RNA–Protein interactions for RNA: ENST00000602574.5

COMMD3-215, Transcript of COMM domain containing 3, humanhuman

TSL 1 (best)

Gene COMMD3, Length 2,290 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3-215ENST00000602574 ANKDD1BA6NHY2 528 aa8.78□□□□□ -1
COMMD3-215ENST00000602574 A8MXE2 369 aa8.78□□□□□ -1
COMMD3-215ENST00000602574 H7C0S8 307 aa8.78□□□□□ -1
COMMD3-215ENST00000602574 DNASE2O00115 360 aaPredicted RBP8.78□□□□□ -1
COMMD3-215ENST00000602574 TOX3O15405 576 aaPredicted RBP8.78□□□□□ -1
COMMD3-215ENST00000602574 GPAA1O43292 621 aa8.78□□□□□ -1
COMMD3-215ENST00000602574 HCRTR2O43614 444 aa8.78□□□□□ -1
COMMD3-215ENST00000602574 POP7O75817 140 aaKnown RBP8.78□□□□□ -1
COMMD3-215ENST00000602574 CABYRO75952 493 aa8.78□□□□□ -1
COMMD3-215ENST00000602574 TMEM63AO94886 807 aa8.78□□□□□ -1
COMMD3-215ENST00000602574 COX4I1P13073 169 aa8.78□□□□□ -1
COMMD3-215ENST00000602574 PROZP22891 400 aa8.78□□□□□ -1
COMMD3-215ENST00000602574 ADRA1DP25100 572 aa8.78□□□□□ -1
COMMD3-215ENST00000602574 CAPGP40121 348 aa8.78□□□□□ -1
COMMD3-215ENST00000602574 DPP6P42658 865 aa8.78□□□□□ -1
COMMD3-215ENST00000602574 CASP6P55212 293 aa8.78□□□□□ -1
COMMD3-215ENST00000602574 ACTR1AP61163 376 aa8.78□□□□□ -1
COMMD3-215ENST00000602574 ALKBH1Q13686 389 aaKnown RBP8.78□□□□□ -1
COMMD3-215ENST00000602574 FGL2Q14314 439 aa8.78□□□□□ -1
COMMD3-215ENST00000602574 SMCO1Q147U7 214 aa8.78□□□□□ -1
COMMD3-215ENST00000602574 COL28A1Q2UY09 1125 aa8.78□□□□□ -1
COMMD3-215ENST00000602574 ZIK1Q3SY52 487 aaPredicted RBP8.78□□□□□ -1
COMMD3-215ENST00000602574 PAN2Q504Q3 1202 aaKnown RBP8.78□□□□□ -1
COMMD3-215ENST00000602574 PRR16Q569H4 304 aa8.78□□□□□ -1
COMMD3-215ENST00000602574 PAN3Q58A45 887 aaKnown RBP8.78□□□□□ -1
COMMD3-215ENST00000602574 KDM4DQ6B0I6 523 aa8.78□□□□□ -1
COMMD3-215ENST00000602574 XAF1Q6GPH4 301 aa8.78□□□□□ -1
COMMD3-215ENST00000602574 C16orf46Q6P387 395 aa8.78□□□□□ -1
COMMD3-215ENST00000602574 C16orf89Q6UX73 402 aa8.78□□□□□ -1
COMMD3-215ENST00000602574 FAM122BQ7Z309 247 aa8.78□□□□□ -1
COMMD3-215ENST00000602574 PIWIL3Q7Z3Z3 882 aaKnown RBP8.78□□□□□ -1
COMMD3-215ENST00000602574 RABEPKQ7Z6M1 372 aa8.78□□□□□ -1
COMMD3-215ENST00000602574 ZBTB46Q86UZ6 589 aa8.78□□□□□ -1
COMMD3-215ENST00000602574 DEFB107AQ8IZN7 70 aa8.78□□□□□ -1
COMMD3-215ENST00000602574 PRELID2Q8N945 189 aa8.78□□□□□ -1
COMMD3-215ENST00000602574 CAMKVQ8NCB2 501 aa8.78□□□□□ -1
COMMD3-215ENST00000602574 MCPH1Q8NEM0 835 aa8.78□□□□□ -1
COMMD3-215ENST00000602574 OR56B2PQ8NGI1 322 aa8.78□□□□□ -1
COMMD3-215ENST00000602574 SHKBP1Q8TBC3 707 aa8.78□□□□□ -1
COMMD3-215ENST00000602574 CCDC124Q96CT7 223 aaKnown RBP8.78□□□□□ -1
COMMD3-215ENST00000602574 HDHD5Q9BXW7 423 aa8.78□□□□□ -1
COMMD3-215ENST00000602574 RNPEPQ9H4A4 650 aa8.78□□□□□ -1
COMMD3-215ENST00000602574 OPA3Q9H6K4 179 aa8.78□□□□□ -1
COMMD3-215ENST00000602574 MYOZ1Q9NP98 299 aaPredicted RBP8.78□□□□□ -1
COMMD3-215ENST00000602574 GKN1Q9NS71 199 aa8.78□□□□□ -1
COMMD3-215ENST00000602574 COX16Q9P0S2 106 aa8.78□□□□□ -1
COMMD3-215ENST00000602574 MGAT4BQ9UQ53 548 aa8.78□□□□□ -1
COMMD3-215ENST00000602574 DLEC1Q9Y238 1755 aa8.78□□□□□ -1
COMMD3-215ENST00000602574 ARAP2Q8WZ64 1704 aa8.77□□□□□ -1
COMMD3-215ENST00000602574 CCDC88AQ3V6T2 1871 aa8.77□□□□□ -1.01
COMMD3-215ENST00000602574 RGPD2P0DJD1 1756 aa8.77□□□□□ -1.01
COMMD3-215ENST00000602574 A0A087X0T9 212 aa8.77□□□□□ -1.01
COMMD3-215ENST00000602574 AGAP5A6NIR3 686 aa8.77□□□□□ -1.01
COMMD3-215ENST00000602574 KBTBD13C9JR72 458 aa8.77□□□□□ -1.01
COMMD3-215ENST00000602574 M0R3G1 203 aa8.77□□□□□ -1.01
COMMD3-215ENST00000602574 PHYHO14832 338 aa8.77□□□□□ -1.01
COMMD3-215ENST00000602574 EPHB6O15197 1021 aa8.77□□□□□ -1.01
COMMD3-215ENST00000602574 TP73O15350 636 aa8.77□□□□□ -1.01
COMMD3-215ENST00000602574 NSA2O95478 260 aaKnown RBP8.77□□□□□ -1.01
COMMD3-215ENST00000602574 PEX11BO96011 259 aa8.77□□□□□ -1.01
COMMD3-215ENST00000602574 PROCP04070 461 aa8.77□□□□□ -1.01
COMMD3-215ENST00000602574 ALPPP05187 535 aa8.77□□□□□ -1.01
COMMD3-215ENST00000602574 CD36P16671 472 aa8.77□□□□□ -1.01
COMMD3-215ENST00000602574 OGNP20774 298 aaKnown RBP8.77□□□□□ -1.01
COMMD3-215ENST00000602574 TGM2P21980 687 aa8.77□□□□□ -1.01
COMMD3-215ENST00000602574 EEF1B2P24534 225 aaKnown RBP8.77□□□□□ -1.01
COMMD3-215ENST00000602574 ITGB8P26012 769 aa8.77□□□□□ -1.01
COMMD3-215ENST00000602574 CRABP1P29762 137 aa8.77□□□□□ -1.01
COMMD3-215ENST00000602574 MAT2AP31153 395 aaKnown RBP8.77□□□□□ -1.01
COMMD3-215ENST00000602574 COILP38432 576 aaPredicted RBP8.77□□□□□ -1.01
COMMD3-215ENST00000602574 PLA2G16P53816 162 aa8.77□□□□□ -1.01
COMMD3-215ENST00000602574 RAB25P57735 213 aa8.77□□□□□ -1.01
COMMD3-215ENST00000602574 GABARAPL2P60520 117 aa8.77□□□□□ -1.01
COMMD3-215ENST00000602574 MRPS22P82650 360 aaKnown RBP8.77□□□□□ -1.01
COMMD3-215ENST00000602574 NEDD8Q15843 81 aa8.77□□□□□ -1.01
COMMD3-215ENST00000602574 C2CD6Q53TS8 623 aa8.77□□□□□ -1.01
COMMD3-215ENST00000602574 USP17L1Q7RTZ2 530 aa8.77□□□□□ -1.01
COMMD3-215ENST00000602574 CBARPQ8N350 705 aaPredicted RBP8.77□□□□□ -1.01
COMMD3-215ENST00000602574 DMBX1Q8NFW5 382 aa8.77□□□□□ -1.01
COMMD3-215ENST00000602574 OR7A2PQ8NGA2 310 aa8.77□□□□□ -1.01
COMMD3-215ENST00000602574 OR6X1Q8NH79 312 aa8.77□□□□□ -1.01
COMMD3-215ENST00000602574 AKR7LQ8NHP1 331 aa8.77□□□□□ -1.01
COMMD3-215ENST00000602574 SLC5A11Q8WWX8 675 aa8.77□□□□□ -1.01
COMMD3-215ENST00000602574 USP7Q93009 1102 aa8.77□□□□□ -1.01
COMMD3-215ENST00000602574 P2RX5Q93086 422 aa8.77□□□□□ -1.01
COMMD3-215ENST00000602574 MUL1Q969V5 352 aa8.77□□□□□ -1.01
COMMD3-215ENST00000602574 ZNF669Q96BR6 464 aaPredicted RBP8.77□□□□□ -1.01
COMMD3-215ENST00000602574 PTERQ96BW5 349 aa8.77□□□□□ -1.01
COMMD3-215ENST00000602574 MTFMTQ96DP5 389 aaKnown RBP8.77□□□□□ -1.01
COMMD3-215ENST00000602574 HYLS1Q96M11 299 aa8.77□□□□□ -1.01
COMMD3-215ENST00000602574 TBCDQ9BTW9 1192 aa8.77□□□□□ -1.01
COMMD3-215ENST00000602574 PDCD10Q9BUL8 212 aa8.77□□□□□ -1.01
COMMD3-215ENST00000602574 FUNDC2Q9BWH2 189 aa8.77□□□□□ -1.01
COMMD3-215ENST00000602574 SEBOXQ9HB31 216 aaPredicted RBP8.77□□□□□ -1.01
COMMD3-215ENST00000602574 RANGRFQ9HD47 186 aaPredicted RBP8.77□□□□□ -1.01
COMMD3-215ENST00000602574 RGS17Q9UGC6 210 aaPredicted RBP8.77□□□□□ -1.01
COMMD3-215ENST00000602574 MLXQ9UH92 298 aa8.77□□□□□ -1.01
COMMD3-215ENST00000602574 CHORDC1Q9UHD1 332 aaPredicted RBP8.77□□□□□ -1.01
COMMD3-215ENST00000602574 PKD1L3Q7Z443 1732 aa8.77□□□□□ -1.01
COMMD3-215ENST00000602574 DOCK2Q92608 1830 aa8.77□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms