS2R42Q7RTR8 314 aa12.03□□□□□ -0.48
CTSA-210ENST00000606000 DTX1Q86Y01 620 aa12.03□□□□□ -0.48
CTSA-210ENST00000606000 CLDN19Q8N6F1 224 aa12.03□□□□□ -0.48
CTSA-210ENST00000606000 CCDC89Q8N998 374 aa12.03□□□□□ -0.48
CTSA-210ENST00000606000 DNAAF3Q8N9W5 541 aa12.03□□□□□ -0.48
CTSA-210ENST00000606000 AVL9Q8NBF6 648 aa12.03□□□□□ -0.48
CTSA-210ENST00000606000 TRIM58Q8NG06 486 aa12.03□□□□□ -0.48
CTSA-210ENST00000606000 OR13J1Q8NGT2 312 aa12.03□□□□□ -0.48
CTSA-210ENST00000606000 STYXQ8WUJ0 223 aa12.03□□□□□ -0.48
CTSA-210ENST00000606000 DCUN1D1Q96GG9 259 aa12.03□□□□□ -0.48
CTSA-210ENST00000606000 C9orf72Q96LT7 481 aa12.03□□□□□ -0.48
CTSA-210ENST00000606000 C12orf66Q96MD2 445 aa12.03□□□□□ -0.48
CTSA-210ENST00000606000 TAAR9Q96RI9 348 aa12.03□□□□□ -0.48
CTSA-210ENST00000606000 NRTNQ99748 197 aa12.03□□□□□ -0.48
CTSA-210ENST00000606000 KCNF1Q9H3M0 494 aa12.03□□□□□ -0.48
CTSA-210ENST00000606000 ZDHHC3Q9NYG2 299 aa12.03□□□□□ -0.48
CTSA-210ENST00000606000 SMARCAL1Q9NZC9 954 aa12.03□□□□□ -0.48
CTSA-210ENST00000606000 DNMT3AQ9Y6K1 912 aaPredicted RBP12.03□□□□□ -0.48
CTSA-210ENST00000606000 PRSS21Q9Y6M0 314 aa12.03□□□□□ -0.48
CTSA-210ENST00000606000 ANKRD11Q6UB99 2663 aaPredicted RBP12.03□□□□□ -0.48
CTSA-210ENST00000606000 IGLV3-16A0A075B6K0 115 aa12.02□□□□□ -0.49
CTSA-210ENST00000606000 K7ENP7 123 aa12.02□□□□□ -0.49
CTSA-210ENST00000606000 KCNJ13O60928 360 aa12.02□□□□□ -0.49
CTSA-210ENST00000606000 APRTP07741 180 aa12.02□□□□□ -0.49
CTSA-210ENST00000606000 ATP1B2P14415 290 aaPredicted RBP12.02□□□□□ -0.49
CTSA-210ENST00000606000 FOXN2P32314 431 aa12.02□□□□□ -0.49
CTSA-210ENST00000606000 PREPP48147 710 aa12.02□□□□□ -0.49
CTSA-210ENST00000606000 SEPHS1P49903 392 aa12.02□□□□□ -0.49
CTSA-210ENST00000606000 UCNP55089 124 aa12.02□□□□□ -0.49
CTSA-210ENST00000606000 SH3BP2P78314 561 aa12.02□□□□□ -0.49
CTSA-210ENST00000606000 CRADDP78560 199 aa12.02□□□□□ -0.49
CTSA-210ENST00000606000 BASP1P80723 227 aaKnown RBP12.02□□□□□ -0.49
CTSA-210ENST00000606000 CDH17Q12864 832 aa12.02□□□□□ -0.49
CTSA-210ENST00000606000 SEMA3AQ14563 771 aa12.02□□□□□ -0.49
CTSA-210ENST00000606000 ZNF658BQ4V348 819 aaPredicted RBP12.02□□□□□ -0.49
CTSA-210ENST00000606000 IRGCQ6NXR0 463 aa12.02□□□□□ -0.49
CTSA-210ENST00000606000 INO80CQ6PI98 192 aaPredicted RBP12.02□□□□□ -0.49
CTSA-210ENST00000606000 NAPRTQ6XQN6 538 aa12.02□□□□□ -0.49
CTSA-210ENST00000606000 CCDC81Q6ZN84 652 aa12.02□□□□□ -0.49
CTSA-210ENST00000606000 LINC00523Q86TU6 105 aa12.02□□□□□ -0.49
CTSA-210ENST00000606000 CFAP206Q8IYR0 622 aa12.02□□□□□ -0.49
CTSA-210ENST00000606000 PRELID2Q8N945 189 aa12.02□□□□□ -0.49
CTSA-210ENST00000606000 HM13Q8TCT9 377 aa12.02□□□□□ -0.49
CTSA-210ENST00000606000 MS4A14Q96JA4 679 aa12.02□□□□□ -0.49
CTSA-210ENST00000606000 ZNF514Q96K75 400 aaPredicted RBP12.02□□□□□ -0.49
CTSA-210ENST00000606000 LINC00615Q96LM1 132 aaPredicted RBP12.02□□□□□ -0.49
CTSA-210ENST00000606000 CCNL2Q96S94 520 aaPredicted RBP12.02□□□□□ -0.49
CTSA-210ENST00000606000 EPB41L1Q9H4G0 881 aa12.02□□□□□ -0.49
CTSA-210ENST00000606000 CASS4Q9NQ75 786 aa12.02□□□□□ -0.49
CTSA-210ENST00000606000 SIDT1Q9NXL6 827 aaKnown RBP12.02□□□□□ -0.49
CTSA-210ENST00000606000 PAK5Q9P286 719 aa12.02□□□□□ -0.49
CTSA-210ENST00000606000 PCDHGA3Q9Y5H0 932 aa12.02□□□□□ -0.49
CTSA-210ENST00000606000 DSPP15924 2871 aaKnown RBP12.02□□□□□ -0.49
CTSA-210ENST00000606000 NBEAQ8NFP9 2946 aa12.01□□□□□ -0.49
CTSA-210ENST00000606000 TEX51A0A1B0GUA7 166 aa12.01□□□□□ -0.49
CTSA-210ENST00000606000 ERI2A8K979 691 aaKnown RBP12.01□□□□□ -0.49
CTSA-210ENST00000606000 B4E171 279 aa12.01□□□□□ -0.49
CTSA-210ENST00000606000 RASSF9O75901 435 aa12.01□□□□□ -0.49
CTSA-210ENST00000606000 GOT2P00505 430 aaKnown RBP12.01□□□□□ -0.49
CTSA-210ENST00000606000 SLC35G4P0C7Q5 338 aa12.01□□□□□ -0.49
CTSA-210ENST00000606000 RALBP11234 206 aa12.01□□□□□ -0.49
CTSA-210ENST00000606000 PSMA3P25788 255 aa12.01□□□□□ -0.49
CTSA-210ENST00000606000 PDHA2P29803 388 aa12.01□□□□□ -0.49
CTSA-210ENST00000606000 TSPAN7P41732 249 aa12.01□□□□□ -0.49
CTSA-210ENST00000606000 ARCN1P48444 511 aaKnown RBP12.01□□□□□ -0.49
CTSA-210ENST00000606000 MC2RQ01718 297 aa12.01□□□□□ -0.49
CTSA-210ENST00000606000 CACNG1Q06432 222 aa12.01□□□□□ -0.49
CTSA-210ENST00000606000 PLCL1Q15111 1095 aa12.01□□□□□ -0.49
CTSA-210ENST00000606000 TRIP13Q15645 432 aaPredicted RBP12.01□□□□□ -0.49
CTSA-210ENST00000606000 GPR33Q49SQ1 333 aa12.01□□□□□ -0.49
CTSA-210ENST00000606000 TSTD2Q5T7W7 516 aa12.01□□□□□ -0.49
CTSA-210ENST00000606000 TMEM164Q5U3C3 297 aa12.01□□□□□ -0.49
CTSA-210ENST00000606000 TTC27Q6P3X3 843 aa12.01□□□□□ -0.49
CTSA-210ENST00000606000 DRICH1Q6PGQ1 229 aaPredicted RBP12.01□□□□□ -0.49
CTSA-210ENST00000606000 ZNF534Q76KX8 674 aa12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms