RNA–Protein interactions for RNA: ENST00000601194.1

PSMC4-205, Transcript of proteasome 26S subunit, ATPase 4, human

TSL 3

Gene PSMC4, Length 650 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PSMC4-205	ENST00000601194	LAMA5	O15230	3695 aa		14	□□□□□ -0.17
PSMC4-205	ENST00000601194	CCDC187	A0A096LP49	1063 aa		13.99	□□□□□ -0.17
PSMC4-205	ENST00000601194	PRAMEF33	A0A0G2JMD5	474 aa		13.99	□□□□□ -0.17
PSMC4-205	ENST00000601194	C17orf113	A0A1B0GUU1	675 aa		13.99	□□□□□ -0.17
PSMC4-205	ENST00000601194	PMS2P1	A4D2B8	440 aa		13.99	□□□□□ -0.17
PSMC4-205	ENST00000601194	TMX2-CTNND1	H3BSU7	103 aa		13.99	□□□□□ -0.17
PSMC4-205	ENST00000601194	GOLGA8M	H3BSY2	632 aa		13.99	□□□□□ -0.17
PSMC4-205	ENST00000601194	TAF4	O00268	1085 aa		13.99	□□□□□ -0.17
PSMC4-205	ENST00000601194	BRINP1	O60477	761 aa		13.99	□□□□□ -0.17
PSMC4-205	ENST00000601194	DXO	O77932	396 aa	Known RBP	13.99	□□□□□ -0.17
PSMC4-205	ENST00000601194	VIP	P01282	170 aa		13.99	□□□□□ -0.17
PSMC4-205	ENST00000601194	HOXB3	P14651	431 aa	Predicted RBP	13.99	□□□□□ -0.17
PSMC4-205	ENST00000601194	IVD	P26440	423 aa		13.99	□□□□□ -0.17
PSMC4-205	ENST00000601194	PAFAH1B1	P43034	410 aa		13.99	□□□□□ -0.17
PSMC4-205	ENST00000601194	LSS	P48449	732 aa		13.99	□□□□□ -0.17
PSMC4-205	ENST00000601194	SEMA3A	Q14563	771 aa		13.99	□□□□□ -0.17
PSMC4-205	ENST00000601194	RPE65	Q16518	533 aa		13.99	□□□□□ -0.17
PSMC4-205	ENST00000601194	FASTKD1	Q53R41	847 aa	Known RBP	13.99	□□□□□ -0.17
PSMC4-205	ENST00000601194	C3orf38	Q5JPI3	329 aa		13.99	□□□□□ -0.17
PSMC4-205	ENST00000601194	TMEM26	Q6ZUK4	368 aa		13.99	□□□□□ -0.17
PSMC4-205	ENST00000601194	KLHL7	Q8IXQ5	586 aa		13.99	□□□□□ -0.17
PSMC4-205	ENST00000601194	PPIL6	Q8IXY8	311 aa		13.99	□□□□□ -0.17
PSMC4-205	ENST00000601194	LILRA3	Q8N6C8	439 aa	Predicted RBP	13.99	□□□□□ -0.17
PSMC4-205	ENST00000601194	OR4D9	Q8NGE8	314 aa		13.99	□□□□□ -0.17
PSMC4-205	ENST00000601194	OR10G6	Q8NH81	332 aa		13.99	□□□□□ -0.17
PSMC4-205	ENST00000601194	CXorf40B	Q96DE9	158 aa		13.99	□□□□□ -0.17
PSMC4-205	ENST00000601194	MFSD3	Q96ES6	412 aa		13.99	□□□□□ -0.17
PSMC4-205	ENST00000601194	RUNDC3B	Q96NL0	473 aa		13.99	□□□□□ -0.17
PSMC4-205	ENST00000601194	CCM2	Q9BSQ5	444 aa		13.99	□□□□□ -0.17
PSMC4-205	ENST00000601194	TBC1D10A	Q9BXI6	508 aa		13.99	□□□□□ -0.17
PSMC4-205	ENST00000601194	STRADB	Q9C0K7	418 aa		13.99	□□□□□ -0.17
PSMC4-205	ENST00000601194	SEMA6C	Q9H3T2	930 aa		13.99	□□□□□ -0.17
PSMC4-205	ENST00000601194	VPS37B	Q9H9H4	285 aa		13.99	□□□□□ -0.17
PSMC4-205	ENST00000601194	EPB41L5	Q9HCM4	733 aa		13.99	□□□□□ -0.17
PSMC4-205	ENST00000601194	SLC40A1	Q9NP59	571 aa		13.99	□□□□□ -0.17
PSMC4-205	ENST00000601194	CATSPERZ	Q9NTU4	200 aa		13.99	□□□□□ -0.17
PSMC4-205	ENST00000601194	ZMIZ1	Q9ULJ6	1067 aa		13.99	□□□□□ -0.17
PSMC4-205	ENST00000601194	PCDHGA8	Q9Y5G5	932 aa		13.99	□□□□□ -0.17
PSMC4-205	ENST00000601194	PRSS21	Q9Y6M0	314 aa		13.99	□□□□□ -0.17
PSMC4-205	ENST00000601194	KMT2B	Q9UMN6	2715 aa	Predicted RBP	13.99	□□□□□ -0.17
PSMC4-205	ENST00000601194	PKD1L2	Q7Z442	2459 aa		13.98	□□□□□ -0.17
PSMC4-205	ENST00000601194	IGHV5-10-1	A0A0J9YXX1	117 aa		13.98	□□□□□ -0.17
PSMC4-205	ENST00000601194	SDR42E2	A6NKP2	422 aa		13.98	□□□□□ -0.17
PSMC4-205	ENST00000601194	CCDC188	H7C350	402 aa		13.98	□□□□□ -0.17
PSMC4-205	ENST00000601194	DNALI1	O14645	258 aa	Predicted RBP	13.98	□□□□□ -0.17
PSMC4-205	ENST00000601194	DUX1	O43812	170 aa		13.98	□□□□□ -0.17
PSMC4-205	ENST00000601194	OR1I1	O60431	355 aa		13.98	□□□□□ -0.17
PSMC4-205	ENST00000601194	GSTM1	P09488	218 aa		13.98	□□□□□ -0.17
PSMC4-205	ENST00000601194	MTHFD1	P11586	935 aa	Known RBP	13.98	□□□□□ -0.17
PSMC4-205	ENST00000601194	CASQ1	P31415	396 aa		13.98	□□□□□ -0.17
PSMC4-205	ENST00000601194	DR1	Q01658	176 aa		13.98	□□□□□ -0.17
PSMC4-205	ENST00000601194	GSTM4	Q03013	218 aa		13.98	□□□□□ -0.17
PSMC4-205	ENST00000601194	EIF3I	Q13347	325 aa	Known RBP	13.98	□□□□□ -0.17
PSMC4-205	ENST00000601194	GPR18	Q14330	331 aa		13.98	□□□□□ -0.17
PSMC4-205	ENST00000601194	AARS2	Q5JTZ9	985 aa	Known RBP	13.98	□□□□□ -0.17
PSMC4-205	ENST00000601194	PHF19	Q5T6S3	580 aa		13.98	□□□□□ -0.17
PSMC4-205	ENST00000601194	CASC4	Q6P4E1	433 aa		13.98	□□□□□ -0.17
PSMC4-205	ENST00000601194	IGF2-AS	Q6U949	168 aa		13.98	□□□□□ -0.17
PSMC4-205	ENST00000601194	CES3	Q6UWW8	571 aa		13.98	□□□□□ -0.17
PSMC4-205	ENST00000601194	SYT10	Q6XYQ8	523 aa		13.98	□□□□□ -0.17
PSMC4-205	ENST00000601194	SYDE1	Q6ZW31	735 aa	Predicted RBP	13.98	□□□□□ -0.17
PSMC4-205	ENST00000601194	JAML	Q86YT9	394 aa		13.98	□□□□□ -0.17
PSMC4-205	ENST00000601194	RBM12B	Q8IXT5	1001 aa	Known RBP	13.98	□□□□□ -0.17
PSMC4-205	ENST00000601194	CFAP206	Q8IYR0	622 aa		13.98	□□□□□ -0.17
PSMC4-205	ENST00000601194	AGGF1	Q8N302	714 aa	eCLIP	13.98	□□□□□ -0.17
PSMC4-205	ENST00000601194	SPDYE1	Q8NFV5	336 aa	Predicted RBP	13.98	□□□□□ -0.17
PSMC4-205	ENST00000601194	GPR150	Q8NGU9	434 aa		13.98	□□□□□ -0.17
PSMC4-205	ENST00000601194	WDR36	Q8NI36	951 aa	Known RBP	13.98	□□□□□ -0.17
PSMC4-205	ENST00000601194	PRR11	Q96HE9	360 aa	Predicted RBP	13.98	□□□□□ -0.17
PSMC4-205	ENST00000601194	AHCYL2	Q96HN2	611 aa	Known RBP	13.98	□□□□□ -0.17
PSMC4-205	ENST00000601194	RMDN2	Q96LZ7	410 aa		13.98	□□□□□ -0.17
PSMC4-205	ENST00000601194	TTC1	Q99614	292 aa		13.98	□□□□□ -0.17
PSMC4-205	ENST00000601194	DPYSL5	Q9BPU6	564 aa		13.98	□□□□□ -0.17
PSMC4-205	ENST00000601194	TRIM56	Q9BRZ2	755 aa	Known RBP	13.98	□□□□□ -0.17
PSMC4-205	ENST00000601194	WWP1	Q9H0M0	922 aa		13.98	□□□□□ -0.17
PSMC4-205	ENST00000601194	EPB41L1	Q9H4G0	881 aa		13.98	□□□□□ -0.17
PSMC4-205	ENST00000601194	COG4	Q9H9E3	785 aa		13.98	□□□□□ -0.17
PSMC4-205	ENST00000601194	TMEM9	Q9P0T7	183 aa		13.98	□□□□□ -0.17
PSMC4-205	ENST00000601194	DSP	P15924	2871 aa	Known RBP	13.97	□□□□□ -0.17
PSMC4-205	ENST00000601194	QSOX1	O00391	747 aa		13.97	□□□□□ -0.17
PSMC4-205	ENST00000601194	PLD2	O14939	933 aa		13.97	□□□□□ -0.17
PSMC4-205	ENST00000601194	CD3EAP	O15446	510 aa	Known RBP	13.97	□□□□□ -0.17
PSMC4-205	ENST00000601194	VAPB	O95292	243 aa		13.97	□□□□□ -0.17
PSMC4-205	ENST00000601194	POLB	P06746	335 aa		13.97	□□□□□ -0.17
PSMC4-205	ENST00000601194	SLC35G4	P0C7Q5	338 aa		13.97	□□□□□ -0.17
PSMC4-205	ENST00000601194	THRA	P10827	490 aa		13.97	□□□□□ -0.17
PSMC4-205	ENST00000601194	TTPA	P49638	278 aa		13.97	□□□□□ -0.17
PSMC4-205	ENST00000601194	LIMK2	P53671	638 aa		13.97	□□□□□ -0.17
PSMC4-205	ENST00000601194	KIAA0930	Q6ICG6	404 aa	Predicted RBP	13.97	□□□□□ -0.17
PSMC4-205	ENST00000601194	CAPRIN2	Q6IMN6	1127 aa	Known RBP	13.97	□□□□□ -0.17
PSMC4-205	ENST00000601194	WDR74	Q6RFH5	385 aa	Predicted RBP	13.97	□□□□□ -0.17
PSMC4-205	ENST00000601194	RAB11FIP2	Q7L804	512 aa		13.97	□□□□□ -0.17
PSMC4-205	ENST00000601194	LDB1	Q86U70	411 aa	Predicted RBP	13.97	□□□□□ -0.17
PSMC4-205	ENST00000601194	HOOK3	Q86VS8	718 aa		13.97	□□□□□ -0.17
PSMC4-205	ENST00000601194	CCDC74B	Q96LY2	380 aa		13.97	□□□□□ -0.17
PSMC4-205	ENST00000601194	INSM2	Q96T92	566 aa	Predicted RBP	13.97	□□□□□ -0.17
PSMC4-205	ENST00000601194	OR52A5	Q9H2C5	316 aa		13.97	□□□□□ -0.17
PSMC4-205	ENST00000601194	ASCL3	Q9NQ33	180 aa		13.97	□□□□□ -0.17
PSMC4-205	ENST00000601194	IMP3	Q9NV31	184 aa	Known RBP	13.97	□□□□□ -0.17
PSMC4-205	ENST00000601194	OGFR	Q9NZT2	677 aa		13.97	□□□□□ -0.17

Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms