RNA–Protein interactions for RNA: ENST00000602898.1

SPTBN1-206, Transcript of spectrin beta, non-erythrocytic 1, humanhuman

TSL 1 (best)

Gene SPTBN1, Length 2,942 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN1-206ENST00000602898 FAM86B1E9PN63 330 aa4.96□□□□□ -1.61
SPTBN1-206ENST00000602898 ARNTLO00327 626 aa4.96□□□□□ -1.61
SPTBN1-206ENST00000602898 ZNF197O14709 1029 aa4.96□□□□□ -1.61
SPTBN1-206ENST00000602898 PHGDHO43175 533 aaKnown RBP4.96□□□□□ -1.61
SPTBN1-206ENST00000602898 MITFO75030 526 aaPredicted RBP4.96□□□□□ -1.61
SPTBN1-206ENST00000602898 CRTAPO75718 401 aaPredicted RBP4.96□□□□□ -1.61
SPTBN1-206ENST00000602898 RPLP1P05386 114 aaKnown RBP4.96□□□□□ -1.61
SPTBN1-206ENST00000602898 FAM86B2P0C5J1 330 aa4.96□□□□□ -1.61
SPTBN1-206ENST00000602898 SMIM18P0DKX4 95 aa4.96□□□□□ -1.61
SPTBN1-206ENST00000602898 PEPDP12955 493 aa4.96□□□□□ -1.61
SPTBN1-206ENST00000602898 PCSK6P29122 969 aa4.96□□□□□ -1.61
SPTBN1-206ENST00000602898 GPR4P46093 362 aa4.96□□□□□ -1.61
SPTBN1-206ENST00000602898 SMSP52788 366 aa4.96□□□□□ -1.61
SPTBN1-206ENST00000602898 CDH8P55286 799 aa4.96□□□□□ -1.61
SPTBN1-206ENST00000602898 PPARAQ07869 468 aa4.96□□□□□ -1.61
SPTBN1-206ENST00000602898 GPR176Q14439 515 aa4.96□□□□□ -1.61
SPTBN1-206ENST00000602898 BEX5Q5H9J7 111 aa4.96□□□□□ -1.61
SPTBN1-206ENST00000602898 RARS2Q5T160 578 aaKnown RBP4.96□□□□□ -1.61
SPTBN1-206ENST00000602898 C6orf163Q5TEZ5 329 aa4.96□□□□□ -1.61
SPTBN1-206ENST00000602898 RAP1GAP2Q684P5 730 aa4.96□□□□□ -1.61
SPTBN1-206ENST00000602898 WBP2NLQ6ICG8 309 aa4.96□□□□□ -1.61
SPTBN1-206ENST00000602898 KANSL1Q7Z3B3 1105 aa4.96□□□□□ -1.61
SPTBN1-206ENST00000602898 TMC3Q7Z5M5 1100 aa4.96□□□□□ -1.61
SPTBN1-206ENST00000602898 AACSQ86V21 672 aa4.96□□□□□ -1.61
SPTBN1-206ENST00000602898 FAM86B1Q8N7N1 296 aa4.96□□□□□ -1.61
SPTBN1-206ENST00000602898 TTLL6Q8N841 843 aa4.96□□□□□ -1.61
SPTBN1-206ENST00000602898 L3MBTL4Q8NA19 623 aa4.96□□□□□ -1.61
SPTBN1-206ENST00000602898 DTWD2Q8NBA8 298 aa4.96□□□□□ -1.61
SPTBN1-206ENST00000602898 OR2I1PQ8NGU4 316 aa4.96□□□□□ -1.61
SPTBN1-206ENST00000602898 DNAJA4Q8WW22 397 aaPredicted RBP4.96□□□□□ -1.61
SPTBN1-206ENST00000602898 C3orf49Q96BT1 292 aa4.96□□□□□ -1.61
SPTBN1-206ENST00000602898 FAM89AQ96GI7 184 aa4.96□□□□□ -1.61
SPTBN1-206ENST00000602898 PIWIL1Q96J94 861 aaKnown RBP4.96□□□□□ -1.61
SPTBN1-206ENST00000602898 PLEKHA8Q96JA3 519 aa4.96□□□□□ -1.61
SPTBN1-206ENST00000602898 C1QTNF3Q9BXJ4 246 aa4.96□□□□□ -1.61
SPTBN1-206ENST00000602898 POFUT1Q9H488 388 aa4.96□□□□□ -1.61
SPTBN1-206ENST00000602898 MORF4L1Q9UBU8 362 aa4.96□□□□□ -1.61
SPTBN1-206ENST00000602898 TMEFF2Q9UIK5 374 aaPredicted RBP4.96□□□□□ -1.61
SPTBN1-206ENST00000602898 ATXN7L1Q9ULK2 861 aaPredicted RBP4.96□□□□□ -1.61
SPTBN1-206ENST00000602898 MROH7-TTC4A0A0A0MT08 1334 aa4.96□□□□□ -1.62
SPTBN1-206ENST00000602898 TIAM2Q8IVF5 1701 aa4.96□□□□□ -1.62
SPTBN1-206ENST00000602898 A0A1B0GTQ1 180 aa4.96□□□□□ -1.62
SPTBN1-206ENST00000602898 C1QTNF9BB2RNN3 333 aa4.96□□□□□ -1.62
SPTBN1-206ENST00000602898 KPNA4O00629 521 aaPredicted RBP4.96□□□□□ -1.62
SPTBN1-206ENST00000602898 TNFRSF10CO14798 259 aa4.96□□□□□ -1.62
SPTBN1-206ENST00000602898 ZNF185O15231 689 aa4.96□□□□□ -1.62
SPTBN1-206ENST00000602898 RBBP9O75884 186 aa4.96□□□□□ -1.62
SPTBN1-206ENST00000602898 SNAPINO95295 136 aa4.96□□□□□ -1.62
SPTBN1-206ENST00000602898 OR2C1O95371 312 aa4.96□□□□□ -1.62
SPTBN1-206ENST00000602898 ABHD2P08910 425 aa4.96□□□□□ -1.62
SPTBN1-206ENST00000602898 KRT3P12035 628 aa4.96□□□□□ -1.62
SPTBN1-206ENST00000602898 SREBF1P36956 1147 aa4.96□□□□□ -1.62
SPTBN1-206ENST00000602898 CDKN1AP38936 164 aa4.96□□□□□ -1.62
SPTBN1-206ENST00000602898 CASP3P42574 277 aa4.96□□□□□ -1.62
SPTBN1-206ENST00000602898 ALDH1A3P47895 512 aa4.96□□□□□ -1.62
SPTBN1-206ENST00000602898 CRYBB1P53674 252 aaPredicted RBP4.96□□□□□ -1.62
SPTBN1-206ENST00000602898 CALCOCO2Q13137 446 aa4.96□□□□□ -1.62
SPTBN1-206ENST00000602898 SNTA1Q13424 505 aa4.96□□□□□ -1.62
SPTBN1-206ENST00000602898 SNTB1Q13884 538 aaKnown RBP4.96□□□□□ -1.62
SPTBN1-206ENST00000602898 POU6F1Q14863 301 aa4.96□□□□□ -1.62
SPTBN1-206ENST00000602898 DPY19L1Q2PZI1 675 aa4.96□□□□□ -1.62
SPTBN1-206ENST00000602898 AGAP7PQ5VUJ5 663 aa4.96□□□□□ -1.62
SPTBN1-206ENST00000602898 ZNF385CQ66K41 422 aaPredicted RBP4.96□□□□□ -1.62
SPTBN1-206ENST00000602898 FIGNL1Q6PIW4 674 aa4.96□□□□□ -1.62
SPTBN1-206ENST00000602898 CYP20A1Q6UW02 462 aa4.96□□□□□ -1.62
SPTBN1-206ENST00000602898 LINC00696Q6ZRV3 163 aa4.96□□□□□ -1.62
SPTBN1-206ENST00000602898 ERN2Q76MJ5 926 aaKnown RBP4.96□□□□□ -1.62
SPTBN1-206ENST00000602898 SV2AQ7L0J3 742 aa4.96□□□□□ -1.62
SPTBN1-206ENST00000602898 FJX1Q86VR8 437 aa4.96□□□□□ -1.62
SPTBN1-206ENST00000602898 ZNF573Q86YE8 665 aa4.96□□□□□ -1.62
SPTBN1-206ENST00000602898 KBTBD2Q8IY47 623 aa4.96□□□□□ -1.62
SPTBN1-206ENST00000602898 FAM185AQ8N0U4 392 aa4.96□□□□□ -1.62
SPTBN1-206ENST00000602898 CRYBG2Q8N1P7 616 aa4.96□□□□□ -1.62
SPTBN1-206ENST00000602898 BHLHE23Q8NDY6 225 aa4.96□□□□□ -1.62
SPTBN1-206ENST00000602898 OR13H1Q8NG92 308 aa4.96□□□□□ -1.62
SPTBN1-206ENST00000602898 ZFP28Q8NHY6 868 aa4.96□□□□□ -1.62
SPTBN1-206ENST00000602898 PPP4R1Q8TF05 950 aa4.96□□□□□ -1.62
SPTBN1-206ENST00000602898 SCFD1Q8WVM8 642 aa4.96□□□□□ -1.62
SPTBN1-206ENST00000602898 CAPSLQ8WWF8 208 aa4.96□□□□□ -1.62
SPTBN1-206ENST00000602898 TANKQ92844 425 aa4.96□□□□□ -1.62
SPTBN1-206ENST00000602898 DVL3Q92997 716 aaPredicted RBP4.96□□□□□ -1.62
SPTBN1-206ENST00000602898 TLCD1Q96CP7 247 aa4.96□□□□□ -1.62
SPTBN1-206ENST00000602898 OMA1Q96E52 524 aa4.96□□□□□ -1.62
SPTBN1-206ENST00000602898 SNX22Q96L94 193 aa4.96□□□□□ -1.62
SPTBN1-206ENST00000602898 QRFPRQ96P65 431 aa4.96□□□□□ -1.62
SPTBN1-206ENST00000602898 DGAT2Q96PD7 388 aa4.96□□□□□ -1.62
SPTBN1-206ENST00000602898 PANX1Q96RD7 426 aa4.96□□□□□ -1.62
SPTBN1-206ENST00000602898 FERMT1Q9BQL6 677 aa4.96□□□□□ -1.62
SPTBN1-206ENST00000602898 PELOQ9BRX2 385 aaKnown RBP4.96□□□□□ -1.62
SPTBN1-206ENST00000602898 LRRC1Q9BTT6 524 aa4.96□□□□□ -1.62
SPTBN1-206ENST00000602898 C1QTNF7Q9BXJ2 289 aa4.96□□□□□ -1.62
SPTBN1-206ENST00000602898 TLR10Q9BXR5 811 aa4.96□□□□□ -1.62
SPTBN1-206ENST00000602898 CELF4Q9BZC1 486 aaKnown RBP4.96□□□□□ -1.62
SPTBN1-206ENST00000602898 PRRG3Q9BZD7 231 aa4.96□□□□□ -1.62
SPTBN1-206ENST00000602898 EGLN1Q9GZT9 426 aa4.96□□□□□ -1.62
SPTBN1-206ENST00000602898 HOXD1Q9GZZ0 328 aa4.96□□□□□ -1.62
SPTBN1-206ENST00000602898 RIMS4Q9H426 269 aaPredicted RBP4.96□□□□□ -1.62
SPTBN1-206ENST00000602898 ZNF576Q9H609 170 aa4.96□□□□□ -1.62
SPTBN1-206ENST00000602898 ZMAT4Q9H898 229 aa4.96□□□□□ -1.62
SPTBN1-206ENST00000602898 DNAJC11Q9NVH1 559 aa4.96□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms