RNA–Protein interactions for RNA: ENST00000601291.5

IRF3-228, Transcript of interferon regulatory factor 3, humanhuman

TSL 1 (best) BASIC

Gene IRF3, Length 1,556 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-228ENST00000601291 PTERQ96BW5 349 aa22.2■■□□□ 1.14
IRF3-228ENST00000601291 BIRC7Q96CA5 298 aa22.2■■□□□ 1.14
IRF3-228ENST00000601291 SIRPGQ9P1W8 387 aa22.2■■□□□ 1.14
IRF3-228ENST00000601291 RNF112Q9ULX5 631 aa22.2■■□□□ 1.14
IRF3-228ENST00000601291 HS3ST3A1Q9Y663 406 aa22.2■■□□□ 1.14
IRF3-228ENST00000601291 NPEPPSL1A6NEC2 478 aa22.19■■□□□ 1.14
IRF3-228ENST00000601291 SYCE1LA8MT33 242 aa22.19■■□□□ 1.14
IRF3-228ENST00000601291 TARM1B6A8C7 271 aa22.19■■□□□ 1.14
IRF3-228ENST00000601291 TOR1BO14657 336 aa22.19■■□□□ 1.14
IRF3-228ENST00000601291 PI15O43692 258 aa22.19■■□□□ 1.14
IRF3-228ENST00000601291 KERAO60938 352 aa22.19■■□□□ 1.14
IRF3-228ENST00000601291 LILRB5O75023 590 aa22.19■■□□□ 1.14
IRF3-228ENST00000601291 SBK3P0C264 359 aa22.19■■□□□ 1.14
IRF3-228ENST00000601291 KCNA4P22459 653 aa22.19■■□□□ 1.14
IRF3-228ENST00000601291 KELP23276 732 aa22.19■■□□□ 1.14
IRF3-228ENST00000601291 PBLDP30039 288 aaPredicted RBP22.19■■□□□ 1.14
IRF3-228ENST00000601291 ALDH3A1P30838 453 aa22.19■■□□□ 1.14
IRF3-228ENST00000601291 CLDN2P57739 230 aa22.19■■□□□ 1.14
IRF3-228ENST00000601291 GBX1Q14549 363 aa22.19■■□□□ 1.14
IRF3-228ENST00000601291 USP39Q53GS9 565 aaKnown RBP22.19■■□□□ 1.14
IRF3-228ENST00000601291 PIWIL4Q7Z3Z4 852 aaKnown RBP22.19■■□□□ 1.14
IRF3-228ENST00000601291 ADAMTSL2Q86TH1 951 aa22.19■■□□□ 1.14
IRF3-228ENST00000601291 FRMD1Q8N878 549 aa22.19■■□□□ 1.14
IRF3-228ENST00000601291 PPP1R14CQ8TAE6 165 aa22.19■■□□□ 1.14
IRF3-228ENST00000601291 TMEM159Q96B96 161 aa22.19■■□□□ 1.14
IRF3-228ENST00000601291 MANSC1Q9H8J5 431 aa22.19■■□□□ 1.14
IRF3-228ENST00000601291 RMI1Q9H9A7 625 aa22.19■■□□□ 1.14
IRF3-228ENST00000601291 TSR3Q9UJK0 312 aaKnown RBP22.19■■□□□ 1.14
IRF3-228ENST00000601291 ZBTB32Q9Y2Y4 487 aaPredicted RBP22.19■■□□□ 1.14
IRF3-228ENST00000601291 NUMA1Q14980 2115 aa22.19■■□□□ 1.14
IRF3-228ENST00000601291 C17orf113A0A1B0GUU1 675 aa22.18■■□□□ 1.14
IRF3-228ENST00000601291 POM121BA6NF01 834 aa22.18■■□□□ 1.14
IRF3-228ENST00000601291 LIN7AO14910 233 aaPredicted RBP22.18■■□□□ 1.14
IRF3-228ENST00000601291 ASPHQ12797 758 aa22.18■■□□□ 1.14
IRF3-228ENST00000601291 OR4D1Q15615 310 aa22.18■■□□□ 1.14
IRF3-228ENST00000601291 TSNQ15631 228 aaKnown RBP22.18■■□□□ 1.14
IRF3-228ENST00000601291 RGS9BPQ6ZS82 235 aa22.18■■□□□ 1.14
IRF3-228ENST00000601291 C10orf107Q8IVU9 208 aa22.18■■□□□ 1.14
IRF3-228ENST00000601291 SNX19Q92543 992 aa22.18■■□□□ 1.14
IRF3-228ENST00000601291 ZNF75CPQ92670 426 aaPredicted RBP22.18■■□□□ 1.14
IRF3-228ENST00000601291 GLMNQ92990 594 aa22.18■■□□□ 1.14
IRF3-228ENST00000601291 CCDC126Q96EE4 140 aa22.18■■□□□ 1.14
IRF3-228ENST00000601291 PSD3Q9NYI0 1048 aa22.18■■□□□ 1.14
IRF3-228ENST00000601291 FAM8A1Q9UBU6 413 aa22.18■■□□□ 1.14
IRF3-228ENST00000601291 SLC17A4Q9Y2C5 497 aa22.18■■□□□ 1.14
IRF3-228ENST00000601291 DNMT3AQ9Y6K1 912 aaPredicted RBP22.18■■□□□ 1.14
IRF3-228ENST00000601291 SRRM3A6NNA2 597 aaPredicted RBP22.17■■□□□ 1.14
IRF3-228ENST00000601291 CDC7O00311 574 aa22.17■■□□□ 1.14
IRF3-228ENST00000601291 GRID2O43424 1007 aa22.17■■□□□ 1.14
IRF3-228ENST00000601291 SMIM24O75264 130 aa22.17■■□□□ 1.14
IRF3-228ENST00000601291 GPC4O75487 556 aa22.17■■□□□ 1.14
IRF3-228ENST00000601291 POP7O75817 140 aaKnown RBP22.17■■□□□ 1.14
IRF3-228ENST00000601291 MPC1LP0DKB6 136 aa22.17■■□□□ 1.14
IRF3-228ENST00000601291 BGNP21810 368 aa22.17■■□□□ 1.14
IRF3-228ENST00000601291 ATP5F1P24539 256 aaPredicted RBP22.17■■□□□ 1.14
IRF3-228ENST00000601291 HTR1BP28222 390 aa22.17■■□□□ 1.14
IRF3-228ENST00000601291 PRKAA2P54646 552 aa22.17■■□□□ 1.14
IRF3-228ENST00000601291 YPEL5P62699 121 aa22.17■■□□□ 1.14
IRF3-228ENST00000601291 CHI3L2Q15782 390 aa22.17■■□□□ 1.14
IRF3-228ENST00000601291 ATG16L1Q676U5 607 aa22.17■■□□□ 1.14
IRF3-228ENST00000601291 SLC36A4Q6YBV0 504 aa22.17■■□□□ 1.14
IRF3-228ENST00000601291 GCNT7Q6ZNI0 430 aa22.17■■□□□ 1.14
IRF3-228ENST00000601291 NEK10Q6ZWH5 1172 aa22.17■■□□□ 1.14
IRF3-228ENST00000601291 ZNF547Q8IVP9 402 aa22.17■■□□□ 1.14
IRF3-228ENST00000601291 TMEM145Q8NBT3 493 aa22.17■■□□□ 1.14
IRF3-228ENST00000601291 CADM4Q8NFZ8 388 aa22.17■■□□□ 1.14
IRF3-228ENST00000601291 HM13Q8TCT9 377 aa22.17■■□□□ 1.14
IRF3-228ENST00000601291 SKA2Q8WVK7 121 aaPredicted RBP22.17■■□□□ 1.14
IRF3-228ENST00000601291 CHMP6Q96FZ7 201 aa22.17■■□□□ 1.14
IRF3-228ENST00000601291 EBF2Q9HAK2 575 aa22.17■■□□□ 1.14
IRF3-228ENST00000601291 OXSMQ9NWU1 459 aa22.17■■□□□ 1.14
IRF3-228ENST00000601291 A0A1W2PPC4 97 aa22.16■■□□□ 1.14
IRF3-228ENST00000601291 KLHL33A6NCF5 533 aa22.16■■□□□ 1.14
IRF3-228ENST00000601291 TMEM221A6NGB7 291 aa22.16■■□□□ 1.14
IRF3-228ENST00000601291 TCP11X1B4DZS4 312 aa22.16■■□□□ 1.14
IRF3-228ENST00000601291 M0R296 226 aa22.16■■□□□ 1.14
IRF3-228ENST00000601291 KMOO15229 486 aa22.16■■□□□ 1.14
IRF3-228ENST00000601291 H2AFYO75367 372 aaKnown RBP22.16■■□□□ 1.14
IRF3-228ENST00000601291 TPBGLP0DKB5 382 aa22.16■■□□□ 1.14
IRF3-228ENST00000601291 HOXA6P31267 233 aa22.16■■□□□ 1.14
IRF3-228ENST00000601291 PFN3P60673 137 aa22.16■■□□□ 1.14
IRF3-228ENST00000601291 PLOD1Q02809 727 aaPredicted RBP22.16■■□□□ 1.14
IRF3-228ENST00000601291 NFATC4Q14934 902 aa22.16■■□□□ 1.14
IRF3-228ENST00000601291 FRA10AC1Q70Z53 315 aa22.16■■□□□ 1.14
IRF3-228ENST00000601291 SLC22A9Q8IVM8 553 aa22.16■■□□□ 1.14
IRF3-228ENST00000601291 OR2L2Q8NH16 312 aa22.16■■□□□ 1.14
IRF3-228ENST00000601291 EXT2Q93063 718 aa22.16■■□□□ 1.14
IRF3-228ENST00000601291 BMFQ96LC9 184 aa22.16■■□□□ 1.14
IRF3-228ENST00000601291 ATOH8Q96SQ7 321 aa22.16■■□□□ 1.14
IRF3-228ENST00000601291 IKZF3Q9UKT9 509 aa22.16■■□□□ 1.14
IRF3-228ENST00000601291 CA5BQ9Y2D0 317 aa22.16■■□□□ 1.14
IRF3-228ENST00000601291 SLC5A10A0PJK1 596 aa22.16■■□□□ 1.14
IRF3-228ENST00000601291 GMNCA6NCL1 334 aa22.16■■□□□ 1.14
IRF3-228ENST00000601291 MGAT4DA6NG13 374 aa22.16■■□□□ 1.14
IRF3-228ENST00000601291 TMEM202A6NGA9 273 aa22.16■■□□□ 1.14
IRF3-228ENST00000601291 H0Y8X5 98 aa22.16■■□□□ 1.14
IRF3-228ENST00000601291 KLF11O14901 512 aa22.16■■□□□ 1.14
IRF3-228ENST00000601291 TRIM13O60858 407 aa22.16■■□□□ 1.14
IRF3-228ENST00000601291 SLCO2B1O94956 709 aa22.16■■□□□ 1.14
IRF3-228ENST00000601291 VIMP08670 466 aaKnown RBP22.16■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms