RNA–Protein interactions for RNA: ENST00000601897.1

RAB11B-205, Transcript of RAB11B, member RAS oncogene family, humanhuman

TSL 3 BASIC

Gene RAB11B, Length 577 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB11B-205ENST00000601897 KCTD3Q9Y597 815 aa12.72□□□□□ -0.37
RAB11B-205ENST00000601897 PCDHGA4Q9Y5G9 962 aa12.72□□□□□ -0.37
RAB11B-205ENST00000601897 HEBP2Q9Y5Z4 205 aa12.72□□□□□ -0.37
RAB11B-205ENST00000601897 COLEC10Q9Y6Z7 277 aa12.72□□□□□ -0.37
RAB11B-205ENST00000601897 ATRXP46100 2492 aa12.72□□□□□ -0.37
RAB11B-205ENST00000601897 MN1Q10571 1320 aaPredicted RBP12.71□□□□□ -0.37
RAB11B-205ENST00000601897 MGAT4DA6NG13 374 aa12.71□□□□□ -0.37
RAB11B-205ENST00000601897 IQCJ-SCHIP1C9J366 451 aaPredicted RBP12.71□□□□□ -0.37
RAB11B-205ENST00000601897 IFRD1O00458 451 aaPredicted RBP12.71□□□□□ -0.37
RAB11B-205ENST00000601897 MAP3K7O43318 606 aa12.71□□□□□ -0.37
RAB11B-205ENST00000601897 TPH1P17752 444 aa12.71□□□□□ -0.37
RAB11B-205ENST00000601897 MC4RP32245 332 aa12.71□□□□□ -0.37
RAB11B-205ENST00000601897 ADRA1AP35348 466 aa12.71□□□□□ -0.37
RAB11B-205ENST00000601897 CAPZBP47756 277 aa12.71□□□□□ -0.37
RAB11B-205ENST00000601897 DMPKQ09013 629 aa12.71□□□□□ -0.37
RAB11B-205ENST00000601897 PRKAA1Q13131 559 aa12.71□□□□□ -0.37
RAB11B-205ENST00000601897 POU6F1Q14863 301 aa12.71□□□□□ -0.37
RAB11B-205ENST00000601897 OOSP2Q86WS3 158 aa12.71□□□□□ -0.37
RAB11B-205ENST00000601897 DTX1Q86Y01 620 aa12.71□□□□□ -0.37
RAB11B-205ENST00000601897 CCDC89Q8N998 374 aa12.71□□□□□ -0.37
RAB11B-205ENST00000601897 SIDT2Q8NBJ9 832 aaKnown RBP12.71□□□□□ -0.37
RAB11B-205ENST00000601897 RSC1A1Q92681 617 aa12.71□□□□□ -0.37
RAB11B-205ENST00000601897 EXTL1Q92935 676 aa12.71□□□□□ -0.37
RAB11B-205ENST00000601897 PMEPA1Q969W9 287 aa12.71□□□□□ -0.37
RAB11B-205ENST00000601897 RTP4Q96DX8 246 aa12.71□□□□□ -0.37
RAB11B-205ENST00000601897 STAMBPL1Q96FJ0 436 aa12.71□□□□□ -0.37
RAB11B-205ENST00000601897 MED8Q96G25 268 aa12.71□□□□□ -0.37
RAB11B-205ENST00000601897 OR6C1Q96RD1 312 aa12.71□□□□□ -0.37
RAB11B-205ENST00000601897 TTC1Q99614 292 aa12.71□□□□□ -0.37
RAB11B-205ENST00000601897 FAM117AQ9C073 453 aa12.71□□□□□ -0.37
RAB11B-205ENST00000601897 WWP1Q9H0M0 922 aa12.71□□□□□ -0.37
RAB11B-205ENST00000601897 WDR37Q9Y2I8 494 aa12.71□□□□□ -0.37
RAB11B-205ENST00000601897 CFAP20Q9Y6A4 193 aaKnown RBP12.71□□□□□ -0.37
RAB11B-205ENST00000601897 ITPR1Q14643 2758 aa12.7□□□□□ -0.38
RAB11B-205ENST00000601897 ZNF891A8MT65 544 aaPredicted RBP12.7□□□□□ -0.38
RAB11B-205ENST00000601897 F8W8V4 182 aa12.7□□□□□ -0.38
RAB11B-205ENST00000601897 TOX3O15405 576 aaPredicted RBP12.7□□□□□ -0.38
RAB11B-205ENST00000601897 DDX3YO15523 660 aaKnown RBP12.7□□□□□ -0.38
RAB11B-205ENST00000601897 STK17BO94768 372 aa12.7□□□□□ -0.38
RAB11B-205ENST00000601897 ITGB2P05107 769 aa12.7□□□□□ -0.38
RAB11B-205ENST00000601897 ANKRD34CP0C6C1 535 aa12.7□□□□□ -0.38
RAB11B-205ENST00000601897 CCNYL3P0C7X3 344 aa12.7□□□□□ -0.38
RAB11B-205ENST00000601897 MTHFD1P11586 935 aaKnown RBP12.7□□□□□ -0.38
RAB11B-205ENST00000601897 SFTPCP11686 197 aa12.7□□□□□ -0.38
RAB11B-205ENST00000601897 ATP1B2P14415 290 aaPredicted RBP12.7□□□□□ -0.38
RAB11B-205ENST00000601897 BRAFP15056 766 aa12.7□□□□□ -0.38
RAB11B-205ENST00000601897 NDUFS1P28331 727 aa12.7□□□□□ -0.38
RAB11B-205ENST00000601897 STIP1P31948 543 aaKnown RBP12.7□□□□□ -0.38
RAB11B-205ENST00000601897 LEPRP48357 1165 aaKnown RBP12.7□□□□□ -0.38
RAB11B-205ENST00000601897 LAMB3Q13751 1172 aa12.7□□□□□ -0.38
RAB11B-205ENST00000601897 RPS6KA1Q15418 735 aa12.7□□□□□ -0.38
RAB11B-205ENST00000601897 SKIDA1Q1XH10 827 aa12.7□□□□□ -0.38
RAB11B-205ENST00000601897 GPR33Q49SQ1 333 aa12.7□□□□□ -0.38
RAB11B-205ENST00000601897 DNTTIP2Q5QJE6 756 aaKnown RBP12.7□□□□□ -0.38
RAB11B-205ENST00000601897 C11orf96Q7Z7L8 435 aa12.7□□□□□ -0.38
RAB11B-205ENST00000601897 HOOK3Q86VS8 718 aa12.7□□□□□ -0.38
RAB11B-205ENST00000601897 TMEM139Q8IV31 216 aa12.7□□□□□ -0.38
RAB11B-205ENST00000601897 NXPE1Q8N323 547 aa12.7□□□□□ -0.38
RAB11B-205ENST00000601897 ESX1Q8N693 406 aa12.7□□□□□ -0.38
RAB11B-205ENST00000601897 OR2L2Q8NH16 312 aa12.7□□□□□ -0.38
RAB11B-205ENST00000601897 TTC9Q92623 222 aa12.7□□□□□ -0.38
RAB11B-205ENST00000601897 DNAJC1Q96KC8 554 aaKnown RBP12.7□□□□□ -0.38
RAB11B-205ENST00000601897 CCM2Q9BSQ5 444 aa12.7□□□□□ -0.38
RAB11B-205ENST00000601897 FRMD8P1Q9BZ68 369 aaPredicted RBP12.7□□□□□ -0.38
RAB11B-205ENST00000601897 APMAPQ9HDC9 416 aa12.7□□□□□ -0.38
RAB11B-205ENST00000601897 PDE7BQ9NP56 450 aa12.7□□□□□ -0.38
RAB11B-205ENST00000601897 PIH1D1Q9NWS0 290 aaKnown RBP12.7□□□□□ -0.38
RAB11B-205ENST00000601897 LNPEPQ9UIQ6 1025 aa12.7□□□□□ -0.38
RAB11B-205ENST00000601897 SSUH2Q9Y2M2 353 aa12.7□□□□□ -0.38
RAB11B-205ENST00000601897 PCDHB3Q9Y5E6 796 aa12.7□□□□□ -0.38
RAB11B-205ENST00000601897 CAPN6Q9Y6Q1 641 aa12.7□□□□□ -0.38
RAB11B-205ENST00000601897 SDK2Q58EX2 2172 aa12.69□□□□□ -0.38
RAB11B-205ENST00000601897 CCDC78A2IDD5 438 aa12.69□□□□□ -0.38
RAB11B-205ENST00000601897 CCL22O00626 93 aa12.69□□□□□ -0.38
RAB11B-205ENST00000601897 ARHGAP6O43182 974 aa12.69□□□□□ -0.38
RAB11B-205ENST00000601897 AP2A1O95782 977 aa12.69□□□□□ -0.38
RAB11B-205ENST00000601897 C9P02748 559 aa12.69□□□□□ -0.38
RAB11B-205ENST00000601897 LIFP15018 202 aa12.69□□□□□ -0.38
RAB11B-205ENST00000601897 FDFT1P37268 417 aa12.69□□□□□ -0.38
RAB11B-205ENST00000601897 ZNF140P52738 457 aaPredicted RBP12.69□□□□□ -0.38
RAB11B-205ENST00000601897 CYP4F2P78329 520 aa12.69□□□□□ -0.38
RAB11B-205ENST00000601897 MC1RQ01726 317 aa12.69□□□□□ -0.38
RAB11B-205ENST00000601897 CACNG1Q06432 222 aa12.69□□□□□ -0.38
RAB11B-205ENST00000601897 SNX1Q13596 522 aa12.69□□□□□ -0.38
RAB11B-205ENST00000601897 BCL7AQ4VC05 210 aa12.69□□□□□ -0.38
RAB11B-205ENST00000601897 TMTC4Q5T4D3 741 aa12.69□□□□□ -0.38
RAB11B-205ENST00000601897 METRNLQ641Q3 311 aa12.69□□□□□ -0.38
RAB11B-205ENST00000601897 XKR5Q6UX68 686 aa12.69□□□□□ -0.38
RAB11B-205ENST00000601897 FAM83HQ6ZRV2 1179 aaPredicted RBP12.69□□□□□ -0.38
RAB11B-205ENST00000601897 GSTA5Q7RTV2 222 aa12.69□□□□□ -0.38
RAB11B-205ENST00000601897 PPP1R3BQ86XI6 285 aa12.69□□□□□ -0.38
RAB11B-205ENST00000601897 ZNF843Q8N446 348 aa12.69□□□□□ -0.38
RAB11B-205ENST00000601897 HM13Q8TCT9 377 aa12.69□□□□□ -0.38
RAB11B-205ENST00000601897 STYXQ8WUJ0 223 aa12.69□□□□□ -0.38
RAB11B-205ENST00000601897 ATG4AQ8WYN0 398 aa12.69□□□□□ -0.38
RAB11B-205ENST00000601897 UBXN4Q92575 508 aa12.69□□□□□ -0.38
RAB11B-205ENST00000601897 HES6Q96HZ4 224 aa12.69□□□□□ -0.38
RAB11B-205ENST00000601897 FERD3LQ96RJ6 166 aa12.69□□□□□ -0.38
RAB11B-205ENST00000601897 GORASP1Q9BQQ3 440 aa12.69□□□□□ -0.38
RAB11B-205ENST00000601897 ZNF768Q9H5H4 540 aaKnown RBP12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms