RNA–Protein interactions for RNA: ENST00000596726.3

PNKP-209, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 637 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-209ENST00000596726 ACSL5Q9ULC5 683 aa20.67■□□□□ 0.9
PNKP-209ENST00000596726 PRAMEF33A0A0G2JMD5 474 aa20.66■□□□□ 0.9
PNKP-209ENST00000596726 GOT2P00505 430 aaKnown RBP20.66■□□□□ 0.9
PNKP-209ENST00000596726 THRAP10827 490 aa20.66■□□□□ 0.9
PNKP-209ENST00000596726 RBMS1P29558 406 aaKnown RBP20.66■□□□□ 0.9
PNKP-209ENST00000596726 C16orf72Q14CZ0 275 aa20.66■□□□□ 0.9
PNKP-209ENST00000596726 RPE65Q16518 533 aa20.66■□□□□ 0.9
PNKP-209ENST00000596726 ZNF658BQ4V348 819 aaPredicted RBP20.66■□□□□ 0.9
PNKP-209ENST00000596726 FOXR1Q6PIV2 292 aa20.66■□□□□ 0.9
PNKP-209ENST00000596726 AFTPHQ6ULP2 937 aa20.66■□□□□ 0.9
PNKP-209ENST00000596726 CLEC14AQ86T13 490 aa20.66■□□□□ 0.9
PNKP-209ENST00000596726 CXorf40BQ96DE9 158 aa20.66■□□□□ 0.9
PNKP-209ENST00000596726 CCDC74BQ96LY2 380 aa20.66■□□□□ 0.9
PNKP-209ENST00000596726 THSD1Q9NS62 852 aa20.66■□□□□ 0.9
PNKP-209ENST00000596726 BFARQ9NZS9 450 aa20.66■□□□□ 0.9
PNKP-209ENST00000596726 PSMD13Q9UNM6 376 aa20.66■□□□□ 0.9
PNKP-209ENST00000596726 LOXL2Q9Y4K0 774 aa20.66■□□□□ 0.9
PNKP-209ENST00000596726 ZFHX4Q86UP3 3567 aa20.65■□□□□ 0.9
PNKP-209ENST00000596726 GOLGA6L10A0A0M3HER8 536 aa20.65■□□□□ 0.9
PNKP-209ENST00000596726 HGSO14964 777 aaPredicted RBP20.65■□□□□ 0.9
PNKP-209ENST00000596726 KRT37O76014 449 aa20.65■□□□□ 0.9
PNKP-209ENST00000596726 AP2A2O94973 939 aa20.65■□□□□ 0.9
PNKP-209ENST00000596726 TNFSF15O95150 251 aa20.65■□□□□ 0.9
PNKP-209ENST00000596726 ITGA2BP08514 1039 aa20.65■□□□□ 0.9
PNKP-209ENST00000596726 HGFP14210 728 aa20.65■□□□□ 0.9
PNKP-209ENST00000596726 CRADDP78560 199 aa20.65■□□□□ 0.9
PNKP-209ENST00000596726 ANKRD22Q5VYY1 191 aa20.65■□□□□ 0.9
PNKP-209ENST00000596726 PACS1Q6VY07 963 aa20.65■□□□□ 0.9
PNKP-209ENST00000596726 CLDN19Q8N6F1 224 aa20.65■□□□□ 0.9
PNKP-209ENST00000596726 OR4L1Q8NH43 312 aa20.65■□□□□ 0.9
PNKP-209ENST00000596726 HM13Q8TCT9 377 aa20.65■□□□□ 0.9
PNKP-209ENST00000596726 GRK7Q8WTQ7 553 aa20.65■□□□□ 0.9
PNKP-209ENST00000596726 CPT1BQ92523 772 aa20.65■□□□□ 0.9
PNKP-209ENST00000596726 CMKLR1Q99788 373 aa20.65■□□□□ 0.9
PNKP-209ENST00000596726 CCM2Q9BSQ5 444 aa20.65■□□□□ 0.9
PNKP-209ENST00000596726 KIFC1Q9BW19 673 aa20.65■□□□□ 0.9
PNKP-209ENST00000596726 KCND1Q9NSA2 647 aa20.65■□□□□ 0.9
PNKP-209ENST00000596726 TREX1Q9NSU2 369 aa20.65■□□□□ 0.9
PNKP-209ENST00000596726 OGFRQ9NZT2 677 aa20.65■□□□□ 0.9
PNKP-209ENST00000596726 ADAMTS20P59510 1910 aa20.65■□□□□ 0.9
PNKP-209ENST00000596726 MGAT1P26572 445 aa20.64■□□□□ 0.89
PNKP-209ENST00000596726 NSG1P42857 185 aa20.64■□□□□ 0.89
PNKP-209ENST00000596726 GPR18Q14330 331 aa20.64■□□□□ 0.89
PNKP-209ENST00000596726 LYPLAL1Q5VWZ2 237 aa20.64■□□□□ 0.89
PNKP-209ENST00000596726 CAPRIN2Q6IMN6 1127 aaKnown RBP20.64■□□□□ 0.89
PNKP-209ENST00000596726 CFAP206Q8IYR0 622 aa20.64■□□□□ 0.89
PNKP-209ENST00000596726 LILRA3Q8N6C8 439 aaPredicted RBP20.64■□□□□ 0.89
PNKP-209ENST00000596726 RCBTB1Q8NDN9 531 aa20.64■□□□□ 0.89
PNKP-209ENST00000596726 GPR150Q8NGU9 434 aa20.64■□□□□ 0.89
PNKP-209ENST00000596726 OR6P1Q8NGX9 317 aa20.64■□□□□ 0.89
PNKP-209ENST00000596726 NCSTNQ92542 709 aa20.64■□□□□ 0.89
PNKP-209ENST00000596726 TBRG4Q969Z0 631 aaKnown RBP eCLIP20.64■□□□□ 0.89
PNKP-209ENST00000596726 INSM2Q96T92 566 aaPredicted RBP20.64■□□□□ 0.89
PNKP-209ENST00000596726 NAPGQ99747 312 aaPredicted RBP20.64■□□□□ 0.89
PNKP-209ENST00000596726 WWP1Q9H0M0 922 aa20.64■□□□□ 0.89
PNKP-209ENST00000596726 MRM3Q9HC36 420 aaKnown RBP20.64■□□□□ 0.89
PNKP-209ENST00000596726 SYBUQ9NX95 663 aa20.64■□□□□ 0.89
PNKP-209ENST00000596726 PRSS21Q9Y6M0 314 aa20.64■□□□□ 0.89
PNKP-209ENST00000596726 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP20.64■□□□□ 0.89
PNKP-209ENST00000596726 TMEM63AO94886 807 aa20.63■□□□□ 0.89
PNKP-209ENST00000596726 GSTM1P09488 218 aa20.63■□□□□ 0.89
PNKP-209ENST00000596726 MTHFD1P11586 935 aaKnown RBP20.63■□□□□ 0.89
PNKP-209ENST00000596726 ITIH1P19827 911 aa20.63■□□□□ 0.89
PNKP-209ENST00000596726 MPSTP25325 297 aa20.63■□□□□ 0.89
PNKP-209ENST00000596726 ETV5P41161 510 aa20.63■□□□□ 0.89
PNKP-209ENST00000596726 PCBP4P57723 403 aaKnown RBP20.63■□□□□ 0.89
PNKP-209ENST00000596726 PRAMEP78395 509 aa20.63■□□□□ 0.89
PNKP-209ENST00000596726 SARNPP82979 210 aaKnown RBP20.63■□□□□ 0.89
PNKP-209ENST00000596726 GSTM4Q03013 218 aa20.63■□□□□ 0.89
PNKP-209ENST00000596726 SEMA3AQ14563 771 aa20.63■□□□□ 0.89
PNKP-209ENST00000596726 ARMC3Q5W041 872 aa20.63■□□□□ 0.89
PNKP-209ENST00000596726 CERS6Q6ZMG9 384 aa20.63■□□□□ 0.89
PNKP-209ENST00000596726 CAND1Q86VP6 1230 aaKnown RBP20.63■□□□□ 0.89
PNKP-209ENST00000596726 CREG2Q8IUH2 290 aa20.63■□□□□ 0.89
PNKP-209ENST00000596726 MCUQ8NE86 351 aa20.63■□□□□ 0.89
PNKP-209ENST00000596726 COG4Q9H9E3 785 aa20.63■□□□□ 0.89
PNKP-209ENST00000596726 VPS37BQ9H9H4 285 aa20.63■□□□□ 0.89
PNKP-209ENST00000596726 PISDQ9UG56 409 aa20.63■□□□□ 0.89
PNKP-209ENST00000596726 PCDHGA7Q9Y5G6 932 aa20.63■□□□□ 0.89
PNKP-209ENST00000596726 CFAP47Q6ZTR5 3102 aa20.63■□□□□ 0.89
PNKP-209ENST00000596726 MN1Q10571 1320 aaPredicted RBP20.62■□□□□ 0.89
PNKP-209ENST00000596726 QSOX1O00391 747 aa20.62■□□□□ 0.89
PNKP-209ENST00000596726 FANCGO15287 622 aa20.62■□□□□ 0.89
PNKP-209ENST00000596726 UBXN7O94888 489 aa20.62■□□□□ 0.89
PNKP-209ENST00000596726 POLBP06746 335 aa20.62■□□□□ 0.89
PNKP-209ENST00000596726 JMJD7P0C870 316 aa20.62■□□□□ 0.89
PNKP-209ENST00000596726 NMBRP28336 390 aa20.62■□□□□ 0.89
PNKP-209ENST00000596726 MAPK9P45984 424 aa20.62■□□□□ 0.89
PNKP-209ENST00000596726 TERF1P54274 439 aa20.62■□□□□ 0.89
PNKP-209ENST00000596726 ARHGAP22Q7Z5H3 698 aa20.62■□□□□ 0.89
PNKP-209ENST00000596726 ZNF248Q8NDW4 579 aa20.62■□□□□ 0.89
PNKP-209ENST00000596726 SPDYE1Q8NFV5 336 aaPredicted RBP20.62■□□□□ 0.89
PNKP-209ENST00000596726 SLCO2A1Q92959 643 aa20.62■□□□□ 0.89
PNKP-209ENST00000596726 RMDN2Q96LZ7 410 aa20.62■□□□□ 0.89
PNKP-209ENST00000596726 DCBLD2Q96PD2 775 aa20.62■□□□□ 0.89
PNKP-209ENST00000596726 DDX47Q9H0S4 455 aaKnown RBP20.62■□□□□ 0.89
PNKP-209ENST00000596726 AKAP7Q9P0M2 348 aaPredicted RBP20.62■□□□□ 0.89
PNKP-209ENST00000596726 FAM8A1Q9UBU6 413 aa20.62■□□□□ 0.89
PNKP-209ENST00000596726 PCYOX1Q9UHG3 505 aa20.62■□□□□ 0.89
PNKP-209ENST00000596726 SOX13Q9UN79 622 aa20.62■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms